Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 1.3e-249 865.9 448 100.0
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 2.9e-196 688.7 454 79.5
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 3.4e-176 622.1 457 71.8
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 3.8e-172 608.6 451 70.3
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.0e-169 600.5 426 72.1
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.3e-169 599.4 451 69.2
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 1.7e-167 593.2 450 70.9
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 2.2e-167 592.8 435 71.0
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.9e-167 592.4 409 74.6
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 2.4e-166 589.3 440 72.0
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 4.1e-166 588.6 437 69.8
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 5.4e-166 588.2 448 68.1
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.4e-166 588.2 448 68.1
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 6.0e-165 584.7 420 71.9
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 7.8e-165 584.3 448 67.6
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 7.8e-165 584.3 438 68.5
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 5.0e-164 581.6 448 67.9
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 3.6e-162 575.5 439 68.6
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.7e-162 575.1 447 66.9
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 4.7e-162 575.1 408 72.1
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 6.2e-162 574.7 450 66.7
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.1e-161 573.9 449 67.7
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 5.2e-161 571.6 449 67.3
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 8.9e-161 570.9 449 67.3
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 5.8e-160 568.2 436 68.3
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 9.8e-160 567.4 402 71.9
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.6e-157 560.1 399 72.2
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.3e-156 557.0 408 70.6
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.3e-156 556.2 449 65.9
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 3.0e-156 555.8 402 70.9
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 3.9e-156 555.4 410 70.5
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 8.6e-156 554.3 381 71.9
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 3.3e-155 552.4 396 69.4
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.2e-154 550.4 415 68.4
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 3.6e-154 548.9 445 65.6
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 3.6e-154 548.9 401 70.1
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 5.2e-153 545.0 437 68.2
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 8.9e-153 544.3 427 66.0
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 7.5e-152 541.2 413 68.3
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.3e-151 540.4 419 67.8
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 3.7e-151 538.9 452 65.3
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 6.4e-151 538.1 374 71.1
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 3.2e-150 535.8 476 62.8
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 3.2e-150 535.8 413 67.1
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 9.2e-150 534.3 421 65.8
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.3e-148 530.4 414 65.5
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 3.0e-148 529.3 405 66.2
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.5e-147 526.9 409 67.0
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.9e-147 526.6 415 64.8
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 9.5e-147 524.2 401 66.3
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.4e-145 520.4 416 64.7
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.7e-143 513.5 418 64.6
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 4.9e-143 511.9 437 61.8
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 4.2e-142 508.8 401 65.3
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 5.4e-142 508.4 443 61.6
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.2e-141 507.3 419 63.2
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 3.5e-141 505.8 416 62.7
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 1.3e-140 503.8 382 68.3
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.7e-140 503.4 388 67.3
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 4.3e-139 498.8 374 66.8
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.3e-139 498.0 381 68.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 9.6e-139 497.7 437 61.1
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 2.1e-138 496.5 406 64.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 8.1e-138 494.6 347 70.6
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 4.4e-136 488.8 443 61.9
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.3e-135 487.3 394 66.5
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.4e-134 483.8 412 60.9
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.3e-130 470.7 430 58.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.5e-128 463.8 428 59.6
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 5.4e-126 455.3 351 66.4
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 7.1e-126 454.9 470 54.9
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.8e-124 450.3 374 62.3
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 5.1e-124 448.7 373 61.9
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 1.7e-119 433.7 454 53.3
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 2.5e-115 419.9 383 58.2
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 4.2e-110 402.5 287 69.3
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 4.6e-109 399.1 308 64.0
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 9.7e-107 391.3 275 73.1
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 8.2e-106 388.3 311 68.5
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.1e-101 373.6 390 52.1
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 7.4e-91 338.6 260 68.1
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 6.3e-74 282.3 255 59.2
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 4.0e-68 263.1 412 39.6
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 7.5e-67 258.8 401 40.1
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.6e-64 251.1 407 36.9
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 4.7e-61 239.6 211 59.7
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 3.5e-56 223.4 167 68.9
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 7.8e-56 222.2 214 55.6
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.1e-41 175.3 156 60.3
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.5e-38 164.9 154 57.8
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 5.2e-36 156.4 116 65.5
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 2.4e-17 94.4 78 57.7
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 2.4e-12 77.8 81 51.9
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 4.0e-12 77.0 257 27.6
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 3.4e-11 73.9 49 73.5
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 2.9e-10 70.9 72 51.4
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 6.4e-10 69.7 56 69.6
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.1e-09 68.9 60 56.7
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 3.5e-08 63.9 54 57.4
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 8.7e-07 59.3 120 35.0
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.1e-06 58.9 424 24.8
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.5e-06 57.8 415 22.7
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 4.3e-06 57.0 78 43.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.6e-06 56.6 284 25.0
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.6e-06 56.6 285 24.9
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 7.4e-06 56.2 285 24.6
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 9.6e-06 55.8 284 24.3
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 9.6e-06 55.8 285 24.6
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.6e-06 55.8 285 24.6


User provided reference genes

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