Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p026700 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-117 424.1 199 100.0
QL04p026904 Quercus lobata HOM05D000007 ORTHO05D000039 7.2e-70 267.7 231 61.5
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-67 259.2 154 82.5
QL04p026176 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-27 125.6 262 34.7
QL04p026212 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-25 119.4 261 33.7
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 4.3e-22 109.0 224 35.7
QL08p042875 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-20 102.4 223 34.1
QL03p073760 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-16 89.4 218 33.9
QL02p081705 Quercus lobata HOM05D000007 ORTHO05D000039 3.3e-14 82.8 218 32.1
Cfa007562 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-13 80.5 218 32.1
QL02p081830 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-13 79.0 236 30.5
QL02p082003 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-13 78.2 236 30.5
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-12 77.8 228 32.9
QL08p042804 Quercus lobata HOM05D000007 ORTHO05D026088 5.8e-11 72.0 128 39.8
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 1.7e-10 70.5 213 29.6
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-10 70.5 192 31.8
Cfa007564 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.2e-10 70.1 220 28.6
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.7e-10 69.3 147 34.7
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 1.4e-09 67.4 148 36.5
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.2e-09 66.2 221 27.6
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.4e-09 65.5 222 29.7
CiPaw.03G025900 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.4e-09 65.5 215 28.4
PSO017G1327 Papaver somniferum HOM05D000007 ORTHO05D000039 7.0e-09 65.1 159 29.6
Haze_14522 Corylus avellana HOM05D000007 ORTHO05D000039 2.0e-08 63.5 229 31.0
PSO832G1932 Papaver somniferum HOM05D000007 ORTHO05D000017 2.7e-08 63.2 219 25.1
Medtr7g016930 Medicago truncatula HOM05D000007 ORTHO05D000039 3.5e-08 62.8 202 32.7
RcHm_v2.0_Chr3g0455781 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-08 62.0 232 24.6
FvH4_2g08290 Fragaria vesca HOM05D000007 ORTHO05D000017 7.8e-08 61.6 164 28.7
FAN24G0304 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.8e-08 61.6 164 28.7
QL02p081858 Quercus lobata HOM05D000007 ORTHO05D000039 7.8e-08 61.6 153 35.9
PSO017G4400 Papaver somniferum HOM05D000007 ORTHO05D000017 1.0e-07 61.2 148 33.1
Psat3g103960 Pisum sativum HOM05D000007 ORTHO05D000039 1.0e-07 61.2 206 31.1
Sc05g0008370 Simmondsia chinensis HOM05D000007 ORTHO05D000017 1.0e-07 61.2 185 27.0
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.3e-07 60.8 226 27.0
Medtr1g007450 Medicago truncatula HOM05D000007 ORTHO05D000039 1.3e-07 60.8 157 36.9
PSO447G0256 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-07 60.8 211 28.4
Psat7g129440 Pisum sativum HOM05D000007 ORTHO05D000039 1.3e-07 60.8 246 28.5
Psat7g129480 Pisum sativum HOM05D000007 ORTHO05D000039 1.3e-07 60.8 246 28.5
arahy.Tifrunner.gnm1.ann1.F3ZHRM Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-07 60.5 166 28.9
Hma1.2p1_0036F.1_g023680 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.7e-07 60.5 163 27.6
Medtr5g096630 Medicago truncatula HOM05D000007 ORTHO05D000039 1.7e-07 60.5 246 27.6
PSO384G1847 Papaver somniferum HOM05D000007 ORTHO05D000017 1.7e-07 60.5 176 30.1
PSO170G3674 Papaver somniferum HOM05D000007 ORTHO05D000017 2.3e-07 60.1 146 30.8
Psat6g036320 Pisum sativum HOM05D000007 ORTHO05D000039 2.3e-07 60.1 153 34.0
TWI31G1434 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.3e-07 60.1 206 28.6
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 3.0e-07 59.7 126 31.0
RcHm_v2.0_Chr3g0461521 Rosa chinensis HOM05D003032 ORTHO05D003456 3.0e-07 59.7 176 32.4
Aqoxy4G00448 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.9e-07 59.3 198 28.3
Cfa007606 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.9e-07 59.3 155 29.0
Medtr0129s0070 Medicago truncatula HOM05D000007 ORTHO05D000039 3.9e-07 59.3 225 27.1
Potri.017G012200 Populus trichocarpa HOM05D000007 ORTHO05D000039 3.9e-07 59.3 215 30.2
arahy.Tifrunner.gnm1.ann1.DDZ1HR Arachis hypogaea HOM05D000007 ORTHO05D000017 5.0e-07 58.9 166 28.3
Peaxi162Scf00001g04121 Petunia axillaris HOM05D000007 ORTHO05D013549 5.0e-07 58.9 174 27.6
Cfa007607 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.6e-07 58.5 231 24.7
Hma1.2p1_0036F.1_g023670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 6.6e-07 58.5 225 24.9
Oeu009398.1 Olea europaea HOM05D000007 ORTHO05D000017 6.6e-07 58.5 169 29.6
ECA233G1932 Erigeron canadensis HOM05D000007 ORTHO05D000039 8.6e-07 58.2 168 28.6
PSO782G4409 Papaver somniferum HOM05D000007 ORTHO05D000017 8.6e-07 58.2 133 30.8
TWI53G1885 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.6e-07 58.2 160 30.6
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-06 57.8 119 31.1
EL10Ac8g20101 Beta vulgaris HOM05D000007 ORTHO05D000039 1.5e-06 57.4 154 29.2
PSO541G1145 Papaver somniferum HOM05D000007 ORTHO05D000017 1.5e-06 57.4 148 35.1
Peaxi162Scf00001g04112 Petunia axillaris HOM05D000007 ORTHO05D013549 1.5e-06 57.4 161 29.8
Cc03_g06540 Coffea canephora HOM05D000007 ORTHO05D000017 1.9e-06 57.0 156 30.1
COL.COLO4_09399 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.9e-06 57.0 129 32.6
Eucgr.F02950 Eucalyptus grandis HOM05D000007 ORTHO05D000039 1.9e-06 57.0 214 27.1
FAN06G1206 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.9e-06 57.0 153 30.7
Medtr4g031770 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 57.0 177 28.8
Medtr7g017040 Medicago truncatula HOM05D000007 ORTHO05D000039 1.9e-06 57.0 203 29.6
QL07p009589 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-06 57.0 188 27.7
RcHm_v2.0_Chr3g0482231 Rosa chinensis HOM05D000007 ORTHO05D000039 1.9e-06 57.0 122 35.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.9e-06 57.0 179 30.2
TPR.G16362 Trifolium pratense HOM05D000007 ORTHO05D000039 1.9e-06 57.0 159 32.7
EL10Ac8g20099 Beta vulgaris HOM05D000007 ORTHO05D000039 2.5e-06 56.6 155 30.3
Potri.011G121200 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.5e-06 56.6 232 24.6
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 2.5e-06 56.6 205 26.8
FAN08G2946 Fragaria x ananassa HOM05D000007 ORTHO05D019190 3.3e-06 56.2 164 27.4
HanXRQChr10g0314851 Helianthus annuus HOM05D000007 ORTHO05D000039 3.3e-06 56.2 140 29.3
Lsat_1_v5_gn_3_24620 Lactuca sativa HOM05D000007 ORTHO05D000017 3.3e-06 56.2 217 25.3
Manes.09G122100 Manihot esculenta HOM05D000007 ORTHO05D000039 3.3e-06 56.2 217 25.3
Medtr5g097350 Medicago truncatula HOM05D000007 ORTHO05D000039 3.3e-06 56.2 137 32.1
Psat3g208120 Pisum sativum HOM05D000007 ORTHO05D000039 3.3e-06 56.2 152 32.9
Rhsim07G0186000 Rhododendron simsii HOM05D001942 ORTHO05D001996 3.3e-06 56.2 113 34.5
ECA246G4363 Erigeron canadensis HOM05D000007 ORTHO05D000017 4.3e-06 55.8 211 26.5
PSO339G0434 Papaver somniferum HOM05D000007 ORTHO05D000017 4.3e-06 55.8 208 26.0
PSO339G2125 Papaver somniferum HOM05D000007 ORTHO05D000017 4.3e-06 55.8 208 26.0
PSO339G4245 Papaver somniferum HOM05D000007 ORTHO05D000017 4.3e-06 55.8 208 26.0
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.3e-06 55.8 181 29.3
AUR62039096 Chenopodium quinoa HOM05D000007 ORTHO05D000017 5.6e-06 55.5 202 27.2
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.6e-06 55.5 159 30.8
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 5.6e-06 55.5 215 28.4
Peaxi162Scf01475g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 5.6e-06 55.5 179 26.8
Ca_22782_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 7.3e-06 55.1 239 28.5
FAN10G3302 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.3e-06 55.1 153 30.1
Gohir.A08G015200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.3e-06 55.1 199 25.6
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.3e-06 55.1 159 30.8
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 9.5e-06 54.7 199 29.6
Cfa000427 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.5e-06 54.7 192 26.6
FAN06G2092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.5e-06 54.7 153 30.1
FAN10G1832 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.5e-06 54.7 153 30.1
QL03p023730 Quercus lobata HOM05D000007 ORTHO05D000039 9.5e-06 54.7 159 27.0


User provided reference genes

Program Settings