Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 3.9e-168 594.7 305 100.0
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 6.0e-92 341.7 189 94.7
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 3.0e-91 339.3 177 98.9
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.6e-82 308.5 190 84.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.4e-72 276.6 194 73.7
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 4.0e-72 275.8 190 76.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.2e-71 274.2 190 76.8
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 5.8e-71 271.9 190 74.7
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 8.4e-70 268.1 189 73.5
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.4e-69 267.3 189 73.0
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.4e-69 266.5 190 72.6
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 9.3e-69 264.6 194 71.6
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.2e-68 264.2 197 70.6
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 2.1e-68 263.5 197 70.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.5e-68 262.7 189 72.0
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.5e-68 262.7 189 72.0
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 3.5e-68 262.7 190 73.2
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 3.5e-68 262.7 189 70.9
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.5e-68 262.7 198 70.2
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 1.3e-67 260.8 191 72.8
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 3.0e-67 259.6 190 72.1
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 3.0e-67 259.6 190 70.0
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 8.7e-67 258.1 190 72.6
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.5e-66 257.3 193 72.5
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.5e-66 257.3 190 71.6
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.3e-65 254.2 191 70.7
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.7e-65 252.7 191 70.7
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 4.0e-64 249.2 203 67.5
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 9.0e-64 248.1 190 68.9
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.6e-63 246.5 190 68.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 4.5e-63 245.7 192 68.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 7.6e-63 245.0 190 67.9
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 7.6e-63 245.0 192 67.7
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 1.7e-62 243.8 190 67.9
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 3.8e-62 242.7 190 67.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 8.4e-62 241.5 200 65.5
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 2.4e-61 240.0 188 67.0
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 7.1e-61 238.4 190 68.9
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 7.1e-61 238.4 247 56.3
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.2e-60 237.7 237 57.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.6e-60 237.3 231 60.2
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 6.0e-60 235.3 192 65.6
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.0e-59 233.0 183 67.2
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 4.3e-58 229.2 213 62.0
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 4.3e-58 229.2 193 62.2
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 5.6e-58 228.8 224 56.2
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 9.6e-58 228.0 190 65.3
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.6e-57 227.3 189 61.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 2.1e-57 226.9 194 63.4
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.8e-57 226.5 235 56.6
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 6.2e-57 225.3 189 66.7
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 8.2e-57 224.9 190 65.8
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.1e-56 224.6 190 64.7
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 6.9e-56 221.9 190 62.6
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.3e-54 217.6 252 53.2
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.7e-54 217.2 190 63.2
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.9e-54 216.5 226 56.6
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.9e-54 216.5 186 59.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.4e-53 214.2 167 68.3
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 7.1e-53 211.8 189 60.3
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 7.1e-53 211.8 156 71.8
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 4.6e-52 209.1 192 58.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.8e-51 207.2 219 56.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 3.9e-51 206.1 187 57.2
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.9e-50 203.8 198 58.1
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 4.3e-50 202.6 140 75.7
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.1e-49 200.3 155 65.8
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.9e-48 195.3 210 55.2
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.2e-47 194.5 146 69.2
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 3.1e-40 169.9 189 47.1
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 1.2e-39 167.9 130 68.5
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 3.4e-39 166.4 181 47.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 6.5e-38 162.2 188 45.7
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 6.1e-36 155.6 232 39.2
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 9.7e-34 148.3 98 78.6
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 9.7e-34 148.3 113 67.3
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.0e-31 140.6 95 75.8
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 2.6e-31 140.2 97 74.2
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 6.5e-30 135.6 190 44.2
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.9e-29 134.0 96 69.8
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 3.9e-27 126.3 94 66.0
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 2.6e-23 113.6 59 98.3
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.5e-21 107.8 82 67.1
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 8.0e-20 102.1 73 69.9
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 5.2e-19 99.4 60 83.3
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 6.7e-19 99.0 84 59.5
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.1e-16 91.7 173 28.3
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.4e-16 90.5 178 28.1
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 5.9e-15 85.9 67 67.2
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 1.3e-09 68.2 46 73.9
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 2.0e-07 60.8 52 65.4
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 5.9e-07 59.3 55 54.5


User provided reference genes

Program Settings