Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p020492 Quercus lobata HOM05D013570 ORTHO05D000001 3.9e-132 474.9 261 100.0
QL04p019972 Quercus lobata HOM05D013570 ORTHO05D000001 1.0e-87 327.4 202 93.1
QL04p020087 Quercus lobata HOM05D013570 ORTHO05D000001 1.2e-69 267.3 164 95.1
QL04p020203 Quercus lobata HOM05D013570 ORTHO05D000001 1.4e-49 200.7 127 91.3
QL02p033098 Quercus lobata HOM05D013570 ORTHO05D000001 3.1e-41 172.9 231 48.9
QL08p005220 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-33 145.2 211 41.7
QL02p051144 Quercus lobata HOM05D013570 ORTHO05D000001 5.2e-20 102.4 97 52.6
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 1.6e-16 90.9 200 32.0
QL01p029167 Quercus lobata HOM05D013570 ORTHO05D000001 5.1e-15 85.9 80 50.0
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 2.5e-14 83.6 93 43.0
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-13 80.9 152 33.6
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-13 80.1 148 33.8
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-13 79.3 89 42.7
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-13 79.0 152 33.6
TAR218G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.1e-13 78.6 92 45.7
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-12 76.6 87 43.7
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-12 76.3 87 43.7
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 4.0e-12 76.3 107 38.3
Dinv03566 Davidia involucrata HOM05D013570 ORTHO05D000001 6.8e-12 75.5 147 32.0
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 126 31.0
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-10 70.1 82 40.2
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.9e-10 70.1 130 28.5
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-10 69.7 134 29.9
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 6.4e-10 68.9 97 33.0
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-10 68.6 130 33.1
CsaV3_5G012380 Cucumis sativus L. HOM05D011982 ORTHO05D000001 1.1e-09 68.2 94 36.2
Hma1.2p1_0240F.1_g100220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-09 68.2 98 41.8
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-09 67.0 87 39.1
Rhsim02G0181800 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-09 67.0 94 37.2
RhsimUnG0073400 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.2e-09 66.6 87 36.8
QL08p032421 Quercus lobata HOM05D013570 ORTHO05D000001 4.1e-09 66.2 122 34.4
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-09 65.9 151 31.1
Rhsim06G0171300 Rhododendron simsii HOM05D001152 ORTHO05D000967 5.4e-09 65.9 135 32.6
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 7.1e-09 65.5 133 28.6
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-09 65.1 94 31.9
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-09 65.1 87 35.6
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-09 65.1 87 35.6
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-09 65.1 94 30.9
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 9.2e-09 65.1 92 34.8
RhsimUnG0128200 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.2e-09 65.1 87 35.6
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.7 87 34.5
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-08 64.7 92 35.9
Rhsim12G0142100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-08 64.3 152 28.3
Sed0015294 Sechium edule HOM05D011982 ORTHO05D000001 1.6e-08 64.3 125 33.6
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-08 64.3 129 28.7
CSS0018413 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.9 94 31.9
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.9 103 33.0
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.1e-08 63.9 137 32.8
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-08 63.9 98 29.6
Rhsim11G0082500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-08 63.5 87 37.9
CSS0011881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-08 63.2 94 31.9
RcHm_v2.0_Chr2g0156571 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-08 63.2 96 28.1
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-08 62.4 83 34.9
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 7.8e-08 62.0 139 26.6
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-08 62.0 86 36.0
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-08 62.0 87 34.5
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-07 61.6 94 29.8
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-07 61.6 92 34.8
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-07 61.6 114 26.3
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 1.0e-07 61.6 92 33.7
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-07 61.2 98 34.7
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-07 61.2 93 29.0
Actinidia03788 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.8 279 22.2
Rhsim06G0053500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-07 60.8 120 33.3
RcHm_v2.0_Chr7g0203981 Rosa chinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.8 97 29.9
Sed0021481 Sechium edule HOM05D000002 ORTHO05D000001 1.7e-07 60.8 94 33.0
CSS0019354 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 60.5 180 27.2
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-07 60.5 136 27.2
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 60.5 98 28.6
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 60.5 98 28.6
Rhsim03G0122100 Rhododendron simsii HOM05D000002 ORTHO05D031037 2.3e-07 60.5 87 35.6
Rhsim07G0051100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-07 60.5 147 29.3
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-07 60.5 97 28.9
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-07 60.5 94 29.8
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-07 60.5 89 31.5
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-07 60.1 93 31.2
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-07 60.1 102 36.3
Rhsim03G0181300 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.0e-07 60.1 81 38.3
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 3.9e-07 59.7 138 31.2
vmacro03720 Vaccinium macrocarpon HOM05D000002 ORTHO05D000001 3.9e-07 59.7 134 29.9
CsaV3_4G031840 Cucumis sativus L. HOM05D011982 ORTHO05D000001 5.1e-07 59.3 69 37.7
TPR.G33758 Trifolium pratense HOM05D001505 ORTHO05D000001 5.1e-07 59.3 167 28.7
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 5.1e-07 59.3 97 37.1
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.6e-07 58.9 87 33.3
Atru.chr10.287 Acer truncatum HOM05D000002 ORTHO05D017145 8.6e-07 58.5 92 34.8
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 8.6e-07 58.5 93 32.3
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 8.6e-07 58.5 92 37.0
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 8.6e-07 58.5 88 29.5
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.6e-07 58.5 90 36.7
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 1.1e-06 58.2 103 33.0
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 58.2 87 31.0
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 58.2 84 31.0
Rhsim01G0134800 Rhododendron simsii HOM05D002709 ORTHO05D002914 1.1e-06 58.2 94 33.0
Rhsim03G0193600 Rhododendron simsii HOM05D000100 ORTHO05D000052 1.1e-06 58.2 87 32.2
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-06 57.8 94 27.7
Rhsim02G0101900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-06 57.8 165 26.1
CSS0018860 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 80 32.5
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-06 57.4 93 29.0
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-06 57.4 93 29.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-06 57.4 92 37.0
Oeu062632.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-06 57.4 102 31.4
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-06 57.4 86 33.7
CSS0004364 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 57.0 84 33.3
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 3.3e-06 56.6 135 27.4
QL04p002317 Quercus lobata HOM05D013570 ORTHO05D000001 3.3e-06 56.6 44 59.1
CSS0032092 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 56.2 59 44.1
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.3e-06 56.2 92 29.3
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.3e-06 56.2 124 28.2
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-06 55.8 72 45.8
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-06 55.8 72 45.8
PSO063G7613 Papaver somniferum HOM05D000002 ORTHO05D000001 5.6e-06 55.8 114 28.1
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 5.6e-06 55.8 66 40.9
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.6e-06 55.8 95 28.4
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.6e-06 55.8 90 30.0
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 7.3e-06 55.5 198 23.2
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.3e-06 55.5 92 29.3
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.3e-06 55.5 96 32.3
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 7.3e-06 55.5 206 20.4
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 7.3e-06 55.5 93 36.6
MD12G1052500 Malus domestica HOM05D000002 ORTHO05D000001 7.3e-06 55.5 69 44.9
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 7.3e-06 55.5 87 28.7
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 7.3e-06 55.5 87 28.7
MD07G1259300 Malus domestica HOM05D000002 ORTHO05D000157 9.6e-06 55.1 70 41.4
MD11G1242500 Malus domestica HOM05D000002 ORTHO05D000001 9.6e-06 55.1 96 30.2


User provided reference genes

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