Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p020087 Quercus lobata HOM05D013570 ORTHO05D000001 1.5e-76 289.7 167 100.0
QL04p020492 Quercus lobata HOM05D013570 ORTHO05D000001 1.3e-69 266.5 164 95.1
QL04p019972 Quercus lobata HOM05D013570 ORTHO05D000001 1.1e-68 263.5 164 92.7
QL04p020203 Quercus lobata HOM05D013570 ORTHO05D000001 4.8e-51 204.9 127 92.9
QL08p005220 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-32 142.1 211 41.2
QL02p051144 Quercus lobata HOM05D013570 ORTHO05D000001 8.8e-21 104.4 103 52.4
QL02p033098 Quercus lobata HOM05D013570 ORTHO05D000001 4.5e-17 92.0 61 77.0
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 8.5e-16 87.8 176 33.5
QL01p029167 Quercus lobata HOM05D013570 ORTHO05D000001 1.5e-15 87.0 80 51.2
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 8.0e-14 81.3 93 41.9
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-13 80.9 103 40.8
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-13 79.7 103 39.8
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-13 79.0 130 34.6
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-12 77.4 87 43.7
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-12 77.0 87 43.7
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-12 76.6 130 33.8
Dinv03566 Davidia involucrata HOM05D013570 ORTHO05D000001 4.4e-12 75.5 132 34.1
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 5.7e-12 75.1 107 37.4
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.2e-11 71.2 126 31.0
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-10 70.9 82 40.2
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.4e-10 69.7 130 28.5
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-10 68.9 87 40.2
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-10 68.2 103 36.9
CsaV3_5G012380 Cucumis sativus L. HOM05D011982 ORTHO05D000001 1.6e-09 67.0 94 36.2
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.0e-09 66.6 98 30.6
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 2.0e-09 66.6 100 35.0
Rhsim02G0181800 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-09 66.2 126 31.7
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-09 65.9 134 28.4
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.5e-09 65.5 130 27.7
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-09 65.1 103 33.0
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-09 64.7 134 31.3
RhsimUnG0073400 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.7e-09 64.7 87 35.6
CSS0011881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-08 64.3 94 31.9
Rhsim06G0171300 Rhododendron simsii HOM05D001152 ORTHO05D000967 1.3e-08 63.9 98 33.7
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.3e-08 63.9 129 28.7
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 87 34.5
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 86 37.2
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 87 34.5
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.2e-08 63.2 137 32.8
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 2.2e-08 63.2 100 34.0
RhsimUnG0128200 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.2e-08 63.2 87 34.5
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.9e-08 62.8 103 32.0
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 2.9e-08 62.8 83 34.9
Rhsim12G0142100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-08 62.8 92 34.8
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 2.9e-08 62.8 133 27.8
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-08 62.4 132 27.3
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-08 62.4 98 29.6
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-08 62.4 98 29.6
QL08p032421 Quercus lobata HOM05D013570 ORTHO05D000001 3.8e-08 62.4 135 33.3
Sed0015294 Sechium edule HOM05D011982 ORTHO05D000001 3.8e-08 62.4 125 32.8
CSS0018413 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 62.0 94 30.9
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.0e-08 62.0 94 29.8
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 5.0e-08 62.0 111 28.8
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-08 61.6 129 31.0
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 6.5e-08 61.6 114 26.3
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-08 61.6 136 27.9
RcHm_v2.0_Chr7g0203981 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-08 61.6 97 30.9
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.5e-08 61.2 102 30.4
RcHm_v2.0_Chr2g0156571 Rosa chinensis HOM05D000002 ORTHO05D000001 8.5e-08 61.2 96 27.1
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-07 60.8 107 33.6
Rhsim11G0082500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-07 60.8 99 36.4
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 1.1e-07 60.8 103 36.9
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.5 87 33.3
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-07 60.1 137 26.3
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 1.9e-07 60.1 84 32.1
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-07 60.1 93 28.0
Sed0021481 Sechium edule HOM05D000002 ORTHO05D000001 1.9e-07 60.1 94 31.9
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-07 60.1 101 30.7
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.5e-07 59.7 142 28.9
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-07 59.7 93 31.2
Rhsim03G0122100 Rhododendron simsii HOM05D000002 ORTHO05D031037 2.5e-07 59.7 87 34.5
Rhsim06G0053500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.5e-07 59.7 120 32.5
vmacro03720 Vaccinium macrocarpon HOM05D000002 ORTHO05D000001 2.5e-07 59.7 148 29.7
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 3.2e-07 59.3 102 36.3
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 3.2e-07 59.3 94 29.8
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.9 87 31.0
Rhsim07G0051100 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.2e-07 58.9 132 32.6
CSS0019354 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-07 58.5 177 27.1
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.5e-07 58.5 138 31.2
CSS0018860 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 58.2 80 32.5
CSS0032092 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 58.2 59 45.8
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-07 58.2 87 32.2
Rhsim03G0193600 Rhododendron simsii HOM05D000100 ORTHO05D000052 7.2e-07 58.2 101 32.7
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.2e-07 58.2 90 36.7
CSS0004364 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-07 57.8 84 33.3
Oeu062632.1 Olea europaea HOM05D000002 ORTHO05D000001 9.4e-07 57.8 102 31.4
Rhsim03G0181300 Rhododendron simsii HOM05D000071 ORTHO05D000029 9.4e-07 57.8 81 37.0
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 9.4e-07 57.8 88 29.5
TPR.G33758 Trifolium pratense HOM05D001505 ORTHO05D000001 9.4e-07 57.8 127 30.7
CsaV3_4G031840 Cucumis sativus L. HOM05D011982 ORTHO05D000001 1.2e-06 57.4 69 36.2
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-06 57.4 93 29.0
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-06 57.4 93 29.0
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 1.2e-06 57.4 95 29.5
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 1.6e-06 57.0 103 32.0
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-06 57.0 92 35.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.6e-06 57.0 138 28.3
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 56.6 92 37.0
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-06 56.6 86 32.6
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-06 56.6 92 29.3
QL04p002317 Quercus lobata HOM05D013570 ORTHO05D000001 2.7e-06 56.2 44 59.1
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 2.7e-06 56.2 87 28.7
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.7e-06 56.2 87 28.7
Actinidia03788 Actinidia chinensis HOM05D000002 ORTHO05D000001 4.7e-06 55.5 106 29.2
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 4.7e-06 55.5 102 32.4
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.7e-06 55.5 90 30.0
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.1e-06 55.1 96 32.3
PSO063G7613 Papaver somniferum HOM05D000002 ORTHO05D000001 6.1e-06 55.1 114 28.1
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.7 92 28.3
Rhsim01G0134800 Rhododendron simsii HOM05D002709 ORTHO05D002914 8.0e-06 54.7 94 30.9
RcHm_v2.0_Chr1g0366871 Rosa chinensis HOM05D000062 ORTHO05D000043 8.0e-06 54.7 91 26.4
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 8.0e-06 54.7 80 32.5


User provided reference genes

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