Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 6.3e-204 713.8 334 100.0
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 2.4e-134 482.6 330 69.1
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 2.2e-132 476.1 330 68.5
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-76 290.4 317 47.9
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.2e-58 231.1 317 42.9
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 8.1e-58 228.4 307 42.7
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 8.9e-57 224.9 286 45.8
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 6.4e-55 218.8 308 41.2
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 1.5e-51 207.6 317 39.4
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 2.8e-50 203.4 314 38.5
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 3.6e-50 203.0 317 38.8
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 8.9e-49 198.4 251 43.0
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 2.4e-46 190.3 322 37.9
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.2e-46 189.5 318 38.4
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.6e-45 187.6 319 38.9
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.4e-41 174.5 310 34.5
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.5e-40 169.5 310 33.9
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.4e-39 165.2 321 34.3
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.6e-37 161.0 326 33.4
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.1e-37 160.6 343 33.8
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 3.5e-37 159.8 331 31.4
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.6e-37 159.5 326 33.7
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.3e-36 157.1 318 31.1
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-35 154.8 227 39.2
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.5e-35 154.5 326 31.6
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.8e-34 149.4 361 29.1
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 6.2e-34 149.1 309 29.4
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 1.4e-33 147.9 352 28.4
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 3.1e-33 146.7 309 29.1
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.2e-32 144.8 331 32.9
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 9.9e-32 141.7 280 31.1
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.1e-30 138.3 326 30.4
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.2e-30 136.3 313 31.9
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 7.1e-30 135.6 318 28.9
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 3.5e-29 133.3 339 28.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.8e-28 131.0 307 29.6
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.0e-28 130.2 331 28.7
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 3.0e-28 130.2 251 34.7
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.7e-28 129.0 327 29.4
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.1e-27 128.3 339 30.1
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.3e-27 126.3 316 28.2
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.3e-27 126.3 281 32.0
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.8e-26 122.9 326 27.6
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 6.2e-26 122.5 336 30.7
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.2e-26 122.5 358 25.1
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 2.4e-25 120.6 320 28.8
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.0e-25 119.8 331 30.8
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 9.0e-25 118.6 273 31.5
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 1.2e-24 118.2 344 29.7
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 7.6e-24 115.5 334 27.8
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 1.0e-23 115.2 251 32.3
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.1e-22 111.7 336 27.7
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 1.1e-22 111.7 341 27.6
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 1.6e-21 107.8 331 27.5
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-21 105.9 357 26.1
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.0e-21 105.9 348 25.0
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-20 104.8 358 26.8
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-20 104.8 369 27.4
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-20 104.4 349 27.5
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 2.3e-20 104.0 328 26.5
Aqoxy4G02343 Aquilegia oxysepala HOM05D007354 ORTHO05D006294 3.0e-20 103.6 331 28.4
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.0e-20 103.6 268 30.6
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 3.9e-20 103.2 157 37.6
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 6.7e-20 102.4 389 26.2
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.1e-19 101.7 306 26.5
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-19 101.7 342 26.3
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 4.3e-19 99.8 356 25.3
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 7.4e-19 99.0 155 38.7
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 2.1e-18 97.4 355 25.6
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 2.8e-18 97.1 311 28.0
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-18 97.1 358 27.7
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.2e-18 95.5 171 35.1
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 8.2e-18 95.5 382 25.1
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.1e-17 95.1 326 26.7
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-17 94.0 374 24.6
QL04p066901 Quercus lobata HOM05D007354 ORTHO05D006294 6.9e-17 92.4 120 39.2
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.5e-16 91.3 355 23.9
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 1.5e-16 91.3 327 25.1
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.0e-16 90.9 296 26.0
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-16 90.9 348 24.4
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 2.6e-16 90.5 322 25.8
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.6e-16 90.5 130 36.9
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-16 90.1 388 25.3
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 5.9e-16 89.4 304 27.0
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 7.6e-16 89.0 98 41.8
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.0e-15 88.6 325 27.7
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.3e-15 88.2 309 26.9
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-15 88.2 383 24.0
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 1.3e-15 88.2 344 27.6
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.9e-15 87.0 333 26.7
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 2.9e-15 87.0 344 27.3
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.9e-15 87.0 220 27.3
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 6.5e-15 85.9 344 27.3
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 8.5e-15 85.5 380 23.2
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 1.1e-14 85.1 102 45.1
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 4.2e-14 83.2 363 24.5
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.2e-14 82.4 123 34.1
PSO302G0092 Papaver somniferum HOM05D003035 ORTHO05D000440 9.3e-14 82.0 231 25.5
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 9.3e-14 82.0 368 24.5
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 9.3e-14 82.0 103 38.8
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 9.3e-14 82.0 333 26.4
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 1.2e-13 81.6 117 43.6
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 1.6e-13 81.3 317 26.8
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 2.1e-13 80.9 204 31.4
COL.COLO4_22279 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.7e-13 80.5 148 39.2
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 4.6e-13 79.7 99 40.4
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 6.1e-13 79.3 99 37.4
PSO339G5542 Papaver somniferum HOM05D003035 ORTHO05D000440 7.9e-13 79.0 213 28.2
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 1.0e-12 78.6 99 40.4
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.0e-12 78.6 204 28.9
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 1.3e-12 78.2 98 37.8
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-12 77.4 327 25.4
PSO063G0728 Papaver somniferum HOM05D003035 ORTHO05D006294 3.0e-12 77.0 143 28.7
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 3.0e-12 77.0 314 24.2
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 3.9e-12 76.6 114 39.5
PSO302G0205 Papaver somniferum HOM05D003035 ORTHO05D006294 6.7e-12 75.9 135 29.6
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.7e-12 75.5 154 33.1
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 8.7e-12 75.5 124 31.5
PSO210G5942 Papaver somniferum HOM05D003035 ORTHO05D000440 8.7e-12 75.5 142 28.2
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 8.7e-12 75.5 128 33.6
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.1e-11 75.1 150 34.7
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-11 74.3 341 24.0
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 1.9e-11 74.3 123 33.3
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 3.3e-11 73.6 128 31.2
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 4.3e-11 73.2 372 25.8
PSO675G2182 Papaver somniferum HOM05D003035 ORTHO05D000440 4.3e-11 73.2 128 32.8
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 4.3e-11 73.2 339 23.9
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 7.4e-11 72.4 91 36.3
PSO210G2030 Papaver somniferum HOM05D003035 ORTHO05D000440 7.4e-11 72.4 135 26.7
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.7e-11 72.0 336 23.5
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-10 71.6 352 23.6
CDE05G0110 Ceratophyllum demersum HOM05D000151 ORTHO05D000074 2.2e-10 70.9 279 23.7
PSO210G4257 Papaver somniferum HOM05D003035 ORTHO05D000440 2.2e-10 70.9 126 27.8
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-10 70.5 94 37.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-10 70.1 330 23.3
MD06G1189300 Malus domestica HOM05D000151 ORTHO05D000074 4.8e-10 69.7 314 23.6
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 4.8e-10 69.7 234 23.9
PSO210G3783 Papaver somniferum HOM05D003035 ORTHO05D006294 4.8e-10 69.7 128 26.6
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 4.8e-10 69.7 94 35.1
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 6.3e-10 69.3 262 26.0
MD14G1196300 Malus domestica HOM05D000151 ORTHO05D000074 6.3e-10 69.3 309 24.6
Aqoxy3G02149 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-10 68.9 162 30.9
Aqoxy3G03918 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-10 68.9 162 30.9
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 8.2e-10 68.9 319 23.8
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 2.4e-09 67.4 116 32.8
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 2.4e-09 67.4 313 21.4
PSO013G0217 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-09 67.4 104 32.7
Prupe.5G188100 Prunus persica HOM05D000151 ORTHO05D000074 2.4e-09 67.4 310 23.5
Sopen09g003390 Solanum pennellii HOM05D007354 ORTHO05D006294 2.4e-09 67.4 207 26.1
Aqoxy3G03018 Aquilegia oxysepala HOM05D007794 ORTHO05D009810 3.1e-09 67.0 120 32.5
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.1e-09 66.6 316 23.4
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.1e-09 66.6 216 26.9
PSO541G3079 Papaver somniferum HOM05D003035 ORTHO05D000440 4.1e-09 66.6 357 23.2
PSO210G1373 Papaver somniferum HOM05D003035 ORTHO05D000440 6.9e-09 65.9 137 26.3
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-08 65.1 103 33.0
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-08 64.3 341 25.8
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 4.5e-08 63.2 337 24.3
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 5.9e-08 62.8 331 21.5
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.9e-08 62.8 112 33.0
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 5.9e-08 62.8 290 25.2
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 5.9e-08 62.8 143 31.5
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.7e-08 62.4 205 30.2
PSO541G1699 Papaver somniferum HOM05D003035 ORTHO05D000440 7.7e-08 62.4 121 30.6
SalBow6G6217 Salvia bowleyana HOM05D000151 ORTHO05D000074 1.0e-07 62.0 298 22.5
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 1.3e-07 61.6 343 21.9
Rhsim01G0008700 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.8e-07 60.1 103 31.1
PSO017G7062 Papaver somniferum HOM05D003035 ORTHO05D000440 5.0e-07 59.7 81 34.6
Ciclev10010650m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.5e-07 59.3 251 23.5
Dinv36205 Davidia involucrata HOM05D001286 ORTHO05D000440 1.1e-06 58.5 73 42.5
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-06 58.5 353 21.8
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-06 58.2 89 38.2
PSO801G0197 Papaver somniferum HOM05D003035 ORTHO05D006294 1.9e-06 57.8 90 34.4
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 4.2e-06 56.6 274 23.7
Sabra15G0044900 Salix brachista HOM05D002125 ORTHO05D002105 4.2e-06 56.6 109 28.4
MBI19_g05425_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.5e-06 56.2 325 23.1
PSO210G0858 Papaver somniferum HOM05D003035 ORTHO05D000440 7.2e-06 55.8 280 25.4


User provided reference genes

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