Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 2.7e-62 241.9 130 100.0
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 5.2e-21 104.8 107 60.7
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 1.5e-20 103.2 115 58.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 2.0e-20 102.8 123 60.2
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 2.0e-20 102.8 96 66.7
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 7.6e-20 100.9 101 62.4
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 3.2e-18 95.5 91 59.3
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 7.1e-18 94.4 70 75.7
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 7.1e-18 94.4 69 73.9
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 1.6e-17 93.2 78 67.9
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 2.7e-17 92.4 125 48.8
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 2.7e-17 92.4 102 54.9
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.5e-17 92.0 102 57.8
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 3.9e-16 88.6 81 61.7
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 3.9e-16 88.6 83 63.9
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.5e-15 86.7 122 48.4
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 1.5e-15 86.7 102 52.0
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 3.3e-15 85.5 126 50.0
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 3.3e-15 85.5 124 46.8
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 3.3e-15 85.5 71 67.6
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 4.3e-15 85.1 141 44.7
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 7.3e-15 84.3 76 61.8
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 9.6e-15 84.0 80 57.5
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 2.1e-14 82.8 80 62.5
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 3.6e-14 82.0 83 57.8
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 6.2e-14 81.3 60 73.3
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 8.1e-14 80.9 110 52.7
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.1e-13 80.5 85 62.4
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.4e-13 80.1 99 54.5
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.4e-13 80.1 76 61.8
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 3.1e-13 79.0 144 45.8
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 4.0e-13 78.6 76 59.2
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 4.0e-13 78.6 71 64.8
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 5.3e-13 78.2 123 50.4
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 5.3e-13 78.2 125 45.6
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 5.3e-13 78.2 120 48.3
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 6.9e-13 77.8 69 63.8
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 6.9e-13 77.8 61 70.5
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 6.9e-13 77.8 61 70.5
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 6.9e-13 77.8 120 48.3
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 2.6e-12 75.9 123 46.3
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 2.6e-12 75.9 95 55.8
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 4.4e-12 75.1 81 53.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 5.8e-12 74.7 121 50.4
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 7.6e-12 74.3 74 59.5
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 7.6e-12 74.3 104 51.0
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 1.3e-11 73.6 77 57.1
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.8e-11 72.0 120 45.8
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 4.9e-11 71.6 103 46.6
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 1.1e-10 70.5 125 43.2
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 1.9e-10 69.7 60 68.3
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 1.9e-10 69.7 127 41.7
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 2.4e-10 69.3 76 53.9
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.2e-10 68.9 120 44.2
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 3.2e-10 68.9 132 43.9
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 4.2e-10 68.6 125 44.8
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.2e-09 67.0 138 41.3
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 2.7e-09 65.9 61 59.0
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 4.6e-09 65.1 70 52.9
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 7.8e-09 64.3 69 53.6
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 2.3e-08 62.8 75 50.7
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 5.1e-08 61.6 45 73.3
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 6.6e-08 61.2 115 45.2
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.1e-07 60.5 95 44.2
VMungo1080G1030 Vigna mungo HOM05D008143 ORTHO05D010256 7.3e-07 57.8 75 50.7
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 9.6e-07 57.4 59 59.3
Haze_02941 Corylus avellana HOM05D008143 ORTHO05D010256 1.3e-06 57.0 78 48.7
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 1.6e-06 56.6 70 52.9
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 4.8e-06 55.1 125 37.6


User provided reference genes

Program Settings