Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p026374 Quercus lobata HOM05D000259 ORTHO05D000155 4.1e-44 181.0 93 100.0
QL10p015646 Quercus lobata HOM05D000259 ORTHO05D000155 1.9e-20 102.4 62 83.9
FvH4_5g15460 Fragaria vesca HOM05D000259 ORTHO05D000155 1.2e-16 89.7 62 71.0
FAN13G0256 Fragaria x ananassa HOM05D000259 ORTHO05D000155 1.2e-16 89.7 62 71.0
FAN18G3670 Fragaria x ananassa HOM05D000259 ORTHO05D000155 1.2e-16 89.7 62 71.0
FAN04G1048 Fragaria x ananassa HOM05D000259 ORTHO05D000155 2.8e-16 88.6 62 69.4
Prupe.5G186600 Prunus persica HOM05D000259 ORTHO05D000155 8.1e-16 87.0 62 66.1
Lsat_1_v5_gn_4_107401 Lactuca sativa HOM05D000259 ORTHO05D000155 2.4e-15 85.5 62 64.5
Cpa.g.sc17.210 Carica papaya HOM05D000259 ORTHO05D000155 3.1e-15 85.1 62 66.1
RcHm_v2.0_Chr7g0180621 Rosa chinensis HOM05D000259 ORTHO05D000155 3.1e-15 85.1 62 66.1
Glyma.05G029600 Glycine max HOM05D000259 ORTHO05D000155 4.0e-15 84.7 62 64.5
Potri.006G098700 Populus trichocarpa HOM05D000259 ORTHO05D000155 4.0e-15 84.7 62 66.1
TWI60G0294 Tripterygium wilfordii HOM05D000259 ORTHO05D000155 4.0e-15 84.7 62 62.9
Sabra06G0075800 Salix brachista HOM05D000259 ORTHO05D000155 5.2e-15 84.3 62 66.1
MD06G1188400 Malus domestica HOM05D000259 ORTHO05D000155 1.2e-14 83.2 62 64.5
arahy.Tifrunner.gnm1.ann1.IW49PZ Arachis hypogaea HOM05D000259 ORTHO05D000155 2.0e-14 82.4 60 63.3
arahy.Tifrunner.gnm1.ann1.Y0BV4U Arachis hypogaea HOM05D000259 ORTHO05D000155 2.0e-14 82.4 60 63.3
CANSAT80G0423 Cannabis sativa HOM05D000259 ORTHO05D000155 2.0e-14 82.4 62 62.9
Phvul.003G192500 Phaseolus vulgaris HOM05D000259 ORTHO05D000155 2.0e-14 82.4 62 62.9
Haze_07376 Corylus avellana HOM05D000259 ORTHO05D000155 2.6e-14 82.0 62 59.7
HanXRQChr16g0503211 Helianthus annuus HOM05D000259 ORTHO05D000155 2.6e-14 82.0 62 61.3
Nitab4.5_0004605g0010 Nicotiana tabacum HOM05D000259 ORTHO05D000155 2.6e-14 82.0 61 65.6
Peaxi162Scf00009g00318 Petunia axillaris HOM05D000259 ORTHO05D000155 2.6e-14 82.0 62 64.5
ECA232G2750 Erigeron canadensis HOM05D000259 ORTHO05D000155 3.4e-14 81.6 62 61.3
Lj9P460T29 Lonicera japonica HOM05D000259 ORTHO05D000155 3.4e-14 81.6 63 60.3
VMungo1215G2490 Vigna mungo HOM05D000259 ORTHO05D000155 3.4e-14 81.6 62 61.3
Duzib205G0603 Durio zibethinus HOM05D000259 ORTHO05D000155 4.4e-14 81.3 62 62.9
Gohir.A07G064700 Gossypium hirsutum HOM05D000259 ORTHO05D000155 4.4e-14 81.3 62 62.9
Solyc03g113190.1 Solanum lycopersicum HOM05D000259 ORTHO05D000155 4.4e-14 81.3 60 65.0
Sopen03g032250 Solanum pennellii HOM05D000259 ORTHO05D000155 4.4e-14 81.3 60 65.0
THA.LOC104812557 Tarenaya hassleriana HOM05D000259 ORTHO05D000155 4.4e-14 81.3 62 62.9
MELO3C002206.2 Cucumis melo HOM05D000259 ORTHO05D000155 5.8e-14 80.9 62 61.3
Gohir.D07G069600 Gossypium hirsutum HOM05D000259 ORTHO05D000155 5.8e-14 80.9 65 60.0
Gorai.001G073200 Gossypium raimondii HOM05D000259 ORTHO05D000155 5.8e-14 80.9 65 60.0
SalBow5G0554 Salvia bowleyana HOM05D000259 ORTHO05D000155 5.8e-14 80.9 62 59.7
SGA_v2.0_scaffold56G20051 Striga asiatica HOM05D000259 ORTHO05D000155 5.8e-14 80.9 62 59.7
Aa31LG4G4950 Aethionema arabicum HOM05D000259 ORTHO05D000155 9.9e-14 80.1 62 61.3
Potri.016G113800 Populus trichocarpa HOM05D000259 ORTHO05D000155 9.9e-14 80.1 62 62.9
Sed0001569 Sechium edule HOM05D000259 ORTHO05D000155 9.9e-14 80.1 62 61.3
PGSC0003DMG400025348 Solanum tuberosum HOM05D000259 ORTHO05D000155 9.9e-14 80.1 60 65.0
TWI81G0737 Tripterygium wilfordii HOM05D000259 ORTHO05D000155 9.9e-14 80.1 62 58.1
Atru.chr9.2313 Acer truncatum HOM05D000259 ORTHO05D000155 1.3e-13 79.7 62 61.3
ClCG01G014410 Citrullus lanatus HOM05D000259 ORTHO05D000155 1.3e-13 79.7 62 62.9
CsaV3_1G007910 Cucumis sativus L. HOM05D000259 ORTHO05D000155 1.3e-13 79.7 62 61.3
Lalb_Chr12g0196701 Lupinus albus HOM05D000259 ORTHO05D000155 1.7e-13 79.3 60 63.3
Nitab4.5_0000785g0200 Nicotiana tabacum HOM05D000259 ORTHO05D000155 1.7e-13 79.3 61 62.3
Thecc.03G079500 Theobroma cacao HOM05D000259 ORTHO05D000155 2.2e-13 79.0 62 61.3
CAN.G1711.6 Capsicum annuum HOM05D000259 ORTHO05D000155 2.9e-13 78.6 60 65.0
Ciclev10018651m.g Citrus clementina HOM05D000259 ORTHO05D000155 2.9e-13 78.6 64 60.9
Duzib084G0040 Durio zibethinus HOM05D000259 ORTHO05D000155 2.9e-13 78.6 62 59.7
PGR083G2509 Punica granatum HOM05D000259 ORTHO05D000155 2.9e-13 78.6 60 61.7
TPR.G38398 Trifolium pratense HOM05D000259 ORTHO05D000155 3.8e-13 78.2 60 58.3
BcaB02g06964 Brassica carinata HOM05D000259 ORTHO05D000155 4.9e-13 77.8 62 58.1
Migut.I00128 Erythranthe guttata HOM05D000259 ORTHO05D000155 4.9e-13 77.8 61 59.0
Manes.14G075000 Manihot esculenta HOM05D000259 ORTHO05D000155 6.4e-13 77.4 61 55.7
Medtr4g107850 Medicago truncatula HOM05D000259 ORTHO05D000155 6.4e-13 77.4 60 58.3
Psat4g053600 Pisum sativum HOM05D000259 ORTHO05D000155 6.4e-13 77.4 60 58.3
Sc04g0002450 Simmondsia chinensis HOM05D000259 ORTHO05D000155 6.4e-13 77.4 62 59.7
Cfa018987 Carpinus fangiana HOM05D000259 ORTHO05D000155 8.4e-13 77.0 62 58.1
Sp5g29840 Schrenkiella parvula HOM05D000259 ORTHO05D000155 8.4e-13 77.0 62 58.1
A07p29250 Brassica napus HOM05D000259 ORTHO05D000155 1.1e-12 76.6 62 56.5
C06p33150 Brassica napus HOM05D000259 ORTHO05D000155 1.1e-12 76.6 62 56.5
BolC6t38430H Brassica oleracea HOM05D000259 ORTHO05D000155 1.1e-12 76.6 62 56.5
BraA07t30564Z Brassica rapa HOM05D000259 ORTHO05D000155 1.1e-12 76.6 62 56.5
Actinidia34977 Actinidia chinensis HOM05D000259 ORTHO05D000155 1.4e-12 76.3 61 59.0
CSS0010450 Camellia sinensis var. sinensis HOM05D000259 ORTHO05D000155 1.4e-12 76.3 65 52.3
Ca_21846_v3 Cicer arietinum L. HOM05D000259 ORTHO05D000155 1.4e-12 76.3 60 56.7
Duzib068G0138 Durio zibethinus HOM05D000259 ORTHO05D000155 1.4e-12 76.3 63 61.9
Eucgr.B00432 Eucalyptus grandis HOM05D000259 ORTHO05D000155 1.9e-12 75.9 62 59.7
Thhalv10018050m.g Eutrema salsugineum HOM05D000259 ORTHO05D000155 1.9e-12 75.9 62 56.5
Rhsim12G0159400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.4e-12 75.5 61 57.4
AUR62021736 Chenopodium quinoa HOM05D000259 ORTHO05D000155 3.2e-12 75.1 60 55.0
Lj4g0009198 Lotus japonicus HOM05D000259 ORTHO05D000155 3.2e-12 75.1 60 58.3
Oeu048739.3 Olea europaea HOM05D000259 ORTHO05D000155 3.2e-12 75.1 60 55.0
AL2G34610 Arabidopsis lyrata HOM05D000259 ORTHO05D000155 4.2e-12 74.7 62 56.5
AT1G74720 Arabidopsis thaliana HOM05D000259 ORTHO05D000155 4.2e-12 74.7 62 56.5
Sabra16G0109200 Salix brachista HOM05D000259 ORTHO05D000155 5.4e-12 74.3 62 58.1
Carub.0002s2151 Capsella rubella HOM05D000259 ORTHO05D000155 7.1e-12 73.9 62 54.8
Aqoxy3G00753 Aquilegia oxysepala HOM05D000259 ORTHO05D000155 9.3e-12 73.6 62 58.1
Actinidia19060 Actinidia chinensis HOM05D000259 ORTHO05D000155 1.2e-11 73.2 61 57.4
AUR62008361 Chenopodium quinoa HOM05D000259 ORTHO05D000155 1.2e-11 73.2 57 56.1
DCAR_021536 Daucus carota HOM05D000259 ORTHO05D000155 1.2e-11 73.2 62 53.2
CARHR068020 Cardamine hirsuta HOM05D000259 ORTHO05D000155 1.6e-11 72.8 62 56.5
GSVIVG01008058001 Vitis vinifera HOM05D000259 ORTHO05D000155 1.6e-11 72.8 62 58.1
Cc04_g15500 Coffea canephora HOM05D000259 ORTHO05D000155 3.5e-11 71.6 62 50.0
Manes.06G095700 Manihot esculenta HOM05D000259 ORTHO05D000155 3.5e-11 71.6 60 53.3
CiPaw.11G038500 Carya illinoinensis HOM05D000259 ORTHO05D000155 4.6e-11 71.2 63 58.7
Nn5g27373 Nelumbo nucifera HOM05D000259 ORTHO05D000155 4.6e-11 71.2 61 54.1
TAR622G0618 Trochodendron aralioides HOM05D000259 ORTHO05D000155 4.6e-11 71.2 62 54.8
Ah.11g048750 Amaranthus hybridus HOM05D000259 ORTHO05D000155 6.0e-11 70.9 61 54.1
unitig_52.g17494 Utricularia gibba HOM05D000259 ORTHO05D000155 1.7e-10 69.3 63 55.6
Dinv19918 Davidia involucrata HOM05D000259 ORTHO05D000155 8.7e-10 67.0 62 58.1
TAR374G1181 Trochodendron aralioides HOM05D000259 ORTHO05D000155 1.9e-09 65.9 62 54.8
MBI04_g37715_MAGBIO Magnolia biondii HOM05D000259 ORTHO05D000155 2.5e-09 65.5 61 52.5
EL10Ac5g10946 Beta vulgaris HOM05D000259 ORTHO05D000155 1.6e-08 62.8 60 48.3
CDE04G2795 Ceratophyllum demersum HOM05D000259 ORTHO05D000155 2.1e-08 62.4 61 49.2
Zm00001eb357370 Zea mays HOM05D000259 ORTHO05D000155 6.2e-08 60.8 62 46.8
ATR1120G047 Amborella trichopoda HOM05D000259 ORTHO05D000155 1.4e-07 59.7 61 47.5
THA.LOC104820783 Tarenaya hassleriana HOM05D000259 ORTHO05D000155 2.4e-07 58.9 51 54.9
Os01g0587300 Oryza sativa ssp. japonica HOM05D000259 ORTHO05D000155 1.5e-06 56.2 56 50.0
MD14G1004500 Malus domestica HOM05D000259 ORTHO05D000155 2.6e-06 55.5 59 47.5
Ciclev10023869m.g Citrus clementina HOM05D000259 ORTHO05D000155 4.4e-06 54.7 52 51.9
Actinidia20922 Actinidia chinensis HOM05D000259 ORTHO05D000155 5.8e-06 54.3 52 51.9
ECA236G1738 Erigeron canadensis HOM05D000259 ORTHO05D000155 5.8e-06 54.3 51 47.1
AT5G17980 Arabidopsis thaliana HOM05D000259 ORTHO05D000155 7.6e-06 53.9 70 41.4
Oeu058617.1 Olea europaea HOM05D000259 ORTHO05D000155 9.9e-06 53.5 63 41.3


User provided reference genes

Program Settings