Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p027745 Quercus lobata HOM05D000005 ORTHO05D010574 1.6e-252 875.5 416 100.0
QL04p027395 Quercus lobata HOM05D000083 ORTHO05D001732 3.2e-205 718.4 416 84.4
QL04p027572 Quercus lobata HOM05D000056 ORTHO05D000019 8.5e-166 587.4 413 73.1
QL04p027067 Quercus lobata HOM05D000083 ORTHO05D001732 3.2e-157 558.9 315 84.8
QL04p027112 Quercus lobata HOM05D000005 ORTHO05D010574 6.6e-126 454.9 439 56.0
QL04p027198 Quercus lobata HOM05D000005 ORTHO05D010574 1.5e-125 453.8 366 64.5
QL04p027472 Quercus lobata HOM05D000005 ORTHO05D010574 3.6e-124 449.1 501 51.3
Haze_17731 Corylus avellana HOM05D000005 ORTHO05D010574 1.8e-86 323.9 369 50.7
Cfa018270 Carpinus fangiana HOM05D000005 ORTHO05D010574 7.6e-82 308.5 390 46.2
Haze_17813 Corylus avellana HOM05D000005 ORTHO05D010574 6.7e-78 295.4 370 47.0
Haze_17817 Corylus avellana HOM05D000005 ORTHO05D010574 5.0e-73 279.3 376 42.3
Haze_17819 Corylus avellana HOM05D000005 ORTHO05D010574 4.7e-63 246.1 363 44.4
Haze_17818 Corylus avellana HOM05D000005 ORTHO05D010574 3.5e-58 229.9 298 44.0
QL05p082212 Quercus lobata HOM05D000005 ORTHO05D010574 3.5e-58 229.9 337 40.7
Haze_17828 Corylus avellana HOM05D000005 ORTHO05D010574 1.2e-55 221.5 191 56.5
Cfa018268 Carpinus fangiana HOM05D000005 ORTHO05D010574 3.6e-55 219.9 191 57.6
Haze_17730 Corylus avellana HOM05D000005 ORTHO05D010574 3.6e-55 219.9 412 35.9
QL09p004694 Quercus lobata HOM05D000005 ORTHO05D010574 4.4e-53 213.0 393 35.4
QL04p028127 Quercus lobata HOM05D000005 ORTHO05D010574 3.8e-49 199.9 217 53.0
Cfa018271 Carpinus fangiana HOM05D000005 ORTHO05D010574 7.0e-43 179.1 292 40.4
CANSAT01G0874 Cannabis sativa HOM05D000005 ORTHO05D000012 1.2e-39 168.3 372 29.0
QL09p003267 Quercus lobata HOM05D000005 ORTHO05D010574 3.6e-39 166.8 149 53.7
Cfa011656 Carpinus fangiana HOM05D000005 ORTHO05D010574 2.0e-37 161.0 408 29.4
RcHm_v2.0_Chr4g0429711 Rosa chinensis HOM05D000005 ORTHO05D010574 2.6e-37 160.6 348 33.0
Prupe.7G065400 Prunus persica HOM05D000005 ORTHO05D000012 6.3e-36 156.0 351 29.9
MD12G1068700 Malus domestica HOM05D000005 ORTHO05D010574 2.9e-33 147.1 381 28.9
QL09p003167 Quercus lobata HOM05D000005 ORTHO05D010574 4.3e-32 143.3 309 35.3
QL09p004668 Quercus lobata HOM05D000005 ORTHO05D010574 7.3e-32 142.5 376 30.6
Cfa008053 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.6e-31 141.4 176 41.5
Cfa018269 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.4e-30 138.3 320 31.9
RcHm_v2.0_Chr1g0317981 Rosa chinensis HOM05D000005 ORTHO05D010574 5.2e-30 136.3 205 38.0
QL03p068834 Quercus lobata HOM05D000005 ORTHO05D010574 1.5e-29 134.8 293 31.7
Haze_24261 Corylus avellana HOM05D000005 ORTHO05D010574 1.3e-28 131.7 210 34.3
Cfa011658 Carpinus fangiana HOM05D000005 ORTHO05D010574 8.3e-28 129.0 194 35.1
Cfa011655 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.2e-26 125.2 217 31.8
RcHm_v2.0_Chr6g0251631 Rosa chinensis HOM05D000005 ORTHO05D012233 3.3e-24 117.1 368 27.7
QL04p027965 Quercus lobata HOM05D000005 ORTHO05D010574 1.2e-23 115.2 175 37.7
MD05G1002200 Malus domestica HOM05D000005 ORTHO05D010574 4.7e-23 113.2 318 30.2
QL03p063704 Quercus lobata HOM05D000005 ORTHO05D010574 4.0e-22 110.2 191 32.5
CANSAT78G1597 Cannabis sativa HOM05D000005 ORTHO05D010574 6.8e-22 109.4 214 30.4
QL09p003102 Quercus lobata HOM05D000005 ORTHO05D010574 2.0e-21 107.8 196 33.7
CiPaw.16G076400 Carya illinoinensis HOM05D000005 ORTHO05D010574 3.7e-20 103.6 196 35.7
QL04p027606 Quercus lobata HOM05D000005 ORTHO05D010574 1.1e-19 102.1 78 65.4
Cfa011657 Carpinus fangiana HOM05D000005 ORTHO05D010574 4.6e-18 96.7 211 28.4
CANSAT78G2183 Cannabis sativa HOM05D000005 ORTHO05D010574 1.0e-17 95.5 159 35.2
Cfa012834 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.0e-17 95.5 154 33.1
CsaV3_5G039740 Cucumis sativus L. HOM05D000005 ORTHO05D014598 1.7e-17 94.7 335 23.6
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 3.0e-17 94.0 187 31.0
MD05G1002400 Malus domestica HOM05D000005 ORTHO05D012870 5.0e-17 93.2 326 24.8
Prupe.8G005400 Prunus persica HOM05D000005 ORTHO05D000012 5.0e-17 93.2 358 26.8
MELO3C022148.2 Cucumis melo HOM05D000005 ORTHO05D014598 2.5e-16 90.9 336 24.7
MD17G1192900 Malus domestica HOM05D000005 ORTHO05D000012 4.3e-16 90.1 345 24.9
Sed0026450 Sechium edule HOM05D000005 ORTHO05D014598 5.6e-16 89.7 323 26.0
MELO3C025516.2 Cucumis melo HOM05D000005 ORTHO05D014598 2.8e-15 87.4 324 24.1
Sed0009572 Sechium edule HOM05D000005 ORTHO05D014598 2.8e-15 87.4 326 23.6
ClCG08G001380 Citrullus lanatus HOM05D000005 ORTHO05D014598 6.2e-15 86.3 334 26.3
RcHm_v2.0_Chr1g0342551 Rosa chinensis HOM05D000005 ORTHO05D010574 6.2e-15 86.3 184 31.5
QL03p063806 Quercus lobata HOM05D000005 ORTHO05D000012 2.3e-14 84.3 176 29.0
RcHm_v2.0_Chr7g0223661 Rosa chinensis HOM05D000005 ORTHO05D000012 6.8e-14 82.8 156 32.1
ClCG08G001360 Citrullus lanatus HOM05D000005 ORTHO05D010574 5.8e-13 79.7 157 26.8
FAN15G3532 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-12 78.6 163 28.8
FvH4_2g02050 Fragaria vesca HOM05D000005 ORTHO05D000012 1.1e-11 75.5 162 26.5
RcHm_v2.0_Chr2g0106541 Rosa chinensis HOM05D000005 ORTHO05D012233 1.1e-11 75.5 212 25.9
FvH4_1g16620 Fragaria vesca HOM05D000005 ORTHO05D012233 1.4e-11 75.1 213 27.2
RcHm_v2.0_Chr4g0429701 Rosa chinensis HOM05D000005 ORTHO05D000012 3.2e-11 73.9 184 25.0
FAN19G0622 Fragaria x ananassa HOM05D000005 ORTHO05D012233 4.1e-11 73.6 213 27.2
FAN23G1303 Fragaria x ananassa HOM05D000005 ORTHO05D012233 4.1e-11 73.6 206 29.1
RcHm_v2.0_Chr2g0106511 Rosa chinensis HOM05D000005 ORTHO05D012233 7.1e-11 72.8 189 26.5
Prupe.8G005200 Prunus persica HOM05D000005 ORTHO05D000012 1.2e-10 72.0 154 32.5
ClCG08G001330 Citrullus lanatus HOM05D000005 ORTHO05D010574 1.6e-10 71.6 158 25.9
CiPaw.16G015500 Carya illinoinensis HOM05D000005 ORTHO05D010574 3.5e-10 70.5 169 30.8
FAN23G0394 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.5e-10 70.5 194 27.8
GSVIVG01015681001 Vitis vinifera HOM05D000005 ORTHO05D001748 3.5e-10 70.5 199 26.6
FAN28G1466 Fragaria x ananassa HOM05D000005 ORTHO05D012233 4.6e-10 70.1 189 27.5
CsaV3_5G039730 Cucumis sativus L. HOM05D000005 ORTHO05D014598 7.8e-10 69.3 335 23.9
RcHm_v2.0_Chr2g0124621 Rosa chinensis HOM05D000005 ORTHO05D012233 7.8e-10 69.3 187 25.7
MD10G1006800 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-09 67.8 158 29.7
FAN06G4743 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.0e-09 67.4 151 29.1
FAN19G0289 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.0e-09 67.4 194 27.3
FAN26G1463 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.0e-09 67.4 238 26.9
FAN28G2233 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.0e-09 67.4 195 27.7
MD10G1006400 Malus domestica HOM05D000005 ORTHO05D000012 3.0e-09 67.4 167 26.9
FAN26G2122 Fragaria x ananassa HOM05D000005 ORTHO05D012233 5.1e-09 66.6 194 27.8
MD10G1007300 Malus domestica HOM05D000005 ORTHO05D000012 1.9e-08 64.7 178 27.0
GSVIVG01025878001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.5e-08 64.3 154 26.0
FAN04G2194 Fragaria x ananassa HOM05D000005 ORTHO05D012870 5.6e-08 63.2 151 26.5
QL04p027735 Quercus lobata HOM05D000005 ORTHO05D000012 5.6e-08 63.2 164 26.2
Sed0011506 Sechium edule HOM05D000005 ORTHO05D019022 1.2e-07 62.0 147 24.5
GSVIVG01004873001 Vitis vinifera HOM05D000005 ORTHO05D000012 1.2e-07 62.0 156 26.3
QL04p026662 Quercus lobata HOM05D000005 ORTHO05D000012 1.6e-07 61.6 164 25.6
QL04p027378 Quercus lobata HOM05D000005 ORTHO05D000012 1.6e-07 61.6 164 25.6
RcHm_v2.0_Chr7g0240641 Rosa chinensis HOM05D000005 ORTHO05D012870 4.7e-07 60.1 141 28.4
ClCG08G001350 Citrullus lanatus HOM05D000005 ORTHO05D014598 1.1e-06 58.9 154 27.9
QL04p027246 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-06 58.9 204 22.5
Sed0004955 Sechium edule HOM05D000005 ORTHO05D019022 1.8e-06 58.2 154 23.4
QL09p004704 Quercus lobata HOM05D000005 ORTHO05D000012 3.1e-06 57.4 200 26.0
FAN18G3744 Fragaria x ananassa HOM05D000005 ORTHO05D012870 4.0e-06 57.0 135 24.4
Potri.017G105201 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.2e-06 56.6 154 25.3
RcHm_v2.0_Chr1g0328941 Rosa chinensis HOM05D000005 ORTHO05D001748 6.8e-06 56.2 163 24.5
FvH4_5g38500 Fragaria vesca HOM05D000005 ORTHO05D012870 8.9e-06 55.8 166 26.5


User provided reference genes

Program Settings