Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p033186 Quercus lobata HOM05D003146 ORTHO05D001819 8.9e-96 353.6 178 100.0
QL04p032132 Quercus lobata HOM05D003146 ORTHO05D001819 3.9e-91 338.2 179 96.6
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 7.6e-47 191.0 163 63.2
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 1.4e-40 170.2 163 57.1
QL04p005661 Quercus lobata HOM05D003146 ORTHO05D001819 1.0e-27 127.5 178 48.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.4e-24 116.3 157 42.7
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.2e-22 109.8 182 39.0
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.9e-21 106.7 166 39.8
QL04p005657 Quercus lobata HOM05D003146 ORTHO05D001819 2.5e-21 106.3 150 46.7
QL04p005649 Quercus lobata HOM05D003146 ORTHO05D001819 2.1e-20 103.2 179 44.1
QL04p007240 Quercus lobata HOM05D003146 ORTHO05D001819 6.7e-19 98.2 183 35.0
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 3.3e-18 95.9 175 34.9
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 3.3e-18 95.9 175 34.9
QL04p007226 Quercus lobata HOM05D003146 ORTHO05D001819 2.8e-17 92.8 183 35.5
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 3.1e-16 89.4 170 33.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-15 87.0 169 33.7
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.6e-15 86.3 162 34.0
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 1.1e-13 80.9 173 35.8
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.4e-13 80.5 149 34.9
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.5e-13 79.7 168 31.5
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 5.5e-13 78.6 175 32.0
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 4.7e-12 75.5 174 31.0
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.1e-12 75.1 175 30.3
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 8.0e-12 74.7 171 32.7
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.4e-11 73.9 169 29.0
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.4e-11 73.9 150 30.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.8e-11 73.6 154 33.1
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 5.2e-11 72.0 176 29.0
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-11 71.2 153 30.7
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.1e-10 70.9 166 30.1
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-10 70.9 170 28.2
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-10 70.5 170 29.4
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.0e-10 70.1 170 28.2
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 2.0e-10 70.1 181 29.8
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 2.6e-10 69.7 174 31.0
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 4.4e-10 68.9 157 31.2
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 5.7e-10 68.6 140 32.9
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 7.4e-10 68.2 150 28.0
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.7e-10 67.8 170 27.6
Ciclev10010801m.g Citrus clementina HOM05D009438 ORTHO05D001819 1.3e-09 67.4 151 32.5
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.3e-09 67.4 133 33.8
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.3e-09 67.4 133 33.8
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.8e-09 66.2 170 27.6
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 2.8e-09 66.2 143 29.4
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-08 64.3 126 31.7
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 1.8e-08 63.5 160 31.9
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 3.1e-08 62.8 150 26.7
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 3.1e-08 62.8 154 28.6
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 4.1e-08 62.4 175 25.7
TWI09G1173 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 4.1e-08 62.4 123 34.1
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 5.3e-08 62.0 150 26.0
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 5.3e-08 62.0 177 29.4
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 7.0e-08 61.6 150 26.7
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 7.0e-08 61.6 140 31.4
Aqoxy7G04181 Aquilegia oxysepala HOM05D001445 ORTHO05D003404 9.1e-08 61.2 166 25.3
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 9.1e-08 61.2 150 26.0
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 9.1e-08 61.2 150 26.0
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.1e-08 61.2 144 27.1
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 1.2e-07 60.8 167 27.5
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.2e-07 60.8 180 30.0
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 1.6e-07 60.5 136 27.9
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.0e-07 60.1 101 33.7
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 2.0e-07 60.1 160 29.4
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 2.0e-07 60.1 122 33.6
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 2.6e-07 59.7 150 25.3
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 2.6e-07 59.7 148 27.0
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 2.6e-07 59.7 141 31.2
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 3.5e-07 59.3 150 25.3
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 3.5e-07 59.3 150 25.3
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 3.5e-07 59.3 126 30.2
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 3.5e-07 59.3 130 30.0
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.5e-07 59.3 146 32.2
Actinidia28299 Actinidia chinensis HOM05D003146 ORTHO05D001819 4.5e-07 58.9 121 34.7
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.5e-07 58.9 144 26.4
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 4.5e-07 58.9 152 29.6
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 4.5e-07 58.9 148 29.1
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 5.9e-07 58.5 141 29.1
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 7.7e-07 58.2 155 28.4
Ah.01g010410 Amaranthus hybridus HOM05D001445 ORTHO05D001261 7.7e-07 58.2 101 38.6
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 7.7e-07 58.2 135 28.9
Rhsim01G0143600 Rhododendron simsii HOM05D001445 ORTHO05D001261 7.7e-07 58.2 151 32.5
Thecc.05G326500 Theobroma cacao HOM05D011459 ORTHO05D013640 7.7e-07 58.2 149 26.8
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 1.0e-06 57.8 157 28.7
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 1.0e-06 57.8 148 26.4
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 1.0e-06 57.8 168 28.0
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 1.0e-06 57.8 149 27.5
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 1.0e-06 57.8 170 24.1
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.0e-06 57.8 170 27.1
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 1.3e-06 57.4 179 26.3
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.3e-06 57.4 148 31.1
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.3e-06 57.4 132 28.8
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.7e-06 57.0 173 27.7
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 1.7e-06 57.0 163 30.7
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 1.7e-06 57.0 150 30.0
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.7e-06 57.0 152 27.0
MBI19_g19941_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 1.7e-06 57.0 172 30.8
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 1.7e-06 57.0 148 24.3
MBI19_g19942_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 2.2e-06 56.6 172 30.8
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.2e-06 56.6 143 29.4
THA.LOC104801632 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.2e-06 56.6 156 30.8
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.9e-06 56.2 150 30.0
RcHm_v2.0_Chr6g0294271 Rosa chinensis HOM05D003556 ORTHO05D003404 2.9e-06 56.2 146 26.0
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 3.8e-06 55.8 158 29.7
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 3.8e-06 55.8 147 25.9
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 5.0e-06 55.5 151 28.5
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 5.0e-06 55.5 133 29.3
Sed0025882 Sechium edule HOM05D001445 ORTHO05D001261 5.0e-06 55.5 104 30.8
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 6.5e-06 55.1 135 28.1
Lalb_Chr16g0386171 Lupinus albus HOM05D001445 ORTHO05D001261 6.5e-06 55.1 169 32.5
Psat1g086800 Pisum sativum HOM05D007995 ORTHO05D001819 6.5e-06 55.1 178 27.0
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 6.5e-06 55.1 132 28.8
vmacro21086 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 6.5e-06 55.1 101 34.7
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 8.5e-06 54.7 168 27.4
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 8.5e-06 54.7 102 29.4
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 8.5e-06 54.7 162 29.6
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 8.5e-06 54.7 178 28.7
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 8.5e-06 54.7 167 28.1
TPR.G16193 Trifolium pratense HOM05D007995 ORTHO05D001819 8.5e-06 54.7 140 30.0
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 8.5e-06 54.7 146 29.5


User provided reference genes

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