Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p030794 Quercus lobata HOM05D002629 ORTHO05D003221 5.4e-98 361.3 226 100.0
Lj7A544T39 Lonicera japonica HOM05D002629 ORTHO05D003221 1.3e-56 223.8 193 83.4
arahy.Tifrunner.gnm1.ann1.NJU9W5 Arachis hypogaea HOM05D002629 ORTHO05D003221 8.7e-56 221.1 193 82.4
Peaxi162Scf00030g00516 Petunia axillaris HOM05D002629 ORTHO05D003221 1.5e-52 210.3 193 79.3
Oeu063227.1 Olea europaea HOM05D002629 ORTHO05D003221 2.0e-52 209.9 181 69.1
QL04p030868 Quercus lobata HOM05D002629 ORTHO05D003221 1.2e-49 200.7 165 89.1
Hund27403 Selenicereus undatus HOM05D002629 ORTHO05D003221 3.3e-47 192.6 181 63.5
Cpa.g.sc101.20 Carica papaya HOM05D002629 ORTHO05D003221 7.4e-47 191.4 163 71.2
CiPaw.14G021300 Carya illinoinensis HOM05D002629 ORTHO05D003221 8.2e-46 188.0 165 85.5
Haze_02816 Corylus avellana HOM05D002629 ORTHO05D003221 2.4e-45 186.4 174 65.5
CANSAT81G0002 Cannabis sativa HOM05D002629 ORTHO05D003221 3.1e-45 186.0 165 83.6
CiPaw.13G027700 Carya illinoinensis HOM05D002629 ORTHO05D003221 3.1e-45 186.0 165 84.8
Dinv44071 Davidia involucrata HOM05D002629 ORTHO05D003221 2.0e-44 183.3 166 82.5
VMungo1383G0712 Vigna mungo HOM05D002629 ORTHO05D003221 2.0e-44 183.3 165 83.6
Glyma.18G253400 Glycine max HOM05D002629 ORTHO05D003221 2.6e-44 183.0 165 83.6
Actinidia12648 Actinidia chinensis HOM05D002629 ORTHO05D003221 3.4e-44 182.6 165 81.8
Actinidia33500 Actinidia chinensis HOM05D002629 ORTHO05D003221 7.7e-44 181.4 237 62.0
Glyma.09G242200 Glycine max HOM05D002629 ORTHO05D003221 7.7e-44 181.4 165 83.0
GSVIVG01018254001 Vitis vinifera HOM05D002629 ORTHO05D003221 7.7e-44 181.4 237 62.4
Ciclev10018755m.g Citrus clementina HOM05D002629 ORTHO05D003221 1.7e-43 180.3 165 81.8
Dinv43631 Davidia involucrata HOM05D002629 ORTHO05D003221 2.9e-43 179.5 165 81.8
Rhsim01G0138900 Rhododendron simsii HOM05D002629 ORTHO05D003221 3.8e-43 179.1 230 54.8
RcHm_v2.0_Chr1g0347431 Rosa chinensis HOM05D002629 ORTHO05D003221 3.8e-43 179.1 166 81.3
Manes.01G272500 Manihot esculenta HOM05D002629 ORTHO05D003221 6.5e-43 178.3 165 81.8
CSS0031736 Camellia sinensis var. sinensis HOM05D002629 ORTHO05D003221 8.5e-43 177.9 125 80.0
Sabra02G0106100 Salix brachista HOM05D002629 ORTHO05D003221 8.5e-43 177.9 165 81.8
Potri.002G137100 Populus trichocarpa HOM05D002629 ORTHO05D003221 1.1e-42 177.6 165 82.4
COL.COLO4_12423 Corchorus olitorius HOM05D002629 ORTHO05D003221 1.4e-42 177.2 165 81.8
Sc02g0003040 Simmondsia chinensis HOM05D002629 ORTHO05D003221 1.4e-42 177.2 165 81.8
MD07G1104300 Malus domestica HOM05D002629 ORTHO05D003221 1.9e-42 176.8 166 81.3
Potri.014G046000 Populus trichocarpa HOM05D002629 ORTHO05D003221 1.9e-42 176.8 165 82.4
EL10Ac1g00777 Beta vulgaris HOM05D002629 ORTHO05D003221 3.2e-42 176.0 165 82.4
Phvul.008G045600 Phaseolus vulgaris HOM05D002629 ORTHO05D003221 3.2e-42 176.0 165 83.0
arahy.Tifrunner.gnm1.ann1.Z4V8RQ Arachis hypogaea HOM05D002629 ORTHO05D003221 4.2e-42 175.6 165 81.2
FAN06G2173 Fragaria x ananassa HOM05D002629 ORTHO05D003221 5.5e-42 175.3 166 80.1
MD02G1216100 Malus domestica HOM05D002629 ORTHO05D003221 7.2e-42 174.9 166 80.7
TPR.G12223 Trifolium pratense HOM05D002629 ORTHO05D003221 7.2e-42 174.9 165 80.6
Eucgr.D01517 Eucalyptus grandis HOM05D002629 ORTHO05D003221 2.1e-41 173.3 165 79.4
Atru.chr5.154 Acer truncatum HOM05D002629 ORTHO05D003221 2.7e-41 172.9 166 79.5
FAN03G1771 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.7e-41 172.9 166 78.9
FAN10G1673 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.7e-41 172.9 165 80.0
FAN10G1881 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.7e-41 172.9 165 80.0
Lalb_Chr03g0040291 Lupinus albus HOM05D002629 ORTHO05D003221 2.7e-41 172.9 165 80.6
Psat3g195880 Pisum sativum HOM05D002629 ORTHO05D003221 6.1e-41 171.8 165 79.4
Ah.05g173240 Amaranthus hybridus HOM05D002629 ORTHO05D003221 7.9e-41 171.4 177 61.0
Duzib133G0660 Durio zibethinus HOM05D002629 ORTHO05D003221 7.9e-41 171.4 166 80.1
FvH4_7g09880 Fragaria vesca HOM05D002629 ORTHO05D003221 7.9e-41 171.4 166 79.5
Sabra14G0033500 Salix brachista HOM05D002629 ORTHO05D003221 1.0e-40 171.0 165 80.6
Duzib138G1927 Durio zibethinus HOM05D002629 ORTHO05D003221 1.4e-40 170.6 166 80.1
Thecc.01G393100 Theobroma cacao HOM05D002629 ORTHO05D003221 1.4e-40 170.6 166 80.1
Ca_04037_v3 Cicer arietinum L. HOM05D002629 ORTHO05D003221 1.8e-40 170.2 165 78.8
Gohir.D08G040400 Gossypium hirsutum HOM05D002629 ORTHO05D003221 3.9e-40 169.1 165 79.4
Gorai.004G039300 Gossypium raimondii HOM05D002629 ORTHO05D003221 5.1e-40 168.7 166 78.9
THA.LOC104817192 Tarenaya hassleriana HOM05D002629 ORTHO05D003221 5.1e-40 168.7 164 79.9
MSTRG.20699 Avicennia marina HOM05D002629 ORTHO05D003221 6.7e-40 168.3 125 76.8
Migut.B01547 Erythranthe guttata HOM05D002629 ORTHO05D003221 6.7e-40 168.3 165 77.0
Aa31LG1G26430 Aethionema arabicum HOM05D002629 ORTHO05D003221 8.8e-40 167.9 125 78.4
Gohir.A08G029600 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.1e-39 167.5 165 78.8
CAN.G362.8 Capsicum annuum HOM05D002629 ORTHO05D003221 1.5e-39 167.2 165 78.2
Medtr7g007780 Medicago truncatula HOM05D002629 ORTHO05D003221 1.5e-39 167.2 165 78.8
DCAR_029753 Daucus carota HOM05D002629 ORTHO05D003221 3.3e-39 166.0 237 59.1
PGR004G2363 Punica granatum HOM05D002629 ORTHO05D003221 5.7e-39 165.2 125 76.0
Thhalv10001300m.g Eutrema salsugineum HOM05D002629 ORTHO05D003221 1.3e-38 164.1 264 56.4
Nitab4.5_0003696g0020 Nicotiana tabacum HOM05D002629 ORTHO05D003221 1.3e-38 164.1 165 77.6
ECA240G2280 Erigeron canadensis HOM05D002629 ORTHO05D003221 2.2e-38 163.3 125 74.4
Lalb_Chr19g0126581 Lupinus albus HOM05D002629 ORTHO05D003221 2.2e-38 163.3 165 78.2
TAR374G0587 Trochodendron aralioides HOM05D002629 ORTHO05D003221 2.2e-38 163.3 165 78.2
Sed0006090 Sechium edule HOM05D002629 ORTHO05D003221 2.8e-38 162.9 165 77.6
ClCG05G000420 Citrullus lanatus HOM05D002629 ORTHO05D003221 3.7e-38 162.5 165 77.6
MELO3C005980.2 Cucumis melo HOM05D002629 ORTHO05D003221 3.7e-38 162.5 165 77.6
CsaV3_3G007580 Cucumis sativus L. HOM05D002629 ORTHO05D003221 3.7e-38 162.5 165 77.6
Sed0010164 Sechium edule HOM05D002629 ORTHO05D003221 1.1e-37 161.0 165 77.0
Thhalv10005776m.g Eutrema salsugineum HOM05D002629 ORTHO05D003221 3.1e-37 159.5 165 76.4
Gohir.D08G068300 Gossypium hirsutum HOM05D002629 ORTHO05D003221 4.1e-37 159.1 165 73.9
Gorai.004G071500 Gossypium raimondii HOM05D002629 ORTHO05D003221 4.1e-37 159.1 165 73.9
Sp4g26970 Schrenkiella parvula HOM05D002629 ORTHO05D003221 4.1e-37 159.1 167 77.8
HanXRQChr13g0423391 Helianthus annuus HOM05D002629 ORTHO05D003221 6.9e-37 158.3 237 57.4
CARHR140140 Cardamine hirsuta HOM05D002629 ORTHO05D003221 9.1e-37 157.9 126 76.2
Gohir.A08G059100 Gossypium hirsutum HOM05D002629 ORTHO05D003221 9.1e-37 157.9 165 73.3
MSTRG.4927 Avicennia marina HOM05D002629 ORTHO05D003221 1.2e-36 157.5 237 58.2
SpUN0080_0050 Schrenkiella parvula HOM05D002629 ORTHO05D003221 1.2e-36 157.5 165 75.8
Solyc01g090420.4 Solanum lycopersicum HOM05D002629 ORTHO05D003221 1.2e-36 157.5 119 77.3
BcaB06g29404 Brassica carinata HOM05D002629 ORTHO05D003221 1.5e-36 157.1 169 75.7
Migut.N01752 Erythranthe guttata HOM05D002629 ORTHO05D003221 1.5e-36 157.1 238 58.0
Lj1g0021466 Lotus japonicus HOM05D002629 ORTHO05D003221 2.0e-36 156.8 166 74.7
Aqoxy3G02758 Aquilegia oxysepala HOM05D002629 ORTHO05D003221 2.6e-36 156.4 125 73.6
Lsat_1_v5_gn_3_131781 Lactuca sativa HOM05D002629 ORTHO05D003221 2.6e-36 156.4 237 57.4
AL4G43990 Arabidopsis lyrata HOM05D002629 ORTHO05D003221 5.9e-36 155.2 167 76.6
BcaB01g03300 Brassica carinata HOM05D002629 ORTHO05D003221 5.9e-36 155.2 163 60.7
CDE04G1047 Ceratophyllum demersum HOM05D002629 ORTHO05D003221 5.9e-36 155.2 160 60.6
CSS0010116 Camellia sinensis var. sinensis HOM05D002629 ORTHO05D003221 7.7e-36 154.8 237 57.0
SalBow5G1432 Salvia bowleyana HOM05D002629 ORTHO05D003221 7.7e-36 154.8 165 72.7
Os10g0563200 Oryza sativa ssp. japonica HOM05D002629 ORTHO05D003221 1.7e-35 153.7 125 70.4
THA.LOC104802491 Tarenaya hassleriana HOM05D002629 ORTHO05D003221 1.7e-35 153.7 167 75.4
HPP92_014909 Vanilla planifolia HOM05D002629 ORTHO05D003221 1.7e-35 153.7 165 75.2
TAR375G0449 Trochodendron aralioides HOM05D002629 ORTHO05D003221 2.9e-35 152.9 125 74.4
AT2G44900 Arabidopsis thaliana HOM05D002629 ORTHO05D003221 3.8e-35 152.5 167 75.4
Nitab4.5_0003553g0060 Nicotiana tabacum HOM05D002629 ORTHO05D003221 3.8e-35 152.5 195 65.6
TAR375G0872 Trochodendron aralioides HOM05D002629 ORTHO05D003221 8.5e-35 151.4 125 73.6
Zm00001eb023660 Zea mays HOM05D002629 ORTHO05D003221 8.5e-35 151.4 169 69.2
BcaC02g10150 Brassica carinata HOM05D002629 ORTHO05D003221 3.2e-34 149.4 124 71.8
A04p01670 Brassica napus HOM05D002629 ORTHO05D003221 3.2e-34 149.4 124 71.8
C04p32220 Brassica napus HOM05D002629 ORTHO05D003221 3.2e-34 149.4 124 71.8
BolC4t24773H Brassica oleracea HOM05D002629 ORTHO05D003221 3.2e-34 149.4 124 71.8
PSO782G2159 Papaver somniferum HOM05D002629 ORTHO05D003221 3.2e-34 149.4 167 75.4
Sopen01g036210 Solanum pennellii HOM05D002629 ORTHO05D003221 3.2e-34 149.4 119 76.5
Carub.0005s2710 Capsella rubella HOM05D002629 ORTHO05D003221 4.2e-34 149.1 124 71.0
PSO063G0076 Papaver somniferum HOM05D002629 ORTHO05D003221 4.2e-34 149.1 167 75.4
TWI59G0861 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 5.5e-34 148.7 237 56.1
AL5G42590 Arabidopsis lyrata HOM05D002629 ORTHO05D003221 7.2e-34 148.3 262 51.5
AT3G60350 Arabidopsis thaliana HOM05D002629 ORTHO05D003221 9.4e-34 147.9 164 72.0
CARHR170670 Cardamine hirsuta HOM05D002629 ORTHO05D003221 1.6e-33 147.1 167 73.1
Carub.0004s2749 Capsella rubella HOM05D002629 ORTHO05D003221 2.1e-33 146.7 167 74.3
A04p33530 Brassica napus HOM05D002629 ORTHO05D003221 2.7e-33 146.4 167 74.3
CDE12G0117 Ceratophyllum demersum HOM05D002629 ORTHO05D003221 2.7e-33 146.4 119 73.1
TPR.G32620 Trifolium pratense HOM05D002629 ORTHO05D003221 2.7e-33 146.4 125 67.2
C04p71290 Brassica napus HOM05D002629 ORTHO05D003221 3.6e-33 146.0 167 74.3
BolC4t28633H Brassica oleracea HOM05D002629 ORTHO05D003221 3.6e-33 146.0 167 74.3
BraA04t15891Z Brassica rapa HOM05D002629 ORTHO05D003221 4.7e-33 145.6 124 71.0
TWI14G0886 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 4.7e-33 145.6 165 72.1
TWI14G1152 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 4.7e-33 145.6 165 72.1
SGA_v2.0_scaffold153G36913 Striga asiatica HOM05D002629 ORTHO05D003221 7.9e-33 144.8 159 71.7
GSVIVG01013967001 Vitis vinifera HOM05D002629 ORTHO05D003221 1.0e-32 144.4 125 68.0
BraA04t18815Z Brassica rapa HOM05D002629 ORTHO05D003221 1.8e-32 143.7 167 73.7
FAN06G0846 Fragaria x ananassa HOM05D002629 ORTHO05D003221 1.8e-32 143.7 121 71.1
BcaB02g08173 Brassica carinata HOM05D002629 ORTHO05D003221 2.3e-32 143.3 167 71.9
SEGI_03510 Sequoiadendron giganteum HOM05D002629 ORTHO05D003221 2.0e-31 140.2 124 66.9
BcaC02g07120 Brassica carinata HOM05D002629 ORTHO05D003221 2.6e-31 139.8 123 71.5
Atru.chr1.908 Acer truncatum HOM05D002629 ORTHO05D003221 7.4e-31 138.3 123 68.3
unitig_26.g8869 Utricularia gibba HOM05D002629 ORTHO05D003221 9.7e-31 137.9 119 67.2
Actinidia40386 Actinidia chinensis HOM05D002629 ORTHO05D003221 6.3e-30 135.2 193 58.0
Aqoxy7G00845 Aquilegia oxysepala HOM05D002629 ORTHO05D003221 1.1e-29 134.4 119 68.1
TWI59G0032 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 1.4e-29 134.0 107 69.2
Actinidia12151 Actinidia chinensis HOM05D002629 ORTHO05D003221 3.1e-29 132.9 166 67.5
Gohir.A12G096550 Gossypium hirsutum HOM05D002629 ORTHO05D003221 3.1e-29 132.9 238 52.1
vmacro21053 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 3.1e-29 132.9 141 77.3
Cc02_g24970 Coffea canephora HOM05D002629 ORTHO05D003221 2.0e-28 130.2 137 77.4
Gorai.008G108200 Gossypium raimondii HOM05D002629 ORTHO05D003221 3.5e-28 129.4 238 51.7
Sabra01G0056800 Salix brachista HOM05D002629 ORTHO05D003221 3.5e-28 129.4 119 66.4
FAN06G1336 Fragaria x ananassa HOM05D002629 ORTHO05D003221 1.0e-27 127.9 138 78.3
Pp3c4_17860 Physcomitrium patens HOM05D002629 ORTHO05D003221 1.3e-27 127.5 125 61.6
Potri.001G079300 Populus trichocarpa HOM05D002629 ORTHO05D003221 2.2e-27 126.7 119 65.5
vmacro13487 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 2.5e-26 123.2 179 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2598 Anthoceros agrestis HOM05D002629 ORTHO05D003221 7.2e-26 121.7 125 58.4
Manes.14G038600 Manihot esculenta HOM05D002629 ORTHO05D003221 7.2e-26 121.7 237 49.8
Pp3c12_9730 Physcomitrium patens HOM05D002629 ORTHO05D003221 2.1e-25 120.2 125 59.2
Thecc.03G149100 Theobroma cacao HOM05D002629 ORTHO05D003221 2.1e-25 120.2 164 62.8
Mapoly0150s0009 Marchantia polymorpha HOM05D002629 ORTHO05D003221 2.7e-25 119.8 125 57.6
Gohir.D12G099366 Gossypium hirsutum HOM05D002629 ORTHO05D003221 6.1e-25 118.6 118 66.1
Nn1g00881 Nelumbo nucifera HOM05D002629 ORTHO05D003221 1.0e-24 117.9 138 74.6
Aa31LG10G14470 Aethionema arabicum HOM05D002629 ORTHO05D003221 1.8e-24 117.1 157 65.0
Gorai.007G046200 Gossypium raimondii HOM05D002629 ORTHO05D003221 6.7e-24 115.2 125 55.2
Gohir.D11G042900 Gossypium hirsutum HOM05D002629 ORTHO05D003221 2.0e-23 113.6 125 55.2
Gohir.A11G039600 Gossypium hirsutum HOM05D002629 ORTHO05D003221 2.6e-23 113.2 125 55.2
SMO143G0319 Selaginella moellendorffii HOM05D002629 ORTHO05D003221 2.6e-23 113.2 124 58.9
Nn6g33838 Nelumbo nucifera HOM05D002629 ORTHO05D003221 9.7e-23 111.3 94 72.3
ATR0057G096 Amborella trichopoda HOM05D002629 ORTHO05D003221 4.8e-22 109.0 125 56.0
Duzib068G1177 Durio zibethinus HOM05D002629 ORTHO05D003221 6.3e-22 108.6 121 55.4
DCAR_025070 Daucus carota HOM05D002629 ORTHO05D003221 1.6e-20 104.0 196 39.8
Gohir.A03G059800 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.0e-19 101.3 108 55.6
BcaC07g40426 Brassica carinata HOM05D002629 ORTHO05D003221 1.2e-17 94.4 124 50.8
AUR62013732 Chenopodium quinoa HOM05D002629 ORTHO05D003221 1.6e-17 94.0 125 53.6
Oeu031412.1 Olea europaea HOM05D001586 ORTHO05D001543 8.0e-17 91.7 129 49.6
Gohir.D01G171200 Gossypium hirsutum HOM05D002629 ORTHO05D003221 2.0e-15 87.0 134 43.3
Gorai.006G069100 Gossypium raimondii HOM05D002629 ORTHO05D003221 2.0e-15 87.0 134 43.3
A09p52630 Brassica napus HOM05D002629 ORTHO05D003221 7.5e-15 85.1 162 53.7
COL.COLO4_37342 Corchorus olitorius HOM05D002629 ORTHO05D003221 7.5e-15 85.1 97 50.5
C03p29750 Brassica napus HOM05D002629 ORTHO05D003221 9.8e-15 84.7 75 69.3
BraA09t40692Z Brassica rapa HOM05D002629 ORTHO05D003221 1.7e-14 84.0 162 53.1
BcaC07g40430 Brassica carinata HOM05D002629 ORTHO05D003221 2.2e-14 83.6 122 49.2
SEGI_18219 Sequoiadendron giganteum HOM05D002629 ORTHO05D003221 2.2e-14 83.6 73 61.6
BcaC07g40428 Brassica carinata HOM05D002629 ORTHO05D003221 2.8e-14 83.2 122 48.4
BcaNung06045 Brassica carinata HOM05D002629 ORTHO05D003221 3.7e-14 82.8 122 48.4
BolC8t51129H Brassica oleracea HOM05D002629 ORTHO05D003221 3.7e-14 82.8 122 48.4
BcaC07g42772 Brassica carinata HOM05D002629 ORTHO05D003221 4.8e-14 82.4 116 50.0
vmacro13490 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 6.3e-14 82.0 179 37.4
BolC3t15325H Brassica oleracea HOM05D002629 ORTHO05D003221 8.3e-14 81.6 75 66.7
C08p35360 Brassica napus HOM05D002629 ORTHO05D003221 2.4e-13 80.1 122 47.5
Pp3s1164_10 Physcomitrium patens HOM05D002629 ORTHO05D003221 8.5e-11 71.6 168 36.9
HanXRQChr03g0093221 Helianthus annuus HOM05D002629 ORTHO05D003221 1.5e-10 70.9 100 47.0
FAN01G1804 Fragaria x ananassa HOM05D002629 ORTHO05D003221 1.9e-10 70.5 113 69.9
AUR62023421 Chenopodium quinoa HOM05D002629 ORTHO05D003221 2.7e-09 66.6 57 71.9
vmacro21167 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 4.7e-09 65.9 80 55.0
Cpa.g.sc5743.1 Carica papaya HOM05D002629 ORTHO05D028548 1.7e-06 57.4 32 87.5
Rhsim07G0035000 Rhododendron simsii HOM05D002629 ORTHO05D028548 1.7e-06 57.4 42 66.7


User provided reference genes

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