Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p019987 Quercus lobata HOM05D000639 ORTHO05D007519 8.6e-81 303.5 146 100.0
QL04p019730 Quercus lobata HOM05D000639 ORTHO05D007519 6.2e-79 297.4 146 97.9
QL04p019592 Quercus lobata HOM05D000639 ORTHO05D007519 1.5e-77 292.7 146 96.6
QL04p020223 Quercus lobata HOM05D000639 ORTHO05D007519 4.6e-66 254.6 132 95.5
Cfa010945 Carpinus fangiana HOM05D000639 ORTHO05D007519 1.3e-57 226.5 146 75.3
CiPaw.13G015500 Carya illinoinensis HOM05D000639 ORTHO05D007519 2.8e-55 218.8 146 74.0
Cpa.g.sc169.35 Carica papaya HOM05D000639 ORTHO05D007519 4.0e-54 214.9 145 71.7
Prupe.2G042600 Prunus persica HOM05D000639 ORTHO05D007519 4.9e-52 208.0 145 67.6
FvH4_7g03650 Fragaria vesca HOM05D000639 ORTHO05D007519 1.9e-51 206.1 145 69.0
FAN06G0539 Fragaria x ananassa HOM05D000639 ORTHO05D007519 1.9e-51 206.1 145 69.0
RcHm_v2.0_Chr1g0326421 Rosa chinensis HOM05D000639 ORTHO05D007519 1.9e-51 206.1 145 68.3
Gohir.A05G283300 Gossypium hirsutum HOM05D000639 ORTHO05D007519 3.2e-51 205.3 145 69.0
TAR633G0611 Trochodendron aralioides HOM05D000639 ORTHO05D007519 3.2e-51 205.3 145 69.7
Dinv32012 Davidia involucrata HOM05D000639 ORTHO05D007519 5.5e-51 204.5 146 69.2
TAR633G2471 Trochodendron aralioides HOM05D000639 ORTHO05D007519 9.3e-51 203.8 145 69.0
CSS0034880 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D007519 1.2e-50 203.4 145 66.2
FAN03G1836 Fragaria x ananassa HOM05D000639 ORTHO05D007519 2.1e-50 202.6 145 68.3
Rhsim07G0068700 Rhododendron simsii HOM05D000639 ORTHO05D007519 2.1e-50 202.6 146 66.4
CANSAT56G3383 Cannabis sativa HOM05D000639 ORTHO05D007519 2.7e-50 202.2 145 66.9
RcHm_v2.0_Chr1g0326481 Rosa chinensis HOM05D000639 ORTHO05D007519 2.7e-50 202.2 145 67.6
TWI15G0515 Tripterygium wilfordii HOM05D000639 ORTHO05D007519 2.7e-50 202.2 145 66.9
FAN10G4100 Fragaria x ananassa HOM05D000639 ORTHO05D007519 3.5e-50 201.8 145 69.0
MD07G1046100 Malus domestica HOM05D000639 ORTHO05D007519 6.0e-50 201.1 145 66.9
Potri.001G030200 Populus trichocarpa HOM05D000639 ORTHO05D007519 7.9e-50 200.7 146 69.9
TAR636G2666 Trochodendron aralioides HOM05D000639 ORTHO05D007519 1.0e-49 200.3 145 68.3
Actinidia10146 Actinidia chinensis HOM05D000639 ORTHO05D007519 1.3e-49 199.9 145 66.9
Sabra01G0021700 Salix brachista HOM05D000639 ORTHO05D007519 1.3e-49 199.9 145 66.9
Sed0017460 Sechium edule HOM05D000639 ORTHO05D007519 1.8e-49 199.5 145 66.9
Haze_03001 Corylus avellana HOM05D000639 ORTHO05D007519 3.9e-49 198.4 133 76.7
Nn7g36776 Nelumbo nucifera HOM05D000639 ORTHO05D007519 5.1e-49 198.0 145 67.6
MELO3C012491.2 Cucumis melo HOM05D000639 ORTHO05D007519 6.7e-49 197.6 145 66.9
Gohir.D05G284300 Gossypium hirsutum HOM05D000639 ORTHO05D007519 6.7e-49 197.6 145 65.5
Gorai.009G298900 Gossypium raimondii HOM05D000639 ORTHO05D007519 6.7e-49 197.6 145 65.5
Hma1.2p1_1730F.1_g299690 Hydrangea macrophylla HOM05D000639 ORTHO05D007519 6.7e-49 197.6 141 68.8
ClCG05G026980 Citrullus lanatus HOM05D000639 ORTHO05D007519 1.1e-48 196.8 145 66.9
vmacro13765 Vaccinium macrocarpon HOM05D000639 ORTHO05D007519 1.5e-48 196.4 146 65.8
Duzib128G0348 Durio zibethinus HOM05D000639 ORTHO05D007519 1.9e-48 196.1 145 65.5
COL.COLO4_20723 Corchorus olitorius HOM05D000639 ORTHO05D007519 2.5e-48 195.7 145 66.9
Thecc.10G145300 Theobroma cacao HOM05D000639 ORTHO05D007519 3.3e-48 195.3 145 66.2
Eucgr.G03214 Eucalyptus grandis HOM05D000639 ORTHO05D007519 5.6e-48 194.5 145 66.2
CsaV3_5G036920 Cucumis sativus L. HOM05D000639 ORTHO05D007519 1.3e-47 193.4 145 66.2
Lj3g0017509 Lotus japonicus HOM05D000639 ORTHO05D007519 4.8e-47 191.4 146 64.4
Aqoxy1G00391 Aquilegia oxysepala HOM05D000639 ORTHO05D007519 1.1e-46 190.3 142 69.0
GSVIVG01036648001 Vitis vinifera HOM05D000639 ORTHO05D007519 1.1e-46 190.3 147 61.9
Manes.04G156800 Manihot esculenta HOM05D000639 ORTHO05D007519 5.3e-46 188.0 146 64.4
Psat5g222040 Pisum sativum HOM05D000639 ORTHO05D007519 5.3e-46 188.0 146 63.0
EL10Ac2g02719 Beta vulgaris HOM05D000639 ORTHO05D007519 2.6e-45 185.7 145 62.1
Ca_12955_v3 Cicer arietinum L. HOM05D000639 ORTHO05D007519 5.8e-45 184.5 146 61.6
Oeu013078.1 Olea europaea HOM05D000639 ORTHO05D007519 7.6e-45 184.1 146 60.3
PSO384G1239 Papaver somniferum HOM05D000639 ORTHO05D007519 7.6e-45 184.1 145 64.1
PSO339G5515 Papaver somniferum HOM05D000639 ORTHO05D007519 1.3e-44 183.3 145 64.1
THA.LOC104799324 Tarenaya hassleriana HOM05D000639 ORTHO05D007519 1.3e-44 183.3 146 62.3
A05p37090 Brassica napus HOM05D000639 ORTHO05D007519 1.7e-44 183.0 147 61.2
AT3G12270 Arabidopsis thaliana HOM05D000639 ORTHO05D007519 2.9e-44 182.2 147 64.6
Medtr3g013960 Medicago truncatula HOM05D000639 ORTHO05D007519 3.8e-44 181.8 145 60.0
Carub.0003s1163 Capsella rubella HOM05D000639 ORTHO05D007519 4.9e-44 181.4 147 61.9
BolC5t34218H Brassica oleracea HOM05D000639 ORTHO05D007519 6.5e-44 181.0 147 59.9
C05p55520 Brassica napus HOM05D000639 ORTHO05D007519 8.4e-44 180.6 144 61.1
BraA05t22506Z Brassica rapa HOM05D000639 ORTHO05D007519 8.4e-44 180.6 147 60.5
TPR.G1436 Trifolium pratense HOM05D000639 ORTHO05D007519 1.1e-43 180.3 146 61.0
Sp3g10490 Schrenkiella parvula HOM05D000639 ORTHO05D007519 1.4e-43 179.9 147 60.5
MBI19_g20786_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D007519 1.9e-43 179.5 145 62.1
MBI19_g36133_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D007519 1.9e-43 179.5 145 62.1
DCAR_029712 Daucus carota HOM05D000639 ORTHO05D007519 2.5e-43 179.1 145 60.0
AL3G23930 Arabidopsis lyrata HOM05D000639 ORTHO05D007519 4.2e-43 178.3 147 59.9
Thhalv10020338m.g Eutrema salsugineum HOM05D000639 ORTHO05D007519 4.2e-43 178.3 147 60.5
HanXRQChr10g0309811 Helianthus annuus HOM05D000639 ORTHO05D007519 4.2e-43 178.3 145 61.4
AUR62031686 Chenopodium quinoa HOM05D000639 ORTHO05D007519 7.1e-43 177.6 145 59.3
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 7.1e-43 177.6 145 59.3
Oeu013071.1 Olea europaea HOM05D000639 ORTHO05D007519 1.2e-42 176.8 141 60.3
arahy.Tifrunner.gnm1.ann1.H9Y2LD Arachis hypogaea HOM05D000639 ORTHO05D007519 2.7e-42 175.6 149 59.7
CARHR086820 Cardamine hirsuta HOM05D000639 ORTHO05D007519 2.7e-42 175.6 147 60.5
Cc03_g04310 Coffea canephora HOM05D000639 ORTHO05D007519 2.7e-42 175.6 146 56.8
VMungo1080G1346 Vigna mungo HOM05D000639 ORTHO05D007519 2.7e-42 175.6 146 59.6
CAN.G134.14 Capsicum annuum HOM05D000639 ORTHO05D007519 3.5e-42 175.3 146 59.6
Nitab4.5_0005420g0030 Nicotiana tabacum HOM05D000639 ORTHO05D007519 4.6e-42 174.9 146 60.3
Lalb_Chr25g0281741 Lupinus albus HOM05D000639 ORTHO05D007519 6.0e-42 174.5 147 59.2
Sc10g0004550 Simmondsia chinensis HOM05D000639 ORTHO05D007519 6.0e-42 174.5 145 55.9
Aa31LG3G6490 Aethionema arabicum HOM05D000639 ORTHO05D007519 7.9e-42 174.1 146 58.9
Ah.10g029870 Amaranthus hybridus HOM05D000639 ORTHO05D007519 1.0e-41 173.7 145 61.4
Glyma.11G157700 Glycine max HOM05D000639 ORTHO05D007519 1.0e-41 173.7 148 61.5
AUR62032569 Chenopodium quinoa HOM05D000639 ORTHO05D007519 1.3e-41 173.3 145 57.9
arahy.Tifrunner.gnm1.ann1.P73KK2 Arachis hypogaea HOM05D000639 ORTHO05D007519 1.8e-41 172.9 149 59.7
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 2.3e-41 172.6 138 64.5
MSTRG.16980 Avicennia marina HOM05D000639 ORTHO05D007519 2.3e-41 172.6 148 60.1
A03p37560 Brassica napus HOM05D000639 ORTHO05D007519 3.9e-41 171.8 147 57.8
BraA03t12910Z Brassica rapa HOM05D000639 ORTHO05D007519 3.9e-41 171.8 147 57.8
Peaxi162Scf00082g00019 Petunia axillaris HOM05D000639 ORTHO05D007519 3.9e-41 171.8 147 55.1
Glyma.04G133900 Glycine max HOM05D000639 ORTHO05D007519 6.7e-41 171.0 147 59.9
Lj9A657G26 Lonicera japonica HOM05D000639 ORTHO05D007519 6.7e-41 171.0 151 55.6
BcaC01g04056 Brassica carinata HOM05D000639 ORTHO05D007519 8.7e-41 170.6 147 58.5
BolC3t16832H Brassica oleracea HOM05D000639 ORTHO05D007519 8.7e-41 170.6 147 58.5
PGSC0003DMG401003285 Solanum tuberosum HOM05D000639 ORTHO05D007519 1.1e-40 170.2 146 57.5
HPP92_001699 Vanilla planifolia HOM05D000639 ORTHO05D007519 1.5e-40 169.9 145 58.6
Solyc01g096550.3 Solanum lycopersicum HOM05D000639 ORTHO05D007519 2.5e-40 169.1 146 57.5
Sopen01g040280 Solanum pennellii HOM05D000639 ORTHO05D007519 3.3e-40 168.7 146 57.5
PGR031G3760 Punica granatum HOM05D000639 ORTHO05D007519 7.4e-40 167.5 147 62.6
SalBow6G5029 Salvia bowleyana HOM05D000639 ORTHO05D007519 7.4e-40 167.5 146 56.8
Phvul.005G024700 Phaseolus vulgaris HOM05D000639 ORTHO05D007519 1.3e-39 166.8 110 70.9
Migut.N01856 Erythranthe guttata HOM05D000639 ORTHO05D007519 1.6e-39 166.4 146 54.8
Zm00001eb307260 Zea mays HOM05D000639 ORTHO05D007519 2.8e-39 165.6 145 59.3
Os07g0640000 Oryza sativa ssp. japonica HOM05D000639 ORTHO05D007519 3.7e-39 165.2 145 57.2
C03p45550 Brassica napus HOM05D000639 ORTHO05D007519 4.8e-39 164.9 147 57.1
Hund13389 Selenicereus undatus HOM05D000639 ORTHO05D007519 4.5e-37 158.3 144 54.9
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 1.3e-36 156.8 149 53.7
ATR1096G043 Amborella trichopoda HOM05D000639 ORTHO05D007519 3.8e-36 155.2 151 54.3
CDE02G3921 Ceratophyllum demersum HOM05D000639 ORTHO05D007519 5.0e-36 154.8 145 54.5
SGA_v2.0_scaffold232G43485 Striga asiatica HOM05D000639 ORTHO05D007519 2.1e-34 149.4 146 55.5
SGA_v2.0_scaffold43G16282 Striga asiatica HOM05D000639 ORTHO05D007519 2.7e-34 149.1 145 53.8
SEGI_34036 Sequoiadendron giganteum HOM05D000639 ORTHO05D007519 1.4e-33 146.7 113 61.9
Ciclev10000650m.g Citrus clementina HOM05D000639 ORTHO05D007519 3.9e-33 145.2 145 53.1
unitig_0.g2300 Utricularia gibba HOM05D000639 ORTHO05D007519 7.4e-32 141.0 149 51.7
QL04p020506 Quercus lobata HOM05D000639 ORTHO05D007519 8.2e-31 137.5 66 97.0
Pp3c22_9680 Physcomitrium patens HOM05D000639 ORTHO05D007519 4.1e-30 135.2 147 48.3
Mapoly0032s0165 Marchantia polymorpha HOM05D000639 ORTHO05D007519 5.0e-28 128.3 157 46.5
CBR_g3764 Chara braunii HOM05D000639 ORTHO05D007519 1.4e-27 126.7 140 50.0
SMO111G0077 Selaginella moellendorffii HOM05D000639 ORTHO05D007519 4.2e-27 125.2 146 47.3
BcaB04g18688 Brassica carinata HOM05D000639 ORTHO05D007519 1.8e-25 119.8 111 55.0
ATR0559G017 Amborella trichopoda HOM05D000639 ORTHO05D007519 1.7e-20 103.2 82 61.0
MCO05G494 Micromonas commoda HOM05D000639 ORTHO05D007519 5.2e-17 91.7 107 43.9
Cre16.g685900 Chlamydomonas reinhardtii HOM05D000639 ORTHO05D007519 1.3e-12 77.0 146 38.4
PRCOL_00006047 Prasinoderma coloniale HOM05D000639 ORTHO05D007519 6.7e-09 64.7 146 32.9


User provided reference genes

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