Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p013371 Quercus lobata HOM05D000677 ORTHO05D024836 2.8e-67 258.5 127 100.0
QL04p012805 Quercus lobata HOM05D000677 ORTHO05D024836 1.4e-66 256.1 127 99.2
CiPaw.13G010400 Carya illinoinensis HOM05D000677 ORTHO05D000727 1.7e-40 169.5 121 71.1
QL04p013338 Quercus lobata HOM05D000677 ORTHO05D000727 2.8e-35 152.1 129 60.5
Dinv32056 Davidia involucrata HOM05D000677 ORTHO05D000727 5.5e-31 137.9 115 60.0
Cfa010854 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.0e-29 133.7 127 56.7
Atru.chr11.2500 Acer truncatum HOM05D000677 ORTHO05D000727 1.8e-29 132.9 123 58.5
Duzib128G0211 Durio zibethinus HOM05D000677 ORTHO05D000727 4.3e-28 128.3 103 63.1
Ciclev10033461m.g Citrus clementina HOM05D000677 ORTHO05D000727 9.6e-28 127.1 122 53.3
GSVIVG01000848001 Vitis vinifera HOM05D000677 ORTHO05D000727 9.6e-28 127.1 117 57.3
CSS0009873 Camellia sinensis var. sinensis HOM05D000677 ORTHO05D000727 1.4e-26 123.2 122 54.1
QL04p012780 Quercus lobata HOM05D000677 ORTHO05D000727 1.4e-26 123.2 116 53.4
CiPaw.13G010300 Carya illinoinensis HOM05D000677 ORTHO05D000727 1.8e-26 122.9 123 50.4
Eucgr.J01196 Eucalyptus grandis HOM05D000677 ORTHO05D000727 4.0e-26 121.7 109 55.0
COL.COLO4_25836 Corchorus olitorius HOM05D000677 ORTHO05D000727 6.9e-26 120.9 119 55.5
Thecc.10G005500 Theobroma cacao HOM05D000677 ORTHO05D000727 9.0e-26 120.6 119 50.4
Potri.001G023400 Populus trichocarpa HOM05D000677 ORTHO05D000727 2.0e-25 119.4 108 60.2
Solyc01g068380.3 Solanum lycopersicum HOM05D000677 ORTHO05D000727 1.3e-24 116.7 120 55.0
Atru.chr11.2501 Acer truncatum HOM05D000677 ORTHO05D000727 2.9e-24 115.5 112 55.4
Eucgr.J01197 Eucalyptus grandis HOM05D000677 ORTHO05D000727 2.9e-24 115.5 99 55.6
PGSC0003DMG400017958 Solanum tuberosum HOM05D000677 ORTHO05D000727 3.8e-24 115.2 118 55.1
FAN01G1016 Fragaria x ananassa HOM05D000677 ORTHO05D000727 4.9e-24 114.8 119 49.6
Prupe.2G028600 Prunus persica HOM05D000677 ORTHO05D000727 4.9e-24 114.8 114 54.4
TAR369G0724 Trochodendron aralioides HOM05D000677 ORTHO05D000727 4.9e-24 114.8 110 52.7
FAN06G4392 Fragaria x ananassa HOM05D000677 ORTHO05D000727 8.4e-24 114.0 119 49.6
MBI13_g41711_MAGBIO Magnolia biondii HOM05D000677 ORTHO05D000727 8.4e-24 114.0 101 57.4
FvH4_7g02230 Fragaria vesca HOM05D000677 ORTHO05D000727 1.4e-23 113.2 119 49.6
Peaxi162Scf00309g00120 Petunia axillaris HOM05D000677 ORTHO05D000727 1.4e-23 113.2 120 50.0
Duzib106G0580 Durio zibethinus HOM05D000677 ORTHO05D000727 2.5e-23 112.5 100 57.0
PGR044G1200 Punica granatum HOM05D000677 ORTHO05D000727 2.5e-23 112.5 105 54.3
TWI38G2282 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 2.5e-23 112.5 119 51.3
MD07G1029700 Malus domestica HOM05D000677 ORTHO05D000727 4.2e-23 111.7 114 50.9
FAN03G0987 Fragaria x ananassa HOM05D000677 ORTHO05D000727 5.5e-23 111.3 119 48.7
RcHm_v2.0_Chr1g0319551 Rosa chinensis HOM05D000677 ORTHO05D000727 5.5e-23 111.3 119 49.6
Medtr4g037670 Medicago truncatula HOM05D000677 ORTHO05D000727 7.1e-23 110.9 120 49.2
Aqoxy2G00293 Aquilegia oxysepala HOM05D000677 ORTHO05D000727 1.2e-22 110.2 102 54.9
Sabra01G0017700 Salix brachista HOM05D000677 ORTHO05D000727 1.2e-22 110.2 119 53.8
Eucgr.J01199 Eucalyptus grandis HOM05D000677 ORTHO05D000727 2.1e-22 109.4 90 54.4
Phvul.011G014800 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 2.1e-22 109.4 120 49.2
Lj7A579T38 Lonicera japonica HOM05D000677 ORTHO05D000727 3.5e-22 108.6 80 60.0
DCAR_003235 Daucus carota HOM05D000063 ORTHO05D003101 6.0e-22 107.8 80 62.5
VMungo1127G2073 Vigna mungo HOM05D000677 ORTHO05D000727 7.9e-22 107.5 107 50.5
QL04p013403 Quercus lobata HOM05D000677 ORTHO05D000727 1.0e-21 107.1 124 47.6
Glyma.09G225000 Glycine max HOM05D000677 ORTHO05D000727 1.3e-21 106.7 127 46.5
Glyma.12G012000 Glycine max HOM05D000677 ORTHO05D000727 1.3e-21 106.7 120 48.3
HPP92_016886 Vanilla planifolia HOM05D000677 ORTHO05D000727 1.3e-21 106.7 80 58.8
ATR0721G131 Amborella trichopoda HOM05D000677 ORTHO05D000727 3.0e-21 105.5 105 51.4
Eucgr.J01195 Eucalyptus grandis HOM05D000677 ORTHO05D000727 3.9e-21 105.1 112 48.2
Gohir.D13G014001 Gossypium hirsutum HOM05D000677 ORTHO05D000727 1.1e-20 103.6 99 50.5
Gorai.013G015200 Gossypium raimondii HOM05D000677 ORTHO05D000727 1.1e-20 103.6 99 50.5
Nn7g36482 Nelumbo nucifera HOM05D000677 ORTHO05D000727 1.1e-20 103.6 85 56.5
PSO339G0815 Papaver somniferum HOM05D000677 ORTHO05D000727 1.1e-20 103.6 112 50.9
Cfa010853 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.5e-20 103.2 107 52.3
Gohir.A13G013000 Gossypium hirsutum HOM05D000677 ORTHO05D000727 1.5e-20 103.2 99 50.5
Lj3g0019403 Lotus japonicus HOM05D000677 ORTHO05D000727 1.9e-20 102.8 128 46.1
Cc02_g29510 Coffea canephora HOM05D000677 ORTHO05D000727 2.5e-20 102.4 118 50.0
Gohir.D13G014102 Gossypium hirsutum HOM05D000677 ORTHO05D024836 2.5e-20 102.4 108 50.9
Gorai.013G015300 Gossypium raimondii HOM05D000677 ORTHO05D024836 2.5e-20 102.4 108 50.9
CANSAT80G0361 Cannabis sativa HOM05D000677 ORTHO05D000727 4.3e-20 101.7 85 56.5
Potri.003G202200 Populus trichocarpa HOM05D000677 ORTHO05D000727 9.7e-20 100.5 118 49.2
DCAR_022357 Daucus carota HOM05D000677 ORTHO05D000727 1.3e-19 100.1 73 61.6
HanXRQChr01g0016411 Helianthus annuus HOM05D000677 ORTHO05D000727 2.2e-19 99.4 121 46.3
CANSAT80G2597 Cannabis sativa HOM05D000677 ORTHO05D000727 6.3e-19 97.8 86 55.8
PSO513G0192 Papaver somniferum HOM05D000677 ORTHO05D000727 6.3e-19 97.8 110 49.1
VMungo1127G2079 Vigna mungo HOM05D000677 ORTHO05D000727 6.3e-19 97.8 122 44.3
Psat0s3281g0040 Pisum sativum HOM05D000677 ORTHO05D000727 8.2e-19 97.4 115 46.1
HPP92_016885 Vanilla planifolia HOM05D000677 ORTHO05D000727 1.1e-18 97.1 108 47.2
HanXRQChr13g0403851 Helianthus annuus HOM05D000677 ORTHO05D000727 1.4e-18 96.7 121 46.3
Phvul.011G014900 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 1.8e-18 96.3 120 45.0
Sed0026976 Sechium edule HOM05D000677 ORTHO05D000727 1.8e-18 96.3 114 45.6
Migut.D00795 Erythranthe guttata HOM05D000677 ORTHO05D000727 2.4e-18 95.9 79 59.5
ECA248G1819 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.1e-18 95.5 79 51.9
TPR.G21748 Trifolium pratense HOM05D000677 ORTHO05D000727 6.9e-18 94.4 122 42.6
Psat2g118160 Pisum sativum HOM05D000677 ORTHO05D000727 9.0e-18 94.0 114 46.5
Lsat_1_v5_gn_1_98020 Lactuca sativa HOM05D000677 ORTHO05D000727 1.2e-17 93.6 114 42.1
Medtr1g052505 Medicago truncatula HOM05D000677 ORTHO05D000727 1.5e-17 93.2 73 54.8
Migut.D00794 Erythranthe guttata HOM05D000677 ORTHO05D000727 2.6e-17 92.4 79 55.7
Oeu006104.1 Olea europaea HOM05D000677 ORTHO05D000727 1.0e-16 90.5 90 47.8
SEGI_15600 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 1.3e-16 90.1 89 48.3
SEGI_19673 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 2.5e-15 85.9 89 46.1
SEGI_03563 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 3.2e-15 85.5 87 43.7
SGA_v2.0_scaffold158G37455 Striga asiatica HOM05D000677 ORTHO05D000727 3.2e-15 85.5 72 51.4
Cpa.g.c33608 Carica papaya HOM05D000677 ORTHO05D024836 7.2e-15 84.3 81 53.1
ClCG01G007620 Citrullus lanatus HOM05D000677 ORTHO05D000727 1.6e-14 83.2 116 44.0
Lalb_Chr03g0024231 Lupinus albus HOM05D000677 ORTHO05D000727 2.1e-14 82.8 87 47.1
MELO3C033949.2 Cucumis melo HOM05D000677 ORTHO05D000727 3.6e-14 82.0 116 40.5
Zm00001eb369470 Zea mays HOM05D000677 ORTHO05D000727 3.6e-14 82.0 80 48.8
Hund15709 Selenicereus undatus HOM05D000677 ORTHO05D000727 6.1e-14 81.3 114 42.1
arahy.Tifrunner.gnm1.ann1.J3JZ4F Arachis hypogaea HOM05D000677 ORTHO05D000727 1.0e-13 80.5 120 38.3
arahy.Tifrunner.gnm1.ann1.ZE4J6B Arachis hypogaea HOM05D000677 ORTHO05D000727 1.0e-13 80.5 92 45.7
Cfa010852 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.0e-13 80.5 74 54.1
Zm00001eb369460 Zea mays HOM05D000677 ORTHO05D000727 1.8e-13 79.7 79 50.6
TWI38G0884 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 3.0e-13 79.0 124 37.1
AUR62037237 Chenopodium quinoa HOM05D000677 ORTHO05D000727 3.9e-13 78.6 132 38.6
MELO3C033753.2 Cucumis melo HOM05D000677 ORTHO05D000727 6.7e-13 77.8 111 41.4
CsaV3_5G024650 Cucumis sativus L. HOM05D000677 ORTHO05D000727 8.8e-13 77.4 118 41.5
Sc10g0004250 Simmondsia chinensis HOM05D000677 ORTHO05D000727 1.1e-12 77.0 114 40.4
EL10Ac2g02866 Beta vulgaris HOM05D000677 ORTHO05D000727 1.5e-12 76.6 122 37.7
Mapoly0014s0160 Marchantia polymorpha HOM05D000677 ORTHO05D000727 1.9e-12 76.3 75 48.0
Os01g0800500 Oryza sativa ssp. japonica HOM05D000677 ORTHO05D000727 1.9e-12 76.3 72 54.2
unitig_62.g23944 Utricularia gibba HOM05D000677 ORTHO05D000727 3.3e-12 75.5 101 43.6
Nitab4.5_0006307g0050 Nicotiana tabacum HOM05D000677 ORTHO05D000727 2.2e-11 72.8 78 48.7
SEGI_40315 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 2.2e-11 72.8 119 37.8
AUR62037236 Chenopodium quinoa HOM05D000677 ORTHO05D000727 4.8e-11 71.6 67 50.7
CsaV3_5G024640 Cucumis sativus L. HOM05D000677 ORTHO05D000727 6.3e-11 71.2 107 40.2
Nitab4.5_0001029g0090 Nicotiana tabacum HOM05D000677 ORTHO05D000727 1.8e-10 69.7 107 41.1
TWI38G1249 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 1.8e-10 69.7 114 38.6
SMO356G0136 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 1.5e-09 66.6 84 39.3
SMO356G0026 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 2.2e-08 62.8 72 41.7
SEGI_32521 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.1e-07 60.5 100 37.0


User provided reference genes

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