Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p019730 Quercus lobata HOM05D000639 ORTHO05D007519 1.7e-81 305.8 146 100.0
QL04p019987 Quercus lobata HOM05D000639 ORTHO05D007519 3.6e-79 298.1 146 97.9
QL04p019592 Quercus lobata HOM05D000639 ORTHO05D007519 8.1e-79 297.0 146 97.3
QL04p020223 Quercus lobata HOM05D000639 ORTHO05D007519 2.4e-67 258.8 132 96.2
Cfa010945 Carpinus fangiana HOM05D000639 ORTHO05D007519 9.3e-59 230.3 146 76.0
CiPaw.13G015500 Carya illinoinensis HOM05D000639 ORTHO05D007519 6.7e-57 224.2 146 75.3
Cpa.g.sc169.35 Carica papaya HOM05D000639 ORTHO05D007519 2.8e-55 218.8 145 72.4
Prupe.2G042600 Prunus persica HOM05D000639 ORTHO05D007519 2.4e-54 215.7 145 69.0
Dinv32012 Davidia involucrata HOM05D000639 ORTHO05D007519 2.6e-53 212.2 146 70.5
RcHm_v2.0_Chr1g0326421 Rosa chinensis HOM05D000639 ORTHO05D007519 2.6e-53 212.2 145 69.7
CSS0034880 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D007519 7.6e-53 210.7 145 67.6
TAR633G0611 Trochodendron aralioides HOM05D000639 ORTHO05D007519 7.6e-53 210.7 145 71.0
Rhsim07G0068700 Rhododendron simsii HOM05D000639 ORTHO05D007519 9.9e-53 210.3 146 67.8
CANSAT56G3383 Cannabis sativa HOM05D000639 ORTHO05D007519 1.3e-52 209.9 145 68.3
FvH4_7g03650 Fragaria vesca HOM05D000639 ORTHO05D007519 1.3e-52 209.9 145 69.7
FAN06G0539 Fragaria x ananassa HOM05D000639 ORTHO05D007519 1.3e-52 209.9 145 69.7
TAR633G2471 Trochodendron aralioides HOM05D000639 ORTHO05D007519 2.2e-52 209.1 145 70.3
Gohir.A05G283300 Gossypium hirsutum HOM05D000639 ORTHO05D007519 3.8e-52 208.4 145 69.7
RcHm_v2.0_Chr1g0326481 Rosa chinensis HOM05D000639 ORTHO05D007519 3.8e-52 208.4 145 69.0
Actinidia10146 Actinidia chinensis HOM05D000639 ORTHO05D007519 6.4e-52 207.6 145 68.3
MD07G1046100 Malus domestica HOM05D000639 ORTHO05D007519 8.4e-52 207.2 145 68.3
FAN03G1836 Fragaria x ananassa HOM05D000639 ORTHO05D007519 1.4e-51 206.5 145 69.0
TWI15G0515 Tripterygium wilfordii HOM05D000639 ORTHO05D007519 1.4e-51 206.5 145 67.6
FAN10G4100 Fragaria x ananassa HOM05D000639 ORTHO05D007519 2.4e-51 205.7 145 69.7
TAR636G2666 Trochodendron aralioides HOM05D000639 ORTHO05D007519 2.4e-51 205.7 145 69.7
Nn7g36776 Nelumbo nucifera HOM05D000639 ORTHO05D007519 3.2e-51 205.3 145 69.0
Potri.001G030200 Populus trichocarpa HOM05D000639 ORTHO05D007519 4.2e-51 204.9 146 70.5
Sabra01G0021700 Salix brachista HOM05D000639 ORTHO05D007519 7.1e-51 204.1 145 67.6
Sed0017460 Sechium edule HOM05D000639 ORTHO05D007519 1.2e-50 203.4 145 66.9
MELO3C012491.2 Cucumis melo HOM05D000639 ORTHO05D007519 1.6e-50 203.0 145 67.6
ClCG05G026980 Citrullus lanatus HOM05D000639 ORTHO05D007519 2.7e-50 202.2 145 67.6
Haze_03001 Corylus avellana HOM05D000639 ORTHO05D007519 2.7e-50 202.2 133 77.4
vmacro13765 Vaccinium macrocarpon HOM05D000639 ORTHO05D007519 3.5e-50 201.8 146 66.4
Duzib128G0348 Durio zibethinus HOM05D000639 ORTHO05D007519 4.6e-50 201.4 145 66.9
Hma1.2p1_1730F.1_g299690 Hydrangea macrophylla HOM05D000639 ORTHO05D007519 4.6e-50 201.4 141 68.8
Gohir.D05G284300 Gossypium hirsutum HOM05D000639 ORTHO05D007519 7.9e-50 200.7 145 66.2
Gorai.009G298900 Gossypium raimondii HOM05D000639 ORTHO05D007519 7.9e-50 200.7 145 66.2
Thecc.10G145300 Theobroma cacao HOM05D000639 ORTHO05D007519 7.9e-50 200.7 145 67.6
Eucgr.G03214 Eucalyptus grandis HOM05D000639 ORTHO05D007519 1.0e-49 200.3 145 67.6
COL.COLO4_20723 Corchorus olitorius HOM05D000639 ORTHO05D007519 1.3e-49 199.9 145 66.9
CsaV3_5G036920 Cucumis sativus L. HOM05D000639 ORTHO05D007519 1.8e-49 199.5 145 67.6
Lj3g0017509 Lotus japonicus HOM05D000639 ORTHO05D007519 1.5e-48 196.4 146 65.1
GSVIVG01036648001 Vitis vinifera HOM05D000639 ORTHO05D007519 2.5e-48 195.7 147 63.3
Aqoxy1G00391 Aquilegia oxysepala HOM05D000639 ORTHO05D007519 4.3e-48 194.9 142 69.7
Manes.04G156800 Manihot esculenta HOM05D000639 ORTHO05D007519 1.6e-47 193.0 146 65.1
EL10Ac2g02719 Beta vulgaris HOM05D000639 ORTHO05D007519 4.8e-47 191.4 145 63.4
Psat5g222040 Pisum sativum HOM05D000639 ORTHO05D007519 4.8e-47 191.4 146 63.7
Oeu013078.1 Olea europaea HOM05D000639 ORTHO05D007519 1.8e-46 189.5 146 61.0
PSO384G1239 Papaver somniferum HOM05D000639 ORTHO05D007519 3.1e-46 188.7 145 64.8
Ca_12955_v3 Cicer arietinum L. HOM05D000639 ORTHO05D007519 4.0e-46 188.3 146 61.6
PSO339G5515 Papaver somniferum HOM05D000639 ORTHO05D007519 5.3e-46 188.0 145 64.8
Medtr3g013960 Medicago truncatula HOM05D000639 ORTHO05D007519 9.0e-46 187.2 145 60.7
A05p37090 Brassica napus HOM05D000639 ORTHO05D007519 1.2e-45 186.8 147 61.9
AT3G12270 Arabidopsis thaliana HOM05D000639 ORTHO05D007519 2.0e-45 186.0 147 65.3
MBI19_g20786_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D007519 2.6e-45 185.7 145 63.4
MBI19_g36133_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D007519 2.6e-45 185.7 145 63.4
Carub.0003s1163 Capsella rubella HOM05D000639 ORTHO05D007519 3.4e-45 185.3 147 62.6
TPR.G1436 Trifolium pratense HOM05D000639 ORTHO05D007519 3.4e-45 185.3 146 61.6
C05p55520 Brassica napus HOM05D000639 ORTHO05D007519 4.5e-45 184.9 144 61.8
BolC5t34218H Brassica oleracea HOM05D000639 ORTHO05D007519 4.5e-45 184.9 147 60.5
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 4.5e-45 184.9 145 60.7
THA.LOC104799324 Tarenaya hassleriana HOM05D000639 ORTHO05D007519 4.5e-45 184.9 146 62.3
BraA05t22506Z Brassica rapa HOM05D000639 ORTHO05D007519 5.8e-45 184.5 147 61.2
DCAR_029712 Daucus carota HOM05D000639 ORTHO05D007519 5.8e-45 184.5 145 60.7
HanXRQChr10g0309811 Helianthus annuus HOM05D000639 ORTHO05D007519 7.6e-45 184.1 145 62.1
Sp3g10490 Schrenkiella parvula HOM05D000639 ORTHO05D007519 1.0e-44 183.7 147 61.2
AUR62031686 Chenopodium quinoa HOM05D000639 ORTHO05D007519 1.7e-44 183.0 145 60.7
Oeu013071.1 Olea europaea HOM05D000639 ORTHO05D007519 2.2e-44 182.6 141 61.0
AL3G23930 Arabidopsis lyrata HOM05D000639 ORTHO05D007519 2.9e-44 182.2 147 60.5
Thhalv10020338m.g Eutrema salsugineum HOM05D000639 ORTHO05D007519 2.9e-44 182.2 147 61.2
arahy.Tifrunner.gnm1.ann1.H9Y2LD Arachis hypogaea HOM05D000639 ORTHO05D007519 8.4e-44 180.6 149 60.4
CAN.G134.14 Capsicum annuum HOM05D000639 ORTHO05D007519 8.4e-44 180.6 146 60.3
Cc03_g04310 Coffea canephora HOM05D000639 ORTHO05D007519 8.4e-44 180.6 146 57.5
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 1.1e-43 180.3 138 65.9
Nitab4.5_0005420g0030 Nicotiana tabacum HOM05D000639 ORTHO05D007519 1.1e-43 180.3 146 61.0
CARHR086820 Cardamine hirsuta HOM05D000639 ORTHO05D007519 1.4e-43 179.9 147 61.2
Sc10g0004550 Simmondsia chinensis HOM05D000639 ORTHO05D007519 1.9e-43 179.5 145 56.6
Ah.10g029870 Amaranthus hybridus HOM05D000639 ORTHO05D007519 2.5e-43 179.1 145 60.7
Lalb_Chr25g0281741 Lupinus albus HOM05D000639 ORTHO05D007519 2.5e-43 179.1 147 59.9
arahy.Tifrunner.gnm1.ann1.P73KK2 Arachis hypogaea HOM05D000639 ORTHO05D007519 5.5e-43 177.9 149 60.4
AUR62032569 Chenopodium quinoa HOM05D000639 ORTHO05D007519 7.1e-43 177.6 145 58.6
VMungo1080G1346 Vigna mungo HOM05D000639 ORTHO05D007519 7.1e-43 177.6 146 59.6
Aa31LG3G6490 Aethionema arabicum HOM05D000639 ORTHO05D007519 9.3e-43 177.2 146 59.6
Peaxi162Scf00082g00019 Petunia axillaris HOM05D000639 ORTHO05D007519 9.3e-43 177.2 147 55.8
MSTRG.16980 Avicennia marina HOM05D000639 ORTHO05D007519 1.2e-42 176.8 146 59.6
Glyma.04G133900 Glycine max HOM05D000639 ORTHO05D007519 1.6e-42 176.4 147 60.5
Glyma.11G157700 Glycine max HOM05D000639 ORTHO05D007519 2.1e-42 176.0 148 61.5
PGSC0003DMG401003285 Solanum tuberosum HOM05D000639 ORTHO05D007519 2.7e-42 175.6 146 58.2
A03p37560 Brassica napus HOM05D000639 ORTHO05D007519 3.5e-42 175.3 147 58.5
BraA03t12910Z Brassica rapa HOM05D000639 ORTHO05D007519 3.5e-42 175.3 147 58.5
Lj9A657G26 Lonicera japonica HOM05D000639 ORTHO05D007519 3.5e-42 175.3 151 56.3
Solyc01g096550.3 Solanum lycopersicum HOM05D000639 ORTHO05D007519 6.0e-42 174.5 146 58.2
BcaC01g04056 Brassica carinata HOM05D000639 ORTHO05D007519 7.9e-42 174.1 147 59.2
BolC3t16832H Brassica oleracea HOM05D000639 ORTHO05D007519 7.9e-42 174.1 147 59.2
Sopen01g040280 Solanum pennellii HOM05D000639 ORTHO05D007519 7.9e-42 174.1 146 58.2
SalBow6G5029 Salvia bowleyana HOM05D000639 ORTHO05D007519 1.0e-41 173.7 146 57.5
HPP92_001699 Vanilla planifolia HOM05D000639 ORTHO05D007519 2.3e-41 172.6 148 59.5
PGR031G3760 Punica granatum HOM05D000639 ORTHO05D007519 5.1e-41 171.4 147 63.3
Migut.N01856 Erythranthe guttata HOM05D000639 ORTHO05D007519 8.7e-41 170.6 146 54.8
Os07g0640000 Oryza sativa ssp. japonica HOM05D000639 ORTHO05D007519 1.1e-40 170.2 145 56.6
C03p45550 Brassica napus HOM05D000639 ORTHO05D007519 4.3e-40 168.3 147 57.8
Phvul.005G024700 Phaseolus vulgaris HOM05D000639 ORTHO05D007519 4.3e-40 168.3 110 70.9
Zm00001eb307260 Zea mays HOM05D000639 ORTHO05D007519 3.7e-39 165.2 145 58.6
Hund13389 Selenicereus undatus HOM05D000639 ORTHO05D007519 3.1e-38 162.2 135 58.5
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 1.2e-37 160.2 149 54.4
ATR1096G043 Amborella trichopoda HOM05D000639 ORTHO05D007519 2.6e-37 159.1 151 54.3
CDE02G3921 Ceratophyllum demersum HOM05D000639 ORTHO05D007519 4.5e-37 158.3 145 55.2
SGA_v2.0_scaffold43G16282 Striga asiatica HOM05D000639 ORTHO05D007519 2.5e-35 152.5 145 54.5
SGA_v2.0_scaffold232G43485 Striga asiatica HOM05D000639 ORTHO05D007519 4.2e-35 151.8 146 55.5
SEGI_34036 Sequoiadendron giganteum HOM05D000639 ORTHO05D007519 2.1e-34 149.4 114 62.3
unitig_0.g2300 Utricularia gibba HOM05D000639 ORTHO05D007519 3.9e-33 145.2 149 52.3
Ciclev10000650m.g Citrus clementina HOM05D000639 ORTHO05D007519 6.7e-33 144.4 145 53.1
QL04p020506 Quercus lobata HOM05D000639 ORTHO05D007519 2.5e-32 142.5 66 98.5
Pp3c22_9680 Physcomitrium patens HOM05D000639 ORTHO05D007519 1.4e-30 136.7 147 48.3
Mapoly0032s0165 Marchantia polymorpha HOM05D000639 ORTHO05D007519 2.0e-29 132.9 157 47.8
CBR_g3764 Chara braunii HOM05D000639 ORTHO05D007519 3.4e-29 132.1 141 51.1
SMO111G0077 Selaginella moellendorffii HOM05D000639 ORTHO05D007519 2.2e-28 129.4 146 47.9
BcaB04g18688 Brassica carinata HOM05D000639 ORTHO05D007519 2.1e-26 122.9 111 55.9
ATR0559G017 Amborella trichopoda HOM05D000639 ORTHO05D007519 3.4e-21 105.5 82 61.0
MCO05G494 Micromonas commoda HOM05D000639 ORTHO05D007519 8.0e-18 94.4 108 44.4
Cre16.g685900 Chlamydomonas reinhardtii HOM05D000639 ORTHO05D007519 6.5e-12 74.7 146 38.4
PRCOL_00006047 Prasinoderma coloniale HOM05D000639 ORTHO05D007519 4.0e-09 65.5 146 33.6


User provided reference genes

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