Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.7e-160 569.3 292 100.0
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 4.4e-92 342.0 247 76.9
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-91 340.5 189 94.7
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 2.2e-88 329.7 254 73.6
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.8e-85 320.1 231 75.3
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 7.5e-84 314.7 230 74.3
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 9.8e-84 314.3 256 69.5
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.3e-83 313.9 226 74.8
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 4.9e-83 312.0 210 78.1
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.1e-82 309.3 226 73.9
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 9.2e-82 307.8 240 70.4
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.0e-81 306.6 256 68.4
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 3.5e-81 305.8 223 73.5
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.3e-80 303.9 226 72.6
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.3e-80 303.9 226 72.6
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 3.8e-80 302.4 233 70.8
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 2.5e-79 299.7 252 66.3
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 9.5e-79 297.7 236 69.5
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 3.6e-78 295.8 209 74.2
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.4e-77 293.9 227 70.5
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.8e-77 293.5 231 70.6
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 3.0e-77 292.7 226 69.5
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 5.2e-77 292.0 251 66.9
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 2.2e-75 286.6 250 65.6
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 2.9e-75 286.2 246 66.3
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 9.2e-74 281.2 240 64.6
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 4.6e-73 278.9 227 69.2
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.0e-72 277.7 292 58.6
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.3e-72 276.6 217 67.3
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.0e-72 276.2 208 71.2
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.5e-71 273.1 208 70.2
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 3.3e-71 272.7 210 70.0
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 4.3e-71 272.3 249 60.2
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.6e-71 271.9 209 68.9
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 7.3e-71 271.6 210 69.0
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.6e-70 270.4 224 66.1
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.6e-70 270.4 210 68.6
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 8.0e-70 268.1 302 55.3
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 2.3e-69 266.5 187 76.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.1e-69 266.2 255 62.0
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.5e-68 263.8 243 60.1
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.0e-68 263.5 253 61.3
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 3.4e-68 262.7 235 64.3
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 9.8e-68 261.2 212 63.7
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 9.8e-68 261.2 233 63.1
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 3.2e-66 256.1 209 65.1
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 5.4e-66 255.4 263 57.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 2.7e-65 253.1 253 58.9
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 4.6e-65 252.3 233 63.1
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.3e-64 250.8 209 67.0
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.1e-63 247.7 191 69.1
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.9e-63 246.9 191 68.6
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 7.3e-63 245.0 209 63.2
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 9.5e-63 244.6 189 69.8
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 9.5e-63 244.6 249 58.2
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 8.1e-62 241.5 249 58.2
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.3e-61 240.0 183 69.4
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 5.2e-61 238.8 203 66.5
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 5.2e-61 238.8 212 58.0
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 1.3e-59 234.2 188 65.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.7e-59 233.8 271 54.2
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 4.9e-59 232.3 206 60.2
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.1e-58 229.2 191 66.5
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 3.5e-57 226.1 204 59.3
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 6.0e-57 225.3 195 63.1
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.7e-56 223.8 167 70.7
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 6.4e-51 205.3 145 72.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.3e-48 196.8 108 95.4
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-48 196.4 212 55.7
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 2.8e-46 189.9 207 47.3
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.4e-45 187.6 207 46.9
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 6.9e-45 185.3 205 45.4
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 3.8e-43 179.5 183 49.2
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 6.4e-43 178.7 129 71.3
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 1.6e-41 174.1 128 72.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.1e-41 173.7 122 75.4
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 2.7e-41 173.3 159 62.3
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.6e-36 156.8 98 82.7
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 3.3e-31 139.8 189 45.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 9.6e-31 138.3 96 71.9
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 3.1e-29 133.3 94 69.1
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 4.9e-27 125.9 96 74.0
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 9.6e-23 111.7 78 73.1
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-22 111.3 60 95.0
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 6.2e-22 109.0 80 71.2
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 7.6e-20 102.1 60 86.7
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 1.3e-19 101.3 196 29.1
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 6.5e-19 99.0 207 27.1
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.1e-18 98.2 83 59.0
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.9e-16 89.7 64 73.4
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.3e-14 84.7 63 77.8
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 1.4e-10 71.2 46 78.3
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 4.6e-09 66.2 65 55.4
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 7.9e-09 65.5 65 58.5
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 3.0e-08 63.5 52 69.2
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 2.5e-07 60.5 70 51.4
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.3e-07 60.1 78 50.0
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 4.8e-06 56.2 52 51.9


User provided reference genes

Program Settings