Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-39 164.1 79 100.0
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 9.0e-24 113.2 59 98.3
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-23 110.9 60 95.0
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.3e-17 92.8 59 79.7
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 3.4e-15 84.7 59 74.6
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 4.5e-15 84.3 59 72.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 4.5e-15 84.3 58 72.4
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.5e-15 84.3 59 76.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 5.8e-15 84.0 59 76.3
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 7.6e-15 83.6 59 72.9
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 9.9e-15 83.2 59 74.6
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 1.7e-14 82.4 58 74.1
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.7e-14 82.4 59 69.5
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.7e-14 82.4 59 72.9
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.7e-14 82.4 64 70.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 2.2e-14 82.0 59 71.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 3.8e-14 81.3 59 71.2
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 3.8e-14 81.3 59 71.2
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 3.8e-14 81.3 58 72.4
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 4.9e-14 80.9 64 68.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 4.9e-14 80.9 59 69.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.9e-14 80.9 59 72.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 8.4e-14 80.1 58 69.0
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 8.4e-14 80.1 58 69.0
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 8.4e-14 80.1 58 69.0
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 8.4e-14 80.1 64 65.6
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.4e-13 79.3 58 69.0
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.9e-13 79.0 56 71.4
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 2.4e-13 78.6 59 71.2
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 4.2e-13 77.8 59 67.8
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 4.2e-13 77.8 59 72.9
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 4.2e-13 77.8 59 67.8
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 5.4e-13 77.4 59 69.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.4e-13 77.4 59 69.5
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.4e-13 77.4 59 69.5
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 5.4e-13 77.4 58 67.2
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 5.4e-13 77.4 59 66.1
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 7.1e-13 77.0 66 63.6
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 7.1e-13 77.0 64 64.1
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 7.1e-13 77.0 59 67.8
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 9.3e-13 76.6 58 67.2
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 1.2e-12 76.3 65 60.0
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.2e-12 76.3 58 70.7
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.6e-12 75.9 59 67.8
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 2.7e-12 75.1 59 66.1
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 3.5e-12 74.7 58 67.2
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.6e-12 74.3 59 67.8
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 7.9e-12 73.6 59 64.4
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.3e-11 72.0 64 59.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 3.0e-11 71.6 64 59.4
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 3.0e-11 71.6 64 56.2
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 6.7e-11 70.5 60 63.3
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 8.7e-11 70.1 53 67.9
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 8.7e-11 70.1 59 62.7
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.5e-10 69.3 56 66.1
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.5e-10 69.3 59 61.0
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.9e-10 68.9 59 64.4
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.5e-10 68.6 82 50.0
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.5e-10 68.6 59 62.7
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.3e-10 67.8 59 59.3
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.3e-09 66.2 59 55.9
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.1e-09 65.5 59 59.3
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.1e-09 65.5 58 58.6
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 3.7e-09 64.7 55 60.0
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 4.0e-08 61.2 59 57.6
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 5.3e-08 60.8 58 56.9
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.3e-08 60.8 75 48.0
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 9.0e-08 60.1 57 54.4
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.2e-07 59.7 53 58.5
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 4.5e-07 57.8 57 57.9
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.3e-06 56.2 63 44.4
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 6.4e-06 53.9 50 54.0


User provided reference genes

Program Settings