Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p020203 Quercus lobata HOM05D013570 ORTHO05D000001 2.1e-66 255.8 146 100.0
QL04p020087 Quercus lobata HOM05D013570 ORTHO05D000001 7.1e-51 204.1 127 92.9
QL04p020492 Quercus lobata HOM05D013570 ORTHO05D000001 2.3e-49 199.1 127 91.3
QL04p019972 Quercus lobata HOM05D013570 ORTHO05D000001 9.6e-48 193.7 126 87.3
QL08p005220 Quercus lobata HOM05D000002 ORTHO05D000001 9.1e-30 134.0 98 65.3
QL02p051144 Quercus lobata HOM05D013570 ORTHO05D000001 4.5e-21 105.1 105 51.4
QL02p033098 Quercus lobata HOM05D013570 ORTHO05D000001 3.3e-16 89.0 61 75.4
QL01p029167 Quercus lobata HOM05D013570 ORTHO05D000001 4.8e-15 85.1 80 50.0
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 2.4e-14 82.8 91 44.0
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-12 77.4 103 39.8
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.0e-12 77.4 92 42.4
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 1.0e-12 77.4 108 38.0
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-12 77.0 103 38.8
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-12 76.3 103 38.8
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-12 74.7 87 42.5
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-12 74.7 103 37.9
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-12 74.3 87 42.5
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 7.2e-11 71.2 98 33.7
CsaV3_5G012380 Cucumis sativus L. HOM05D011982 ORTHO05D000001 1.6e-10 70.1 95 36.8
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-10 67.8 82 39.0
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 8.0e-10 67.8 105 31.4
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 8.0e-10 67.8 97 33.0
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.0e-10 67.8 86 31.4
Rhsim06G0171300 Rhododendron simsii HOM05D001152 ORTHO05D000967 1.0e-09 67.4 103 35.0
Rhsim02G0181800 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-09 66.6 143 31.5
RhsimUnG0073400 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-09 66.6 92 35.9
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.3e-09 66.2 107 36.4
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 2.3e-09 66.2 101 34.7
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-09 65.9 87 36.8
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-09 65.5 93 32.3
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-09 65.1 87 34.5
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-09 65.1 87 37.9
RhsimUnG0128200 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-09 65.1 92 34.8
RcHm_v2.0_Chr2g0156571 Rosa chinensis HOM05D000002 ORTHO05D000001 5.2e-09 65.1 97 28.9
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 63.9 87 35.6
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 63.9 87 35.6
QL08p032421 Quercus lobata HOM05D013570 ORTHO05D000001 1.2e-08 63.9 97 38.1
Rhsim12G0142100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 97 34.0
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-08 63.5 89 32.6
Rhsim11G0082500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-08 63.2 92 37.0
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 2.0e-08 63.2 104 37.5
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.0e-08 63.2 90 32.2
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-08 62.8 87 33.3
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 2.6e-08 62.8 101 33.7
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 3.3e-08 62.4 83 34.9
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-08 62.4 106 34.0
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-08 62.4 89 36.0
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.3e-08 62.4 89 31.5
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-08 62.0 101 33.7
CSS0018413 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-08 62.0 87 34.5
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 4.4e-08 62.0 108 34.3
CSS0011881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-08 61.2 88 33.0
RcHm_v2.0_Chr7g0203981 Rosa chinensis HOM05D000002 ORTHO05D000001 7.5e-08 61.2 98 29.6
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.5e-08 61.2 91 37.4
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 9.7e-08 60.8 88 29.5
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 9.7e-08 60.8 98 28.6
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-07 60.5 96 28.1
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-07 60.5 89 31.5
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-07 60.5 103 35.9
Rhsim03G0181300 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.3e-07 60.5 84 38.1
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 91 31.9
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 100 32.0
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-07 60.1 88 29.5
Sed0021481 Sechium edule HOM05D000002 ORTHO05D000001 1.7e-07 60.1 94 33.0
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-07 59.7 87 36.8
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-07 59.7 86 34.9
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.8e-07 59.3 90 33.3
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 2.8e-07 59.3 101 31.7
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-07 58.9 93 31.2
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-07 58.9 91 33.0
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 3.7e-07 58.9 93 36.6
vmacro03720 Vaccinium macrocarpon HOM05D000002 ORTHO05D000001 3.7e-07 58.9 103 37.9
CsaV3_4G031840 Cucumis sativus L. HOM05D011982 ORTHO05D000001 4.8e-07 58.5 69 37.7
Rhsim07G0051100 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.8e-07 58.5 106 34.0
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-07 58.5 91 30.8
Rhsim03G0122100 Rhododendron simsii HOM05D000002 ORTHO05D031037 6.3e-07 58.2 87 34.5
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.3e-07 58.2 90 33.3
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 6.3e-07 58.2 94 29.8
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 8.2e-07 57.8 96 34.4
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 8.2e-07 57.8 93 36.6
Rhsim03G0193600 Rhododendron simsii HOM05D000100 ORTHO05D000052 8.2e-07 57.8 107 31.8
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 57.4 106 29.2
Rhsim01G0134800 Rhododendron simsii HOM05D002709 ORTHO05D002914 1.1e-06 57.4 92 32.6
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 105 28.6
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-06 57.4 80 32.5
CSS0018860 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 80 32.5
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.4e-06 57.0 90 30.0
MD11G1242500 Malus domestica HOM05D000002 ORTHO05D000001 1.4e-06 57.0 97 30.9
RcHm_v2.0_Chr1g0366871 Rosa chinensis HOM05D000062 ORTHO05D000043 1.8e-06 56.6 107 27.1
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-06 56.6 92 28.3
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-06 56.6 92 28.3
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 87 29.9
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-06 56.2 89 29.2
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-06 56.2 93 29.0
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-06 56.2 93 29.0
QL04p002317 Quercus lobata HOM05D013570 ORTHO05D000001 3.1e-06 55.8 44 59.1
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 4.1e-06 55.5 85 31.8
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.1e-06 55.5 98 30.6
vmacro07886 Vaccinium macrocarpon HOM05D000422 ORTHO05D011804 4.1e-06 55.5 106 33.0
MD17G1109500 Malus domestica HOM05D000002 ORTHO05D000001 5.3e-06 55.1 102 31.4
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 5.3e-06 55.1 85 30.6
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 7.0e-06 54.7 91 30.8
CSS0004364 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-06 54.7 84 32.1
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 7.0e-06 54.7 102 31.4
Oeu062632.1 Olea europaea HOM05D000002 ORTHO05D000001 7.0e-06 54.7 94 31.9
Rhsim06G0053500 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.0e-06 54.7 79 35.4
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 7.0e-06 54.7 92 28.3
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 9.1e-06 54.3 85 29.4
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 9.1e-06 54.3 90 30.0
TAR210G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.1e-06 54.3 95 29.5


User provided reference genes

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