Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 7.0e-165 583.9 311 100.0
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 5.7e-114 414.8 400 64.8
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 5.7e-114 414.8 400 64.5
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 1.5e-111 406.8 391 64.7
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 9.5e-69 264.6 405 49.6
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 3.6e-68 262.7 405 49.4
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 1.0e-67 261.2 404 49.3
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 2.4e-48 196.8 374 39.8
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 3.2e-48 196.4 364 40.9
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 1.2e-47 194.5 408 39.5
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 1.1e-43 181.4 400 37.2
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 5.2e-43 179.1 423 36.9
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 6.8e-43 178.7 395 38.0
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 1.5e-42 177.6 396 37.9
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 1.7e-41 174.1 416 36.5
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.7e-41 172.9 383 39.2
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.2e-39 167.9 430 39.1
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.7e-39 166.8 452 37.2
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 7.8e-39 165.2 443 35.9
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.0e-38 164.9 433 37.4
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.0e-38 164.9 383 38.1
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 3.0e-38 163.3 400 36.2
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.2e-36 157.9 391 37.1
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 1.6e-36 157.5 383 37.3
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.6e-36 156.4 452 36.5
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 2.9e-33 146.7 403 34.7
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 4.0e-27 126.3 352 33.8
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 4.4e-26 122.9 393 32.1
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 4.4e-26 122.9 383 35.0
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 1.2e-23 114.8 379 32.7
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 1.7e-22 110.9 321 33.0
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.7e-22 110.9 382 30.6
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 3.9e-22 109.8 379 34.0
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 5.1e-22 109.4 378 31.7
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 1.5e-21 107.8 419 29.4
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.5e-21 107.8 345 32.8
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.5e-21 107.8 345 32.8
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 2.4e-19 100.5 406 28.8
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 9.0e-19 98.6 335 31.3
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 2.9e-17 93.6 322 34.5
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 1.1e-16 91.7 387 32.6
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 1.4e-16 91.3 385 30.9
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.4e-16 91.3 281 33.8
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 3.2e-16 90.1 291 31.6
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 5.5e-16 89.4 392 27.3
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 3.5e-15 86.7 407 28.7
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 4.6e-15 86.3 324 32.1
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 7.9e-15 85.5 269 30.1
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 1.5e-13 81.3 316 29.7
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 2.5e-13 80.5 271 30.3
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 3.3e-13 80.1 398 29.9
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 7.4e-13 79.0 340 29.4
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 9.6e-13 78.6 377 30.2
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 1.3e-12 78.2 308 29.5
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 1.6e-12 77.8 305 28.9
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 2.8e-12 77.0 305 28.9
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 6.2e-12 75.9 228 30.3
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 6.2e-12 75.9 382 27.7
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.4e-11 74.7 281 28.5
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 2.4e-11 73.9 143 42.7
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 3.1e-11 73.6 396 26.5
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 5.3e-11 72.8 295 28.5
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 5.3e-11 72.8 233 30.5
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 6.9e-11 72.4 298 29.2
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 6.9e-11 72.4 381 29.1
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.2e-10 71.6 121 42.1
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 1.5e-10 71.2 132 37.1
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 1.3e-09 68.2 141 38.3
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 3.8e-09 66.6 263 31.2
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 8.4e-09 65.5 297 27.6
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 2.5e-08 63.9 130 36.9
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 9.3e-08 62.0 145 34.5
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 9.3e-08 62.0 145 34.5
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 3.5e-07 60.1 362 26.0
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 4.6e-07 59.7 379 28.0
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 2.3e-06 57.4 295 27.8
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 2.3e-06 57.4 181 29.3
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.3e-06 57.4 133 34.6
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 3.9e-06 56.6 135 34.8
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 3.9e-06 56.6 284 28.9
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 6.7e-06 55.8 164 32.9
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 8.7e-06 55.5 249 29.3


User provided reference genes

Program Settings