Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 1.7e-285 986.1 866 100.0
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 2.3e-152 543.9 402 70.6
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 4.2e-151 539.7 402 70.4
QL04p017651 Quercus lobata HOM05D008040 ORTHO05D010075 2.0e-47 195.3 255 46.3
QL04p017717 Quercus lobata HOM05D000034 ORTHO05D000037 1.0e-35 156.4 87 89.7
QL02p070172 Quercus lobata HOM05D000707 ORTHO05D004608 4.7e-25 120.9 71 85.9
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 2.0e-23 115.5 390 24.9
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 3.7e-22 111.3 410 24.9
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 1.9e-21 109.0 396 23.2
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 9.2e-21 106.7 384 25.3
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 2.0e-20 105.5 385 26.5
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 7.3e-18 97.1 357 22.7
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 7.3e-18 97.1 407 26.3
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.8e-17 95.1 436 25.2
QL12p036033 Quercus lobata HOM05D001694 ORTHO05D000248 1.1e-16 93.2 42 97.6
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.8e-16 92.4 390 25.6
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 3.1e-16 91.7 409 24.4
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.5e-15 89.4 454 24.2
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.0e-15 89.0 402 24.4
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.6e-15 88.6 187 36.9
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 2.6e-15 88.6 193 30.6
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.4e-15 88.2 390 23.6
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 4.4e-15 87.8 403 24.6
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 2.2e-14 85.5 374 23.5
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 8.3e-14 83.6 287 27.9
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.4e-13 82.8 183 34.4
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.2e-13 81.6 201 31.3
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.2e-13 81.6 185 35.1
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.1e-13 81.3 185 35.1
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 7.0e-13 80.5 141 40.4
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 1.6e-12 79.3 409 23.0
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.7e-12 78.6 191 34.0
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 1.3e-11 76.3 151 33.1
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-11 76.3 65 60.0
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 1.7e-11 75.9 404 22.5
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.0e-11 75.1 407 24.8
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 6.6e-11 73.9 382 22.0
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.5e-10 72.8 407 24.3
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 2.5e-10 72.0 148 35.8
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 5.6e-10 70.9 140 35.7
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 8.1e-09 67.0 162 30.2
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 1.1e-08 66.6 149 26.8
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 1.4e-08 66.2 132 31.1
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 2.3e-08 65.5 139 32.4
CSS0037447 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 4.0e-08 64.7 146 32.9
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 4.0e-08 64.7 148 30.4
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 8.9e-08 63.5 144 32.6
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 1.2e-07 63.2 379 24.0
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 1.5e-07 62.8 148 30.4
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.0e-07 62.4 145 34.5
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.6e-07 62.0 106 34.0
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 3.4e-07 61.6 106 34.0
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.4e-07 61.6 106 34.0
FAN28G1672 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.4e-07 61.6 105 33.3
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 5.8e-07 60.8 142 31.7
CSS0008769 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.9e-07 60.1 144 29.9
CSS0011530 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.9e-07 60.1 144 29.9
Rhsim11G0097300 Rhododendron simsii HOM05D061936 ORTHO05D010075 1.3e-06 59.7 146 34.2
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.2e-06 58.9 106 34.0
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 2.2e-06 58.9 145 32.4
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 6.4e-06 57.4 90 32.2
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 6.4e-06 57.4 150 30.7
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 6.4e-06 57.4 310 25.8
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 8.3e-06 57.0 363 24.8


User provided reference genes

Program Settings