Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 2.6e-68 261.9 132 100.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.4e-53 212.2 132 77.3
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 9.0e-53 210.3 132 76.5
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 1.2e-52 209.9 132 75.8
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.5e-52 209.5 132 76.5
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 1.5e-52 209.5 132 78.8
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.0e-52 209.1 131 76.3
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 2.0e-52 209.1 131 75.6
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.6e-52 208.8 131 74.8
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 2.6e-52 208.8 132 76.5
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 3.4e-52 208.4 132 75.8
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.5e-52 208.0 132 75.8
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 4.5e-52 208.0 132 78.0
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 5.8e-52 207.6 132 76.5
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 5.8e-52 207.6 132 75.8
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 7.6e-52 207.2 132 77.3
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 9.9e-52 206.8 132 75.8
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 1.7e-51 206.1 132 75.8
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 1.7e-51 206.1 132 75.0
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.2e-51 205.7 132 75.8
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 3.8e-51 204.9 132 74.2
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 4.9e-51 204.5 132 75.8
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 8.4e-51 203.8 132 75.0
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.1e-50 203.4 132 74.2
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 1.9e-50 202.6 132 74.2
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.4e-50 202.2 132 73.5
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.4e-50 202.2 132 73.5
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 3.2e-50 201.8 132 74.2
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 5.5e-50 201.1 128 75.0
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 7.1e-50 200.7 140 70.7
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 9.3e-50 200.3 131 74.8
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 9.3e-50 200.3 132 72.0
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 9.3e-50 200.3 132 72.0
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.6e-49 199.5 127 78.0
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.6e-49 199.5 132 72.7
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 2.1e-49 199.1 132 72.0
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 3.5e-49 198.4 132 72.7
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 6.0e-49 197.6 131 71.8
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 7.9e-49 197.2 132 75.0
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.9e-49 197.2 132 72.0
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.9e-49 197.2 132 72.0
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 71.0
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.8e-48 196.1 132 71.2
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 132 72.0
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 2.3e-48 195.7 132 72.0
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 3.9e-48 194.9 131 73.3
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 5.1e-48 194.5 131 73.3
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-47 193.4 124 73.4
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-47 193.4 124 73.4
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 74.0
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.9e-47 192.6 132 71.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.9e-47 192.6 131 69.5
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 132 71.2
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.3e-47 191.4 132 69.7
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 1.3e-46 189.9 125 70.4
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.8e-46 188.7 124 72.6
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 3.7e-46 188.3 123 72.4
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 3.7e-46 188.3 132 68.9
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.4e-45 186.4 131 67.2
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 2.4e-45 185.7 130 71.5
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 4.0e-45 184.9 124 70.2
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 5.3e-45 184.5 124 71.8
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 5.3e-45 184.5 129 71.3
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.2e-44 183.3 132 66.7
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.5e-44 183.0 124 72.6
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.5e-44 183.0 127 69.3
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.5e-44 183.0 131 67.9
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 125 72.0
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 3.4e-44 181.8 130 67.7
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 4.5e-44 181.4 130 67.7
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.5e-44 181.4 130 67.7
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 4.5e-44 181.4 130 67.7
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 4.5e-44 181.4 130 67.7
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 7.6e-44 180.6 130 67.7
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.0e-43 180.3 130 66.9
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.0e-43 180.3 130 68.5
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.0e-43 180.3 130 67.7
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.7e-43 179.5 130 66.9
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 2.9e-43 178.7 128 65.6
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.9e-43 178.7 127 65.4
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 3.8e-43 178.3 131 64.9
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 4.9e-43 177.9 127 65.4
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 6.5e-43 177.6 130 66.2
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 6.5e-43 177.6 127 66.9
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 8.4e-43 177.2 127 64.6
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.1e-42 176.8 127 66.9
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.4e-42 176.4 127 66.9
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.4e-42 176.4 131 64.9
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.9e-42 176.0 127 65.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 3.2e-42 175.3 132 65.9
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 5.5e-42 174.5 127 65.4
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 5.5e-42 174.5 131 64.9
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 7.1e-42 174.1 139 63.3
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 7.1e-42 174.1 132 63.6
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 9.3e-42 173.7 131 64.9
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.2e-41 173.3 140 62.9
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 1.6e-41 172.9 127 63.0
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 2.1e-41 172.6 139 61.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.7e-41 172.2 143 61.5
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 3.5e-41 171.8 126 66.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 4.6e-41 171.4 132 62.1
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 6.0e-41 171.0 139 61.2
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 7.9e-41 170.6 138 61.6
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 7.9e-41 170.6 138 61.6
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.8e-40 169.5 133 61.7
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 6.7e-40 167.5 132 60.6
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.1e-39 166.8 157 54.1
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.1e-39 166.8 171 52.0
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.1e-37 160.2 132 60.6
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 6.5e-35 151.0 132 58.3
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.2e-34 148.7 131 58.8
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 9.3e-34 147.1 129 55.0
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 1.2e-33 146.7 94 73.4
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 7.9e-33 144.1 106 67.9
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.5e-31 139.8 126 61.9
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 3.3e-31 138.7 126 56.3
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.2e-30 136.0 128 51.6
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 3.1e-29 132.1 132 50.8
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 4.1e-29 131.7 128 50.8
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.4e-26 123.2 93 62.4
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.6e-23 112.5 78 70.5
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.6e-23 112.5 72 77.8
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.7e-23 111.3 78 67.9
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.8e-22 109.0 75 70.7
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.7e-22 108.6 71 71.8
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.2e-22 107.5 61 83.6
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.2e-22 107.5 61 83.6
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.5e-20 103.2 71 70.4
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.0e-20 102.8 71 67.6
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 4.5e-20 101.7 62 77.4
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.3e-19 100.1 72 66.7
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 2.2e-19 99.4 64 73.4
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.8e-19 98.6 61 73.8
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 4.2e-18 95.1 118 39.0
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 4.7e-17 91.7 70 61.4
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.8e-16 89.7 72 56.9
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.0e-16 89.0 77 53.2
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 3.0e-16 89.0 77 59.7
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 5.7e-15 84.7 63 63.5
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 7.0e-13 77.8 53 67.9
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 7.7e-12 74.3 77 49.4
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.9e-11 72.4 56 58.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.9e-11 72.4 78 44.9
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 1.5e-10 70.1 116 33.6
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 1.8e-08 63.2 51 54.9
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 7.5e-07 57.8 112 30.4
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 3.7e-06 55.5 90 27.8


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