Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.4e-145 519.6 272 100.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.2e-59 234.2 282 57.8
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.6e-59 232.3 295 54.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.0e-55 219.2 290 52.1
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 8.9e-55 218.0 290 51.4
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.7e-50 203.8 264 53.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 5.0e-50 202.2 297 47.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 9.5e-49 198.0 253 48.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-45 187.6 278 50.4
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.1e-44 182.6 274 46.4
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 5.4e-44 182.2 259 50.2
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 7.1e-44 181.8 273 47.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 7.1e-44 181.8 278 48.9
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 9.2e-44 181.4 270 46.3
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.1e-43 180.3 274 50.7
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 7.8e-43 178.3 270 45.6
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.3e-42 177.6 270 49.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.7e-42 177.2 269 46.8
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.9e-42 176.0 265 47.2
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.1e-42 175.6 275 50.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 6.6e-42 175.3 273 46.9
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 8.6e-42 174.9 277 48.4
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.6e-42 174.9 277 48.4
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 8.6e-42 174.9 268 45.9
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.5e-41 174.1 279 45.9
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.5e-41 174.1 269 46.5
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.9e-41 173.7 264 45.8
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-40 170.6 260 50.4
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.2e-40 168.7 253 47.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 6.2e-40 168.7 243 48.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.1e-39 167.9 272 47.1
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.1e-39 167.9 269 45.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.3e-39 166.8 264 46.6
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.4e-38 162.5 263 46.0
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 8.4e-37 158.3 255 47.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.4e-36 157.5 273 46.5
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.9e-36 157.1 264 43.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.2e-36 156.4 269 43.1
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.6e-35 154.1 281 43.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.7e-35 153.3 255 45.9
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.7e-35 153.3 270 43.3
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.5e-35 152.9 274 44.2
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.3e-34 151.0 251 49.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.3e-34 151.0 259 44.8
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.7e-34 150.6 293 42.0
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 1.7e-34 150.6 252 47.2
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.3e-34 150.2 301 43.5
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.0e-34 149.8 254 46.5
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 6.6e-34 148.7 249 45.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 6.6e-34 148.7 246 46.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.9e-33 147.1 249 43.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.9e-33 147.1 258 42.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.3e-33 146.4 250 44.8
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.3e-33 146.0 220 49.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.2e-32 144.4 250 42.0
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.8e-32 143.3 254 44.9
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-31 141.0 243 45.7
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.8e-31 140.6 234 42.7
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.4e-31 140.2 260 44.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 3.8e-29 132.9 251 43.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 4.9e-29 132.5 271 38.4
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 6.4e-29 132.1 245 42.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 5.4e-28 129.0 256 41.8
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 9.3e-28 128.3 271 38.0
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.6e-27 127.5 242 39.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-27 127.1 239 41.0
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.7e-27 126.7 246 39.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.5e-27 126.3 276 39.5
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.6e-27 125.9 268 41.4
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.8e-27 125.2 268 39.2
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.7e-26 124.0 262 39.3
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-26 124.0 286 40.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.0e-26 123.2 153 51.6
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.6e-26 122.1 160 50.0
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 8.7e-26 121.7 214 44.4
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.3e-25 119.4 251 39.4
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 4.3e-25 119.4 252 39.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 7.3e-25 118.6 261 39.5
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 7.3e-25 118.6 245 39.6
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.3e-24 117.9 251 38.2
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-24 117.1 251 42.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.8e-24 116.7 255 40.4
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.8e-24 116.7 249 40.6
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.1e-24 115.2 251 42.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.4e-23 113.6 302 38.1
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 6.9e-23 112.1 253 40.7
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 6.9e-23 112.1 339 31.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 6.9e-23 112.1 217 40.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 9.0e-23 111.7 295 34.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.2e-22 111.3 280 38.9
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.6e-22 110.2 279 39.4
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 5.8e-22 109.0 253 40.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 7.6e-22 108.6 255 38.8
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 7.6e-22 108.6 272 39.0
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.3e-21 107.8 255 38.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.7e-21 107.5 253 37.5
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-21 107.5 261 39.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.2e-20 103.2 255 40.8
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 3.2e-20 103.2 205 38.0
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 4.2e-20 102.8 241 38.2
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 5.4e-20 102.4 252 35.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 2.7e-19 100.1 252 35.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 6.0e-19 99.0 254 39.0
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.3e-18 97.8 133 44.4
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.3e-17 92.8 246 39.8
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.3e-17 92.8 246 39.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.1e-16 90.5 204 37.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.6e-16 89.7 369 29.3
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 6.2e-16 89.0 216 39.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 8.1e-16 88.6 245 34.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.8e-15 87.4 138 41.3
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.2e-14 84.7 311 32.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 9.9e-14 81.6 174 42.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 5.6e-09 65.9 85 48.2
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 6.9e-07 58.9 55 61.8
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.0e-06 57.4 97 44.3
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 3.4e-06 56.6 106 40.6


User provided reference genes

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