Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p016767 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-94 347.4 163 100.0
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-37 160.6 273 36.3
QL04p088136 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-29 132.1 239 33.5
QL02p022361 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-23 113.2 269 27.5
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 4.5e-22 108.6 275 28.0
QL05p083592 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-21 105.9 93 55.9
QL05p083724 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-21 105.9 93 55.9
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-21 105.5 269 26.0
QL06p031073 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-20 100.9 238 28.6
QL03p025076 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-19 100.1 234 28.6
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-19 99.8 79 54.4
QL05p067574 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-19 98.2 61 72.1
QL12p002221 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-18 96.3 66 62.1
QL02p087577 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-17 94.0 61 65.6
QL08p015792 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-17 91.3 70 58.6
QL06p022312 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-16 89.4 71 54.9
QL05p002322 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-16 88.2 79 50.6
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-14 82.0 79 45.6
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-13 79.7 269 23.8
QL01p046318 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-13 77.8 82 43.9
Atru.chr1.2023 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-12 77.0 155 28.4
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-12 76.6 81 40.7
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-12 75.5 261 23.4
QL09p031928 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-12 75.5 85 41.2
QL12p030327 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-12 74.7 72 47.2
QL06p019542 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-11 72.0 85 38.8
QL04p009727 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-10 70.9 82 40.2
QL07p020237 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-10 70.5 103 36.9
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-10 70.1 51 58.8
QL93p0381_0054 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-10 69.7 82 39.0
QL05p052024 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-10 68.9 53 54.7
QL11p049760 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-10 68.9 56 51.8
QL02p052601 Quercus lobata HOM05D000003 ORTHO05D000004 6.8e-10 68.2 80 36.2
CiPaw.15G166300 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.9e-10 67.8 166 26.5
QL02p088449 Quercus lobata HOM05D000003 ORTHO05D000004 8.9e-10 67.8 84 41.7
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 8.9e-10 67.8 80 36.2
QL05p008349 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-09 66.6 53 52.8
QL07p019188 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-09 66.2 80 35.0
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-09 66.2 54 48.1
QL05p074806 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-09 65.9 87 39.1
QL09p033712 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-09 64.7 59 47.5
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.8e-09 64.3 129 31.0
QL03p071359 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-09 64.3 53 52.8
QL03p014658 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-08 63.5 82 34.1
PSO339G4890 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 157 26.1
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-08 62.4 85 32.9
TPR.G7198 Trifolium pratense HOM05D000003 ORTHO05D000004 3.7e-08 62.4 95 35.8
BraA08t32258Z Brassica rapa HOM05D000003 ORTHO05D001498 4.9e-08 62.0 133 27.8
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.9e-08 62.0 85 35.3
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 4.9e-08 62.0 168 23.8
QL08p017448 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-08 62.0 50 50.0
QL03p053290 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-08 61.6 54 48.1
TPR.G37077 Trifolium pratense HOM05D000003 ORTHO05D000004 6.4e-08 61.6 102 38.2
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-07 60.5 230 23.5
TPR.G17522 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-07 60.5 85 35.3
BolC8t52720H Brassica oleracea HOM05D000003 ORTHO05D001498 1.9e-07 60.1 164 23.8
QL05p064920 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 60.1 53 45.3
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-07 59.7 84 35.7
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-07 59.7 84 35.7
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 2.4e-07 59.7 86 38.4
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-07 59.7 155 26.5
QL04p009622 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-07 59.7 54 46.3
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-07 59.3 83 33.7
QL03p006515 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-07 59.3 54 48.1
QL08p030274 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-07 58.5 79 36.7
Rhsim01G0076000 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.4e-07 58.5 82 40.2
Psat2g073840 Pisum sativum HOM05D000003 ORTHO05D000004 7.1e-07 58.2 142 24.6
QL09p036209 Quercus lobata HOM05D020009 ORTHO05D000004 7.1e-07 58.2 50 52.0
RcHm_v2.0_Chr1g0344541 Rosa chinensis HOM05D000003 ORTHO05D000004 7.1e-07 58.2 83 32.5
RcHm_v2.0_Chr5g0040851 Rosa chinensis HOM05D000003 ORTHO05D000004 7.1e-07 58.2 83 32.5
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 9.2e-07 57.8 67 40.3
QL03p029989 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 57.4 81 37.0
QL11p030351 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 57.4 169 28.4
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-06 57.0 87 32.2
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-06 57.0 87 32.2
CANSAT56G4406 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 56.6 84 36.9
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-06 56.2 87 32.2
CiPaw.15G035300 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.5e-06 55.8 85 31.8
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.5e-06 55.8 135 28.1
PSO832G1931 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 95 33.7
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 3.5e-06 55.8 79 35.4
QL10p062870 Quercus lobata HOM05D000003 ORTHO05D000004 3.5e-06 55.8 58 44.8
Atru.chr8.965 Acer truncatum HOM05D000003 ORTHO05D000167 4.6e-06 55.5 149 23.5
PSO478G4870 Papaver somniferum HOM05D000003 ORTHO05D006738 4.6e-06 55.5 92 33.7
QL04p002075 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-06 55.5 52 46.2
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 55.1 86 36.0
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 55.1 88 33.0
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-06 55.1 85 34.1
QL04p012310 Quercus lobata HOM05D000009 ORTHO05D000008 6.0e-06 55.1 86 34.9
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-06 55.1 85 32.9
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 7.8e-06 54.7 90 28.9
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.8e-06 54.7 83 39.8


User provided reference genes

Program Settings