Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p026066 Quercus lobata HOM05D000007 ORTHO05D026088 3.0e-41 171.4 85 100.0
QL04p026748 Quercus lobata HOM05D000007 ORTHO05D026088 7.6e-37 156.8 81 93.8
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 4.9e-28 127.5 82 79.3
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-18 94.7 84 57.1
QL08p042875 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-18 94.7 82 62.2
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-16 88.6 81 53.1
QL08p042804 Quercus lobata HOM05D000007 ORTHO05D026088 4.8e-15 84.3 76 59.2
QL04p026212 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-15 84.0 82 53.7
QL04p026176 Quercus lobata HOM05D000007 ORTHO05D000039 8.2e-15 83.6 82 56.1
QL04p022130 Quercus lobata HOM05D000007 ORTHO05D026088 1.2e-13 79.7 68 60.3
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.1e-11 73.2 87 47.1
QL02p081705 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-11 72.0 82 46.3
QL03p059296 Quercus lobata HOM05D000007 ORTHO05D026088 2.5e-11 72.0 82 52.4
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 5.5e-11 70.9 80 48.8
Lj8C10T4 Lonicera japonica HOM05D000007 ORTHO05D000039 7.2e-11 70.5 80 48.8
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.4e-11 70.1 82 45.1
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 9.4e-11 70.1 82 45.1
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.6e-10 69.3 84 45.2
Lj8C355T6 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-10 68.9 80 46.2
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.6e-10 67.8 82 42.7
Thecc.04G089700 Theobroma cacao HOM05D000007 ORTHO05D000039 7.9e-10 67.0 81 43.2
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 1.0e-09 66.6 81 44.4
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.0e-09 66.6 82 42.7
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.0e-09 66.6 82 42.7
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.0e-09 66.6 82 42.7
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.0e-09 66.6 82 42.7
MD17G1251300 Malus domestica HOM05D000007 ORTHO05D000039 1.0e-09 66.6 80 42.5
QL03p073760 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-09 66.2 84 51.2
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 1.8e-09 65.9 82 42.7
CiPaw.07G024100 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.0e-09 65.1 82 41.5
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.1e-09 64.3 82 41.5
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.1e-09 64.3 82 41.5
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 6.7e-09 63.9 82 46.3
MD17G1251900 Malus domestica HOM05D000007 ORTHO05D000039 6.7e-09 63.9 81 42.0
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.8e-09 63.5 83 42.2
CiPaw.07G024300 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.1e-08 63.2 82 40.2
Lj8P355T18 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-08 63.2 65 47.7
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-08 62.4 80 41.2
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-08 62.4 80 41.2
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-08 62.4 80 41.2
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.5e-08 62.0 82 43.9
Hma1.2p1_3211F.1_g333990 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.5e-08 62.0 82 40.2
MD17G1254200 Malus domestica HOM05D000007 ORTHO05D000039 2.5e-08 62.0 77 44.2
CiPaw.07G024200 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.3e-08 61.6 82 40.2
Lj4P129T109 Lonicera japonica HOM05D000007 ORTHO05D000039 3.3e-08 61.6 80 41.2
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.3e-08 61.2 82 42.7
Lj4A129G111 Lonicera japonica HOM05D000007 ORTHO05D000039 7.4e-08 60.5 80 40.0
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-08 60.1 78 41.0
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-08 60.1 78 41.0
CiPaw.07G024400 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.3e-07 59.7 82 39.0
CiPaw.07G024500 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.3e-07 59.7 82 40.2
MD17G1252200 Malus domestica HOM05D000007 ORTHO05D000039 1.3e-07 59.7 74 43.2
PGSC0003DMG400006163 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.3e-07 59.7 83 39.8
Cpa.g.sc16.53 Carica papaya HOM05D000007 ORTHO05D000017 1.7e-07 59.3 82 42.7
MD17G1252000 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-07 59.3 76 39.5
MD17G1252800 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-07 59.3 76 39.5
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-07 59.3 82 37.8
Sed0020962 Sechium edule HOM05D000007 ORTHO05D000039 2.2e-07 58.9 75 41.3
MD17G1252700 Malus domestica HOM05D000007 ORTHO05D000039 2.8e-07 58.5 76 39.5
MD17G1253800 Malus domestica HOM05D000007 ORTHO05D000039 2.8e-07 58.5 76 42.1
TWI79G0220 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.7e-07 58.2 85 38.8
TWI79G1037 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.7e-07 58.2 85 38.8
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.8e-07 57.8 83 37.3
FvH4_6g06831 Fragaria vesca HOM05D000007 ORTHO05D000039 4.8e-07 57.8 80 42.5
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.8e-07 57.8 83 38.6
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.8e-07 57.8 83 38.6
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.8e-07 57.8 83 38.6
TWI73G0529 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.8e-07 57.8 58 44.8
MD17G1251100 Malus domestica HOM05D000007 ORTHO05D000039 8.2e-07 57.0 75 38.7
MD17G1255300 Malus domestica HOM05D000007 ORTHO05D000039 8.2e-07 57.0 74 37.8
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.1e-06 56.6 78 42.3
ClCG10G015170 Citrullus lanatus HOM05D000007 ORTHO05D000039 1.1e-06 56.6 74 41.9
Dinv01035 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-06 56.6 82 45.1
Prupe.6G319300 Prunus persica HOM05D000007 ORTHO05D000039 1.1e-06 56.6 78 41.0
Solyc07g047640.2 Solanum lycopersicum HOM05D000007 ORTHO05D000521 1.1e-06 56.6 81 38.3
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-06 56.2 82 36.6
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.8e-06 55.8 78 42.3
vmacro10317 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.8e-06 55.8 80 40.0
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.4e-06 55.5 80 40.0
MD17G1252300 Malus domestica HOM05D000007 ORTHO05D000039 2.4e-06 55.5 75 38.7
MD17G1255800 Malus domestica HOM05D000007 ORTHO05D000039 3.1e-06 55.1 76 36.8
TWI79G0415 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.1e-06 55.1 83 38.6
MD17G1256100 Malus domestica HOM05D000007 ORTHO05D000039 4.1e-06 54.7 76 38.2
RcHm_v2.0_Chr2g0111681 Rosa chinensis HOM05D000007 ORTHO05D000039 4.1e-06 54.7 82 36.6
FvH4_6g06670 Fragaria vesca HOM05D000007 ORTHO05D000039 6.9e-06 53.9 78 37.2
Nitab4.5_0000910g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.9e-06 53.9 80 36.2
RcHm_v2.0_Chr3g0456091 Rosa chinensis HOM05D000007 ORTHO05D000039 6.9e-06 53.9 74 44.6
Dinv06538 Davidia involucrata HOM05D000007 ORTHO05D000039 9.1e-06 53.5 70 40.0
Oeu017867.1 Olea europaea HOM05D000007 ORTHO05D000521 9.1e-06 53.5 94 38.3
TWI63G0287 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.1e-06 53.5 65 43.1
vmacro03638 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.1e-06 53.5 88 39.8


User provided reference genes

Program Settings