Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p017122 Quercus lobata HOM05D000050 ORTHO05D337929 6.2e-111 404.1 194 100.0
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 1.2e-16 90.9 47 91.5
Zm00001eb161530 Zea mays HOM05D000050 ORTHO05D009634 1.7e-12 77.0 43 79.1
QL02p085445 Quercus lobata HOM05D000050 ORTHO05D009634 3.9e-12 75.9 41 82.9
Os01g0605300 Oryza sativa ssp. japonica HOM05D000050 ORTHO05D009634 8.7e-12 74.7 41 80.5
Cfa003259 Carpinus fangiana HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
Ciclev10007939m.g Citrus clementina HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
Haze_25713 Corylus avellana HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
Manes.16G116300 Manihot esculenta HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
Prupe.7G230900 Prunus persica HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
TWI34G0721 Tripterygium wilfordii HOM05D000050 ORTHO05D009634 1.1e-11 74.3 41 80.5
CiPaw.04G164200 Carya illinoinensis HOM05D000050 ORTHO05D009634 1.9e-11 73.6 41 80.5
Eucgr.C03846 Eucalyptus grandis HOM05D000050 ORTHO05D009634 1.9e-11 73.6 41 80.5
MBI04_g19385_MAGBIO Magnolia biondii HOM05D000050 ORTHO05D009634 1.9e-11 73.6 35 91.4
Peaxi162Scf00560g00015 Petunia axillaris HOM05D000050 ORTHO05D009634 1.9e-11 73.6 41 80.5
Atru.chr7.1348 Acer truncatum HOM05D000050 ORTHO05D009634 2.5e-11 73.2 41 80.5
Nn2g11753 Nelumbo nucifera HOM05D000050 ORTHO05D009634 2.5e-11 73.2 41 78.0
Nitab4.5_0003945g0130 Nicotiana tabacum HOM05D000050 ORTHO05D009634 2.5e-11 73.2 42 78.6
Potri.006G157600 Populus trichocarpa HOM05D000050 ORTHO05D009634 2.5e-11 73.2 35 91.4
Sabra06G0124400 Salix brachista HOM05D000050 ORTHO05D009634 2.5e-11 73.2 35 91.4
PGSC0003DMG400022096 Solanum tuberosum HOM05D000050 ORTHO05D009634 3.3e-11 72.8 41 80.5
Nitab4.5_0008230g0020 Nicotiana tabacum HOM05D000050 ORTHO05D009634 4.3e-11 72.4 35 91.4
PSO063G5214 Papaver somniferum HOM05D000050 ORTHO05D009634 4.3e-11 72.4 35 88.6
PSO782G0124 Papaver somniferum HOM05D000050 ORTHO05D009634 4.3e-11 72.4 35 88.6
Solyc07g024070.3 Solanum lycopersicum HOM05D000050 ORTHO05D009634 4.3e-11 72.4 41 78.0
HPP92_009704 Vanilla planifolia HOM05D000050 ORTHO05D009634 4.3e-11 72.4 37 83.8
GSVIVG01015392001 Vitis vinifera HOM05D000050 ORTHO05D009634 4.3e-11 72.4 41 78.0
Aqoxy7G01683 Aquilegia oxysepala HOM05D000050 ORTHO05D009634 5.6e-11 72.0 35 88.6
Cpa.g.sc23.110 Carica papaya HOM05D000050 ORTHO05D009634 5.6e-11 72.0 41 78.0
CDE09G1380 Ceratophyllum demersum HOM05D000050 ORTHO05D009634 5.6e-11 72.0 41 78.0
Haze_16848 Corylus avellana HOM05D000425 ORTHO05D000373 5.6e-11 72.0 33 90.9
Hma1.2p1_0018F.1_g013490 Hydrangea macrophylla HOM05D000050 ORTHO05D009634 5.6e-11 72.0 41 78.0
RcHm_v2.0_Chr2g0090471 Rosa chinensis HOM05D000050 ORTHO05D009634 5.6e-11 72.0 41 78.0
SGA_v2.0_scaffold30G12372 Striga asiatica HOM05D000050 ORTHO05D009634 5.6e-11 72.0 41 78.0
TAR626G0695 Trochodendron aralioides HOM05D000050 ORTHO05D009634 7.3e-11 71.6 41 75.6
Cc06_g09640 Coffea canephora HOM05D000050 ORTHO05D009634 9.6e-11 71.2 35 88.6
PGR102G1095 Punica granatum HOM05D000050 ORTHO05D009634 9.6e-11 71.2 41 75.6
AT3G24515 Arabidopsis thaliana HOM05D000050 ORTHO05D009634 1.3e-10 70.9 41 75.6
BcaB03g14580 Brassica carinata HOM05D000050 ORTHO05D009634 1.3e-10 70.9 41 75.6
Thhalv10002966m.g Eutrema salsugineum HOM05D000050 ORTHO05D009634 1.3e-10 70.9 41 75.6
FvH4_1g04830 Fragaria vesca HOM05D000050 ORTHO05D009634 1.3e-10 70.9 35 88.6
FAN19G0481 Fragaria x ananassa HOM05D000050 ORTHO05D009634 1.3e-10 70.9 35 88.6
FvH4_4g32890 Fragaria vesca HOM05D000050 ORTHO05D009634 1.6e-10 70.5 36 86.1
Lj6A643T69 Lonicera japonica HOM05D000050 ORTHO05D009634 1.6e-10 70.5 41 75.6
CANSAT56G3096 Cannabis sativa HOM05D000050 ORTHO05D009634 2.1e-10 70.1 41 75.6
CARHR100640 Cardamine hirsuta HOM05D000050 ORTHO05D009634 2.1e-10 70.1 41 75.6
Sopen07g012480 Solanum pennellii HOM05D000050 ORTHO05D009634 2.1e-10 70.1 41 75.6
AL3G40050 Arabidopsis lyrata HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
DCAR_010450 Daucus carota HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Dinv04203 Davidia involucrata HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Dinv36630 Davidia involucrata HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Gohir.A06G062500 Gossypium hirsutum HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Gohir.D06G060800 Gossypium hirsutum HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Gorai.010G070800 Gossypium raimondii HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Lsat_1_v5_gn_5_103420 Lactuca sativa HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
Oeu028021.1 Olea europaea HOM05D000050 ORTHO05D009634 2.8e-10 69.7 41 75.6
SEGI_37831 Sequoiadendron giganteum HOM05D000050 ORTHO05D009634 3.6e-10 69.3 37 81.1
Actinidia09417 Actinidia chinensis HOM05D000050 ORTHO05D009634 4.8e-10 68.9 41 75.6
ATR0751G079 Amborella trichopoda HOM05D000050 ORTHO05D009634 4.8e-10 68.9 35 82.9
Duzib168G1999 Durio zibethinus HOM05D000050 ORTHO05D009634 4.8e-10 68.9 41 75.6
ECA234G3317 Erigeron canadensis HOM05D000050 ORTHO05D009634 4.8e-10 68.9 41 75.6
MD14G1109900 Malus domestica HOM05D000050 ORTHO05D009634 4.8e-10 68.9 40 77.5
HanXRQChr12g0355511 Helianthus annuus HOM05D000050 ORTHO05D009634 6.2e-10 68.6 41 75.6
MD15G1186000 Malus domestica HOM05D000050 ORTHO05D009634 6.2e-10 68.6 41 75.6
Thecc.09G110700 Theobroma cacao HOM05D000050 ORTHO05D009634 6.2e-10 68.6 41 75.6
MSTRG.6007 Avicennia marina HOM05D000050 ORTHO05D009634 8.1e-10 68.2 41 75.6
CSS0024008 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D009634 8.1e-10 68.2 41 75.6
CSS0044055 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D009634 8.1e-10 68.2 41 75.6
THA.LOC104821637 Tarenaya hassleriana HOM05D000050 ORTHO05D009634 8.1e-10 68.2 35 85.7
BcaC01g03305 Brassica carinata HOM05D000050 ORTHO05D009634 1.1e-09 67.8 41 73.2
C03p53970 Brassica napus HOM05D000050 ORTHO05D009634 1.1e-09 67.8 41 73.2
BolC3t17653H Brassica oleracea HOM05D000050 ORTHO05D009634 1.1e-09 67.8 41 73.2
A03p43750 Brassica napus HOM05D000050 ORTHO05D009634 2.4e-09 66.6 35 82.9
BraA03t13510Z Brassica rapa HOM05D000050 ORTHO05D009634 2.4e-09 66.6 35 82.9
Carub.0003s2490 Capsella rubella HOM05D000050 ORTHO05D009634 2.4e-09 66.6 41 73.2
Mapoly0103s0054 Marchantia polymorpha HOM05D000050 ORTHO05D255443 4.0e-09 65.9 35 80.0
FAN17G2043 Fragaria x ananassa HOM05D000050 ORTHO05D009634 6.9e-09 65.1 35 82.9
Pp3c23_22220 Physcomitrium patens HOM05D000050 ORTHO05D009634 9.0e-09 64.7 43 60.5
FAN26G1381 Fragaria x ananassa HOM05D000050 ORTHO05D009634 7.6e-08 61.6 31 87.1
CSS0038870 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D010020 9.9e-08 61.2 99 35.4
RcHm_v2.0_Chr7g0234881 Rosa chinensis HOM05D000650 ORTHO05D010020 9.9e-08 61.2 65 44.6
TAR625G0834 Trochodendron aralioides HOM05D000650 ORTHO05D000735 9.9e-08 61.2 53 56.6
MD08G1128600 Malus domestica HOM05D000050 ORTHO05D009634 1.3e-07 60.8 34 82.4
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 1.3e-07 60.8 53 49.1
CANSAT25G0331 Cannabis sativa HOM05D000650 ORTHO05D010020 1.7e-07 60.5 56 50.0
Haze_01807 Corylus avellana HOM05D000650 ORTHO05D010020 1.7e-07 60.5 63 49.2
TWI56G0415 Tripterygium wilfordii HOM05D000650 ORTHO05D010020 1.7e-07 60.5 49 49.0
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 1.7e-07 60.5 61 50.8
TAR625G0371 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.7e-07 60.5 61 50.8
FAN23G0271 Fragaria x ananassa HOM05D000050 ORTHO05D009634 2.9e-07 59.7 36 80.6
SMO118G0182 Selaginella moellendorffii HOM05D000050 ORTHO05D000380 2.9e-07 59.7 34 70.6
COL.COLO4_35274 Corchorus olitorius HOM05D000650 ORTHO05D010020 4.9e-07 58.9 64 40.6
Prupe.1G535200 Prunus persica HOM05D000650 ORTHO05D010020 4.9e-07 58.9 52 50.0
Potri.005G152100 Populus trichocarpa HOM05D000650 ORTHO05D010020 8.4e-07 58.2 61 45.9
TAR381G0504 Trochodendron aralioides HOM05D000650 ORTHO05D000735 8.4e-07 58.2 62 46.8
EL10Ac6g13183 Beta vulgaris HOM05D000650 ORTHO05D000735 1.1e-06 57.8 69 43.5
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 1.1e-06 57.8 61 50.8
CANSAT78G1891 Cannabis sativa HOM05D000650 ORTHO05D000735 1.4e-06 57.4 62 46.8
Carub.0001s3433 Capsella rubella HOM05D000050 ORTHO05D009634 2.4e-06 56.6 33 78.8
Dinv08988 Davidia involucrata HOM05D000650 ORTHO05D000735 2.4e-06 56.6 56 50.0
Gohir.A06G031000 Gossypium hirsutum HOM05D000650 ORTHO05D010020 3.2e-06 56.2 64 39.1
HPP92_016913 Vanilla planifolia HOM05D000650 ORTHO05D000735 3.2e-06 56.2 54 48.1
Dinv08989 Davidia involucrata HOM05D000650 ORTHO05D000735 4.2e-06 55.8 68 41.2
ECA246G1204 Erigeron canadensis HOM05D000650 ORTHO05D000735 4.2e-06 55.8 60 45.0
HanXRQChr17g0545471 Helianthus annuus HOM05D000650 ORTHO05D000735 4.2e-06 55.8 60 45.0
Rhsim12G0157200 Rhododendron simsii HOM05D000650 ORTHO05D000735 4.2e-06 55.8 69 42.0
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 4.2e-06 55.8 58 46.6
BolC3t18690H Brassica oleracea HOM05D000650 ORTHO05D000735 5.4e-06 55.5 62 46.8
BolSC101t60213H Brassica oleracea HOM05D000650 ORTHO05D000735 5.4e-06 55.5 62 46.8
COL.COLO4_22886 Corchorus olitorius HOM05D000650 ORTHO05D000735 5.4e-06 55.5 69 40.6
Thecc.02G127100 Theobroma cacao HOM05D000650 ORTHO05D007302 5.4e-06 55.5 49 49.0
GSVIVG01009203001 Vitis vinifera HOM05D000650 ORTHO05D000735 5.4e-06 55.5 75 44.0
Eucgr.B03426 Eucalyptus grandis HOM05D000650 ORTHO05D000735 7.1e-06 55.1 62 45.2
PSO017G1572 Papaver somniferum HOM05D000650 ORTHO05D000735 7.1e-06 55.1 60 46.7
PSO478G0327 Papaver somniferum HOM05D000650 ORTHO05D000735 7.1e-06 55.1 60 46.7
TAR625G0784 Trochodendron aralioides HOM05D000650 ORTHO05D010020 7.1e-06 55.1 50 50.0
AUR62028802 Chenopodium quinoa HOM05D000650 ORTHO05D000735 9.3e-06 54.7 57 49.1
Ca_21830_v3 Cicer arietinum L. HOM05D000650 ORTHO05D000735 9.3e-06 54.7 69 44.9
Gohir.D06G030200 Gossypium hirsutum HOM05D000650 ORTHO05D010020 9.3e-06 54.7 59 40.7
Gorai.010G033200 Gossypium raimondii HOM05D000650 ORTHO05D010020 9.3e-06 54.7 64 37.5
Nn1g05637 Nelumbo nucifera HOM05D000650 ORTHO05D010020 9.3e-06 54.7 49 51.0
Nn4g23125 Nelumbo nucifera HOM05D000650 ORTHO05D000735 9.3e-06 54.7 69 42.0


User provided reference genes

Program Settings