Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-51 206.1 103 100.0
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 5.4e-45 184.1 94 95.7
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.6e-44 182.6 94 94.7
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 2.1e-41 172.2 85 100.0
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 6.4e-38 160.6 94 80.9
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 8.3e-38 160.2 94 81.9
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.4e-37 159.5 94 81.9
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 5.4e-37 157.5 94 80.9
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 5.4e-37 157.5 89 86.5
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 9.2e-37 156.8 95 80.0
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 1.6e-36 156.0 92 81.5
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 1.6e-36 156.0 92 81.5
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 2.7e-36 155.2 92 81.5
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 4.6e-36 154.5 88 85.2
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 7.8e-36 153.7 90 82.2
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.0e-35 153.3 88 84.1
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.3e-35 152.9 86 86.0
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.3e-35 152.9 93 79.6
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.3e-35 152.9 92 81.5
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 1.7e-35 152.5 89 82.0
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 3.0e-35 151.8 90 80.0
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 3.9e-35 151.4 93 78.5
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 3.9e-35 151.4 88 84.1
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 5.1e-35 151.0 88 81.8
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 8.6e-35 150.2 93 77.4
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 1.5e-34 149.4 88 83.0
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.9e-34 149.1 93 77.4
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 1.9e-34 149.1 88 81.8
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.9e-34 149.1 90 78.9
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 5.6e-34 147.5 88 79.5
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 9.5e-34 146.7 96 72.9
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 9.5e-34 146.7 96 72.9
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.2e-33 146.4 92 77.2
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 1.2e-33 146.4 88 81.8
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 1.6e-33 146.0 96 72.9
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 3.6e-33 144.8 88 79.5
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 3.6e-33 144.8 91 75.8
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 4.7e-33 144.4 90 78.9
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 4.7e-33 144.4 94 71.3
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 6.2e-33 144.1 94 72.3
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 6.2e-33 144.1 87 79.3
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 8.1e-33 143.7 91 75.8
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 8.1e-33 143.7 89 76.4
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 8.1e-33 143.7 87 78.2
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 8.1e-33 143.7 86 80.2
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.1e-32 143.3 93 74.2
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 1.4e-32 142.9 88 79.5
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 1.4e-32 142.9 88 78.4
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 1.4e-32 142.9 87 78.2
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.8e-32 142.5 87 78.2
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 1.8e-32 142.5 87 77.0
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 2.3e-32 142.1 93 75.3
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 2.3e-32 142.1 93 75.3
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 2.3e-32 142.1 93 75.3
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.3e-32 142.1 88 76.1
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 2.3e-32 142.1 93 74.2
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 3.1e-32 141.7 92 71.7
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 3.1e-32 141.7 85 80.0
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 4.0e-32 141.4 83 81.9
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 6.8e-32 140.6 93 74.2
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 6.8e-32 140.6 93 74.2
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 6.8e-32 140.6 88 76.1
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 6.8e-32 140.6 91 74.7
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 8.9e-32 140.2 93 73.1
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.2e-31 139.8 88 73.9
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.2e-31 139.8 91 72.5
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 1.2e-31 139.8 87 78.2
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 1.2e-31 139.8 93 73.1
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 1.5e-31 139.4 93 73.1
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 2.0e-31 139.0 90 74.4
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.0e-31 139.0 90 74.4
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 2.0e-31 139.0 87 77.0
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 2.6e-31 138.7 93 72.0
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 5.8e-31 137.5 88 73.9
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 7.5e-31 137.1 90 73.3
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 7.5e-31 137.1 90 74.4
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 7.5e-31 137.1 87 75.9
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 9.9e-31 136.7 88 76.1
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 1.3e-30 136.3 88 77.3
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.7e-30 136.0 113 65.5
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.7e-30 136.0 84 79.8
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 2.9e-30 135.2 88 76.1
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.7e-30 134.8 89 74.2
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 6.4e-30 134.0 97 67.0
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 6.4e-30 134.0 88 72.7
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 3.2e-29 131.7 92 71.7
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 9.2e-29 130.2 77 80.5
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.6e-28 129.4 94 67.0
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 2.1e-28 129.0 88 72.7
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 6.6e-27 124.0 76 78.9
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 6.6e-27 124.0 90 65.6
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 6.6e-27 124.0 90 67.8
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 1.5e-26 122.9 72 80.6
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 3.1e-24 115.2 84 67.9
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 2.6e-23 112.1 79 69.6
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 3.4e-23 111.7 82 64.6
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.7e-22 109.4 79 67.1
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 6.4e-22 107.5 69 73.9
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 7.1e-21 104.0 90 61.1
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 1.2e-20 103.2 59 79.7
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.0e-15 85.9 67 61.2
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 1.7e-14 82.8 47 85.1
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 2.3e-11 72.4 61 65.6
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 5.8e-07 57.8 64 37.5


User provided reference genes

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