Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.5e-71 272.7 138 100.0
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 3.9e-22 108.6 85 68.2
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 6.8e-19 97.8 85 62.4
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 6.8e-19 97.8 85 64.7
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 1.5e-18 96.7 84 64.3
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 2.2e-17 92.8 78 64.1
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 8.3e-17 90.9 86 61.6
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 1.1e-16 90.5 86 59.3
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.1e-16 90.5 86 59.3
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.1e-16 90.5 86 59.3
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 4.1e-16 88.6 86 58.1
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.2e-15 87.0 86 60.5
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.0e-15 86.3 79 60.8
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 2.7e-15 85.9 86 57.0
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 4.6e-15 85.1 85 54.1
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 7.8e-15 84.3 90 54.4
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 7.8e-15 84.3 82 61.0
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 1.7e-14 83.2 89 52.8
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.3e-14 82.8 72 62.5
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.3e-14 82.8 79 57.0
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 3.9e-14 82.0 82 59.8
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 5.0e-14 81.6 89 52.8
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 6.6e-14 81.3 89 51.7
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 8.6e-14 80.9 78 53.8
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 8.6e-14 80.9 74 59.5
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 2.5e-13 79.3 72 59.7
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 4.3e-13 78.6 79 55.7
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 7.3e-13 77.8 78 53.8
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 9.5e-13 77.4 77 51.9
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 9.5e-13 77.4 94 51.1
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.2e-12 77.0 85 51.8
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 2.8e-12 75.9 82 50.0
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 4.7e-12 75.1 85 56.5
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 4.7e-12 75.1 72 55.6
Sed0016926 Sechium edule HOM05D007785 ORTHO05D008997 4.7e-12 75.1 96 50.0
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 6.2e-12 74.7 72 55.6
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 6.2e-12 74.7 85 50.6
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.1e-11 73.9 79 54.4
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 2.3e-11 72.8 85 48.2
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 4.0e-11 72.0 72 54.2
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 6.8e-11 71.2 87 49.4
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 7.5e-10 67.8 79 49.4
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 9.8e-10 67.4 80 45.0
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.3e-09 67.0 77 49.4
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.3e-09 67.0 78 47.4
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.9e-09 65.9 75 49.3
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.9e-09 65.9 75 49.3
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 4.9e-09 65.1 77 49.4
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 4.9e-09 65.1 75 46.7
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 6.4e-09 64.7 77 49.4
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 1.1e-08 63.9 108 39.8
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 4.1e-08 62.0 79 46.8
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 4.1e-08 62.0 77 48.1
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 5.4e-08 61.6 78 44.9
Prupe.2G110100 Prunus persica HOM05D007785 ORTHO05D008997 5.4e-08 61.6 73 50.7
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 7.1e-08 61.2 101 38.6
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 7.1e-08 61.2 77 42.9
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 1.6e-07 60.1 83 47.0
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 2.7e-07 59.3 79 45.6
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 2.7e-07 59.3 84 46.4
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 3.5e-07 58.9 77 45.5
Phvul.002G005800 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 4.6e-07 58.5 71 45.1
Gohir.D03G170000 Gossypium hirsutum HOM05D012518 ORTHO05D008997 6.0e-07 58.2 79 45.6
Gorai.003G180300 Gossypium raimondii HOM05D012518 ORTHO05D008997 6.0e-07 58.2 79 45.6
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 1.0e-06 57.4 71 45.1
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 1.7e-06 56.6 78 43.6
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 1.7e-06 56.6 71 45.1
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 3.0e-06 55.8 71 49.3
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 5.1e-06 55.1 86 39.5
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 5.1e-06 55.1 79 45.6
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 5.1e-06 55.1 77 45.5
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 6.6e-06 54.7 73 45.2
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 8.6e-06 54.3 71 47.9


User provided reference genes

Program Settings