Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p031441 Quercus lobata HOM05D000056 ORTHO05D000019 3.8e-111 404.8 203 100.0
QL04p032740 Quercus lobata HOM05D000056 ORTHO05D000019 9.0e-52 207.6 361 40.4
QL04p032160 Quercus lobata HOM05D000056 ORTHO05D000019 3.5e-32 142.5 342 33.6
QL04p033214 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-22 110.9 72 73.6
QL04p032072 Quercus lobata HOM05D000056 ORTHO05D000019 7.7e-19 98.2 73 65.8
QL04p033389 Quercus lobata HOM05D000056 ORTHO05D000019 7.9e-16 88.2 96 51.0
Haze_02782 Corylus avellana HOM05D000056 ORTHO05D000019 1.0e-15 87.8 221 34.4
BcaC07g42776 Brassica carinata HOM05D000056 ORTHO05D000019 3.9e-15 85.9 200 34.0
QL04p032361 Quercus lobata HOM05D000056 ORTHO05D000019 3.9e-15 85.9 379 25.3
Haze_02791 Corylus avellana HOM05D000056 ORTHO05D000019 6.7e-15 85.1 225 34.7
QL04p032063 Quercus lobata HOM05D000056 ORTHO05D000019 6.7e-15 85.1 119 44.5
QL04p032007 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-14 84.3 66 63.6
QL04p032310 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-14 84.3 66 63.6
QL04p032395 Quercus lobata HOM05D000056 ORTHO05D000019 1.4e-12 77.4 303 27.4
Haze_02793 Corylus avellana HOM05D000056 ORTHO05D000019 3.1e-12 76.3 211 31.3
QL04p032389 Quercus lobata HOM05D000056 ORTHO05D000019 6.9e-12 75.1 79 48.1
QL04p032422 Quercus lobata HOM05D000056 ORTHO05D000019 9.1e-12 74.7 329 25.5
QL04p032535 Quercus lobata HOM05D000056 ORTHO05D000019 9.1e-12 74.7 328 25.3
QL04p032696 Quercus lobata HOM05D000056 ORTHO05D000019 9.1e-12 74.7 64 59.4
QL04p032705 Quercus lobata HOM05D000056 ORTHO05D000019 9.1e-12 74.7 64 59.4
QL04p032724 Quercus lobata HOM05D000056 ORTHO05D000019 9.1e-12 74.7 64 59.4
Manes.05G052700 Manihot esculenta HOM05D000056 ORTHO05D000019 1.5e-11 73.9 64 60.9
QL04p031462 Quercus lobata HOM05D000056 ORTHO05D000019 1.5e-11 73.9 64 59.4
CiPaw.13G028400 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.7e-11 71.6 291 28.2
CiPaw.14G022400 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.7e-11 71.6 64 57.8
CiPaw.14G023100 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.7e-11 71.6 100 40.0
QL10p050344 Quercus lobata HOM05D000056 ORTHO05D000019 7.7e-11 71.6 267 26.2
BcaB02g07416 Brassica carinata HOM05D000056 ORTHO05D000019 1.3e-10 70.9 260 28.1
MD00G1041300 Malus domestica HOM05D000056 ORTHO05D000019 1.3e-10 70.9 64 57.8
QL04p032442 Quercus lobata HOM05D000056 ORTHO05D000019 2.2e-10 70.1 342 24.3
Prupe.2G125100 Prunus persica HOM05D000056 ORTHO05D000019 3.8e-10 69.3 68 50.0
QL04p031377 Quercus lobata HOM05D000056 ORTHO05D000019 5.0e-10 68.9 100 41.0
QL04p032107 Quercus lobata HOM05D000056 ORTHO05D000019 5.0e-10 68.9 336 24.7
QL04p032552 Quercus lobata HOM05D000056 ORTHO05D000019 5.0e-10 68.9 65 52.3
MD15G1121800 Malus domestica HOM05D000056 ORTHO05D000019 6.5e-10 68.6 173 27.2
QL04p031630 Quercus lobata HOM05D000056 ORTHO05D000019 6.5e-10 68.6 100 43.0
QL04p031816 Quercus lobata HOM05D000056 ORTHO05D000019 6.5e-10 68.6 333 23.7
QL04p031408 Quercus lobata HOM05D000056 ORTHO05D000019 8.5e-10 68.2 121 39.7
Prupe.2G124900 Prunus persica HOM05D000056 ORTHO05D000019 1.1e-09 67.8 64 53.1
QL04p032567 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-09 67.8 333 24.0
Prupe.2G125200 Prunus persica HOM05D000056 ORTHO05D000019 2.5e-09 66.6 64 50.0
QL04p031723 Quercus lobata HOM05D000056 ORTHO05D000019 2.5e-09 66.6 114 35.1
CiPaw.14G022600 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.5e-09 65.5 100 39.0
QL04p033041 Quercus lobata HOM05D000056 ORTHO05D000019 5.5e-09 65.5 66 47.0
QL04p031709 Quercus lobata HOM05D000056 ORTHO05D000019 7.2e-09 65.1 222 27.9
Lj8A677T18 Lonicera japonica HOM05D000056 ORTHO05D000019 9.4e-09 64.7 189 31.2
QL04p033234 Quercus lobata HOM05D000056 ORTHO05D000019 9.4e-09 64.7 101 40.6
Aa31LG10G14670 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.2e-08 64.3 97 42.3
Haze_02774 Corylus avellana HOM05D000056 ORTHO05D000019 1.2e-08 64.3 87 48.3
Aa31LG10G14660 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.6e-08 63.9 96 39.6
Haze_02794 Corylus avellana HOM05D000056 ORTHO05D000019 1.6e-08 63.9 114 38.6
Aa31LG10G14570 Aethionema arabicum HOM05D000056 ORTHO05D000019 2.1e-08 63.5 279 24.0
Ah.11g048020 Amaranthus hybridus HOM05D000056 ORTHO05D000019 2.1e-08 63.5 244 27.0
Haze_06631 Corylus avellana HOM05D000056 ORTHO05D000019 2.1e-08 63.5 189 33.3
QL04p032268 Quercus lobata HOM05D000056 ORTHO05D000019 2.1e-08 63.5 99 45.5
QL04p032508 Quercus lobata HOM05D000056 ORTHO05D000019 2.1e-08 63.5 77 44.2
CiPaw.14G022500 Carya illinoinensis HOM05D000056 ORTHO05D000019 2.7e-08 63.2 100 37.0
Prupe.2G125400 Prunus persica HOM05D000056 ORTHO05D000019 2.7e-08 63.2 66 50.0
QL04p033031 Quercus lobata HOM05D000056 ORTHO05D000019 2.7e-08 63.2 103 43.7
QL04p033072 Quercus lobata HOM05D000056 ORTHO05D000019 3.6e-08 62.8 105 38.1
QL04p033174 Quercus lobata HOM05D000056 ORTHO05D000019 3.6e-08 62.8 64 50.0
CARHR140170 Cardamine hirsuta HOM05D000056 ORTHO05D000019 4.7e-08 62.4 308 26.0
Ciclev10015331m.g Citrus clementina HOM05D000056 ORTHO05D000019 4.7e-08 62.4 162 30.9
Haze_01691 Corylus avellana HOM05D000056 ORTHO05D000019 4.7e-08 62.4 101 37.6
Lj8A683G13 Lonicera japonica HOM05D000056 ORTHO05D000019 4.7e-08 62.4 237 27.8
QL04p032778 Quercus lobata HOM05D000056 ORTHO05D000019 4.7e-08 62.4 147 33.3
QL04p032883 Quercus lobata HOM05D000056 ORTHO05D000019 4.7e-08 62.4 99 38.4
TAR371G1260 Trochodendron aralioides HOM05D000056 ORTHO05D000019 4.7e-08 62.4 225 26.7
QL04p032818 Quercus lobata HOM05D000056 ORTHO05D000019 6.1e-08 62.0 104 40.4
Haze_16377 Corylus avellana HOM05D000056 ORTHO05D000019 7.9e-08 61.6 102 43.1
Sc04g0000890 Simmondsia chinensis HOM05D000056 ORTHO05D000019 7.9e-08 61.6 106 38.7
CiPaw.14G023300 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.0e-07 61.2 100 37.0
Potri.017G024300 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.0e-07 61.2 93 37.6
QL04p032834 Quercus lobata HOM05D000056 ORTHO05D000019 1.0e-07 61.2 100 38.0
CiPaw.13G028500 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.4e-07 60.8 73 49.3
CiPaw.06G176200 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.8e-07 60.5 65 47.7
Lj8A633T5 Lonicera japonica HOM05D000056 ORTHO05D000019 1.8e-07 60.5 190 26.8
Potri.017G024866 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.8e-07 60.5 93 37.6
TPR.G24956 Trifolium pratense HOM05D000056 ORTHO05D000019 1.8e-07 60.5 100 45.0
Aa31LG10G14560 Aethionema arabicum HOM05D000056 ORTHO05D000019 2.3e-07 60.1 92 40.2
arahy.Tifrunner.gnm1.ann1.2597Q1 Arachis hypogaea HOM05D000056 ORTHO05D000019 2.3e-07 60.1 117 35.9
arahy.Tifrunner.gnm1.ann1.M8Q3ZJ Arachis hypogaea HOM05D000056 ORTHO05D000019 2.3e-07 60.1 117 35.9
Manes.05G030600 Manihot esculenta HOM05D000056 ORTHO05D000019 2.3e-07 60.1 102 38.2
QL04p032797 Quercus lobata HOM05D000056 ORTHO05D000019 2.3e-07 60.1 101 35.6
QL04p032807 Quercus lobata HOM05D000056 ORTHO05D000019 2.3e-07 60.1 101 35.6
Carub.0004s2754 Capsella rubella HOM05D000056 ORTHO05D000019 3.0e-07 59.7 299 25.1
Haze_02783 Corylus avellana HOM05D000056 ORTHO05D000019 3.0e-07 59.7 200 29.5
Lj3g0020828 Lotus japonicus HOM05D000056 ORTHO05D000019 3.0e-07 59.7 111 40.5
Manes.05G030800 Manihot esculenta HOM05D000056 ORTHO05D000019 3.0e-07 59.7 102 38.2
QL04p031889 Quercus lobata HOM05D000056 ORTHO05D000019 3.0e-07 59.7 108 34.3
QL04p032612 Quercus lobata HOM05D000056 ORTHO05D000019 3.0e-07 59.7 108 34.3
QL04p032953 Quercus lobata HOM05D000056 ORTHO05D000019 3.0e-07 59.7 170 30.6
CANSAT54G2107 Cannabis sativa HOM05D000056 ORTHO05D000019 3.9e-07 59.3 72 43.1
Haze_02799 Corylus avellana HOM05D000056 ORTHO05D000019 3.9e-07 59.3 101 43.6
Lalb_Chr07g0195591 Lupinus albus HOM05D000056 ORTHO05D000019 3.9e-07 59.3 109 43.1
QL04p033359 Quercus lobata HOM05D000056 ORTHO05D000019 3.9e-07 59.3 305 25.9
Aa31LG10G14690 Aethionema arabicum HOM05D000056 ORTHO05D000019 5.1e-07 58.9 96 37.5
CiPaw.15G064400 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.1e-07 58.9 101 40.6
Atru.chr2.562 Acer truncatum HOM05D000056 ORTHO05D000019 6.7e-07 58.5 125 36.8
CiPaw.14G023200 Carya illinoinensis HOM05D000056 ORTHO05D000019 6.7e-07 58.5 104 36.5
Glyma.02G078300 Glycine max HOM05D000056 ORTHO05D000019 6.7e-07 58.5 91 44.0
QL04p031788 Quercus lobata HOM05D000056 ORTHO05D000019 6.7e-07 58.5 101 39.6
QL04p033008 Quercus lobata HOM05D000056 ORTHO05D000019 6.7e-07 58.5 102 41.2
VMungo0331G1926 Vigna mungo HOM05D000056 ORTHO05D000019 6.7e-07 58.5 110 40.0
Aa31LG10G14650 Aethionema arabicum HOM05D000056 ORTHO05D000019 8.8e-07 58.2 94 38.3
Aa31LG10G14700 Aethionema arabicum HOM05D000056 ORTHO05D000019 8.8e-07 58.2 96 40.6
RcHm_v2.0_Chr1g0346611 Rosa chinensis HOM05D000056 ORTHO05D000019 8.8e-07 58.2 66 47.0
Aa31LG10G14710 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.1e-06 57.8 92 41.3
AL4G44040 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 1.1e-06 57.8 58 48.3
CiPaw.12G041300 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.8 124 33.1
CiPaw.13G028300 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.8 102 38.2
Haze_02778 Corylus avellana HOM05D000056 ORTHO05D000019 1.1e-06 57.8 216 29.6
FvH4_7g09691 Fragaria vesca HOM05D000056 ORTHO05D000019 1.1e-06 57.8 66 43.9
FAN06G1804 Fragaria x ananassa HOM05D000056 ORTHO05D000019 1.1e-06 57.8 66 43.9
FAN06G3622 Fragaria x ananassa HOM05D000056 ORTHO05D000019 1.1e-06 57.8 66 43.9
Lj6C114T1 Lonicera japonica HOM05D000056 ORTHO05D000019 1.1e-06 57.8 97 40.2
QL04p031569 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-06 57.8 64 45.3
RcHm_v2.0_Chr6g0244001 Rosa chinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.8 91 34.1
RcHm_v2.0_Chr6g0252341 Rosa chinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.8 91 34.1
Aqoxy3G01919 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 1.5e-06 57.4 104 35.6
arahy.Tifrunner.gnm1.ann1.J2F2FY Arachis hypogaea HOM05D000056 ORTHO05D000019 1.5e-06 57.4 92 40.2
Medtr8g005285 Medicago truncatula HOM05D000056 ORTHO05D000019 1.5e-06 57.4 139 36.7
Potri.014G054200 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.5e-06 57.4 64 51.6
arahy.Tifrunner.gnm1.ann1.5WJ68K Arachis hypogaea HOM05D000056 ORTHO05D000019 2.0e-06 57.0 92 40.2
CiPaw.14G023000 Carya illinoinensis HOM05D000056 ORTHO05D000019 2.0e-06 57.0 91 38.5
Haze_02781 Corylus avellana HOM05D000056 ORTHO05D000019 2.0e-06 57.0 97 38.1
Potri.017G019700 Populus trichocarpa HOM05D000056 ORTHO05D000019 2.0e-06 57.0 105 37.1
QL02p103496 Quercus lobata HOM05D000056 ORTHO05D000019 2.0e-06 57.0 95 38.9
Aa31LG10G14730 Aethionema arabicum HOM05D000056 ORTHO05D000019 2.6e-06 56.6 92 43.5
Haze_10053 Corylus avellana HOM05D000056 ORTHO05D000019 2.6e-06 56.6 58 51.7
Eucgr.L03390 Eucalyptus grandis HOM05D000056 ORTHO05D000019 2.6e-06 56.6 104 36.5
Glyma.07G111300 Glycine max HOM05D000056 ORTHO05D000019 2.6e-06 56.6 60 50.0
Hma1.2p1_1782F.1_g302110 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 2.6e-06 56.6 102 39.2
QL04p032904 Quercus lobata HOM05D000056 ORTHO05D000019 2.6e-06 56.6 92 43.5
Aa31LG10G14540 Aethionema arabicum HOM05D000056 ORTHO05D000019 3.3e-06 56.2 92 39.1
BraA09t39793Z Brassica rapa HOM05D000056 ORTHO05D000019 3.3e-06 56.2 148 29.1
Haze_10462 Corylus avellana HOM05D000056 ORTHO05D000019 3.3e-06 56.2 95 35.8
Eucgr.H02583 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.3e-06 56.2 137 29.2
Glyma.07G111500 Glycine max HOM05D000056 ORTHO05D000019 3.3e-06 56.2 105 38.1
Glyma.16G161100 Glycine max HOM05D000056 ORTHO05D000019 3.3e-06 56.2 124 32.3
Lj8C664T7 Lonicera japonica HOM05D000056 ORTHO05D000019 3.3e-06 56.2 87 40.2
Manes.18G082800 Manihot esculenta HOM05D000056 ORTHO05D000019 3.3e-06 56.2 91 39.6
Medtr8g005295 Medicago truncatula HOM05D000056 ORTHO05D000019 3.3e-06 56.2 99 43.4
Phvul.010G052900 Phaseolus vulgaris HOM05D000056 ORTHO05D000019 3.3e-06 56.2 110 38.2
Rhsim02G0195400 Rhododendron simsii HOM05D000056 ORTHO05D000019 3.3e-06 56.2 89 38.2
VMungo0331G1987 Vigna mungo HOM05D000056 ORTHO05D000019 3.3e-06 56.2 104 38.5
EL10Ac7g18087 Beta vulgaris HOM05D000056 ORTHO05D000019 4.4e-06 55.8 106 34.9
BcaB02g08965 Brassica carinata HOM05D000056 ORTHO05D000019 4.4e-06 55.8 60 46.7
C04p05890 Brassica napus HOM05D000056 ORTHO05D000019 4.4e-06 55.8 252 24.2
CiPaw.01G123500 Carya illinoinensis HOM05D000056 ORTHO05D000019 4.4e-06 55.8 111 37.8
Eucgr.H02792 Eucalyptus grandis HOM05D000056 ORTHO05D000019 4.4e-06 55.8 97 38.1
Eucgr.H02801 Eucalyptus grandis HOM05D000056 ORTHO05D000019 4.4e-06 55.8 97 39.2
Lalb_Chr18g0049001 Lupinus albus HOM05D000056 ORTHO05D000019 4.4e-06 55.8 103 39.8
RcHm_v2.0_Chr6g0298271 Rosa chinensis HOM05D000056 ORTHO05D000019 4.4e-06 55.8 99 36.4
Aa31LG10G14610 Aethionema arabicum HOM05D000056 ORTHO05D000019 5.7e-06 55.5 96 38.5
Aqoxy1G01716 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 5.7e-06 55.5 86 36.0
BcaC07g42778 Brassica carinata HOM05D000056 ORTHO05D000019 5.7e-06 55.5 92 40.2
BolC6t37836H Brassica oleracea HOM05D000056 ORTHO05D000019 5.7e-06 55.5 105 40.0
Lj8C650T1 Lonicera japonica HOM05D000056 ORTHO05D000019 5.7e-06 55.5 87 39.1
Lalb_Chr17g0338201 Lupinus albus HOM05D000056 ORTHO05D000019 5.7e-06 55.5 102 35.3
Manes.03G017000 Manihot esculenta HOM05D000056 ORTHO05D000019 5.7e-06 55.5 91 37.4
QL04p032689 Quercus lobata HOM05D000056 ORTHO05D000019 5.7e-06 55.5 51 52.9
Sc22g0004120 Simmondsia chinensis HOM05D000056 ORTHO05D000019 5.7e-06 55.5 106 36.8
Aqoxy5G03453 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 7.4e-06 55.1 108 35.2
BcaC08g45055 Brassica carinata HOM05D000056 ORTHO05D000019 7.4e-06 55.1 105 40.0
BolC6t37838H Brassica oleracea HOM05D000056 ORTHO05D000019 7.4e-06 55.1 105 40.0
Carub.0005s2720 Capsella rubella HOM05D000056 ORTHO05D000019 7.4e-06 55.1 120 35.0
FvH4_2g29500 Fragaria vesca HOM05D000056 ORTHO05D000019 7.4e-06 55.1 93 33.3
Glyma.03G114900 Glycine max HOM05D000056 ORTHO05D000019 7.4e-06 55.1 99 40.4
Lj8C657T0 Lonicera japonica HOM05D000056 ORTHO05D000019 7.4e-06 55.1 87 39.1
Lj8P697T7 Lonicera japonica HOM05D000056 ORTHO05D000019 7.4e-06 55.1 100 36.0
Psat4g225880 Pisum sativum HOM05D000056 ORTHO05D000019 7.4e-06 55.1 99 43.4
QL05p019562 Quercus lobata HOM05D000056 ORTHO05D000019 7.4e-06 55.1 102 40.2
QL09p047416 Quercus lobata HOM05D000056 ORTHO05D000019 7.4e-06 55.1 98 38.8
Rhsim02G0198700 Rhododendron simsii HOM05D000056 ORTHO05D000019 7.4e-06 55.1 89 37.1
GSVIVG01035823001 Vitis vinifera HOM05D000056 ORTHO05D000019 7.4e-06 55.1 110 36.4
A07p25090 Brassica napus HOM05D000056 ORTHO05D000019 9.7e-06 54.7 105 39.0
BraA07t30149Z Brassica rapa HOM05D000056 ORTHO05D000019 9.7e-06 54.7 105 39.0
CiPaw.14G022800 Carya illinoinensis HOM05D000056 ORTHO05D000019 9.7e-06 54.7 130 33.1
Haze_26685 Corylus avellana HOM05D000056 ORTHO05D000019 9.7e-06 54.7 64 50.0
FAN10G3311 Fragaria x ananassa HOM05D000056 ORTHO05D000019 9.7e-06 54.7 57 50.9
FAN24G3204 Fragaria x ananassa HOM05D000056 ORTHO05D000019 9.7e-06 54.7 108 33.3
Manes.12G124700 Manihot esculenta HOM05D000056 ORTHO05D000019 9.7e-06 54.7 60 45.0
Potri.003G206201 Populus trichocarpa HOM05D000056 ORTHO05D000019 9.7e-06 54.7 91 38.5
QL04p032038 Quercus lobata HOM05D000056 ORTHO05D000019 9.7e-06 54.7 56 55.4
QL04p032199 Quercus lobata HOM05D000056 ORTHO05D000019 9.7e-06 54.7 102 39.2
QL04p032243 Quercus lobata HOM05D000056 ORTHO05D000019 9.7e-06 54.7 102 39.2
QL04p032502 Quercus lobata HOM05D000056 ORTHO05D000019 9.7e-06 54.7 115 33.9
RcHm_v2.0_Chr1g0346791 Rosa chinensis HOM05D000056 ORTHO05D000019 9.7e-06 54.7 58 50.0
GSVIVG01035820001 Vitis vinifera HOM05D000056 ORTHO05D000019 9.7e-06 54.7 115 34.8


User provided reference genes

Program Settings