Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p012356 Quercus lobata HOM05D017059 ORTHO05D002715 6.5e-72 274.2 169 100.0
QL04p012299 Quercus lobata HOM05D017059 ORTHO05D002715 7.7e-41 171.0 112 84.8
QL04p012988 Quercus lobata HOM05D000156 ORTHO05D002715 3.4e-36 155.6 257 49.4
QL93p2000_0053 Quercus lobata HOM05D017059 ORTHO05D002715 7.0e-34 147.9 105 78.1
QL04p012371 Quercus lobata HOM05D000156 ORTHO05D002715 2.7e-33 146.0 257 48.6
QL04p012977 Quercus lobata HOM05D017059 ORTHO05D002715 1.9e-31 139.8 103 75.7
QL04p012945 Quercus lobata HOM05D017059 ORTHO05D002715 3.3e-31 139.0 119 67.2
QL04p012360 Quercus lobata HOM05D017059 ORTHO05D002715 5.6e-31 138.3 119 70.6
QL04p012885 Quercus lobata HOM05D017059 ORTHO05D002715 1.5e-28 130.2 101 76.2
QL04p012302 Quercus lobata HOM05D017059 ORTHO05D002715 7.0e-26 121.3 98 73.5
CiPaw.14G005000 Carya illinoinensis HOM05D000156 ORTHO05D002715 1.4e-18 97.1 258 32.6
Haze_03104 Corylus avellana HOM05D000156 ORTHO05D002715 4.6e-17 92.0 257 33.1
FAN01G1538 Fragaria x ananassa HOM05D000156 ORTHO05D002715 6.0e-17 91.7 244 33.2
FvH4_7g02140 Fragaria vesca HOM05D000156 ORTHO05D002715 1.7e-16 90.1 244 32.4
FAN06G2001 Fragaria x ananassa HOM05D000156 ORTHO05D002715 1.7e-16 90.1 244 32.4
FAN10G1302 Fragaria x ananassa HOM05D000156 ORTHO05D002715 8.6e-16 87.8 243 32.1
RcHm_v2.0_Chr1g0319351 Rosa chinensis HOM05D000156 ORTHO05D002715 2.5e-15 86.3 246 32.1
VMungo1127G1204 Vigna mungo HOM05D000156 ORTHO05D002715 4.3e-15 85.5 257 32.3
Atru.chr11.2561 Acer truncatum HOM05D000156 ORTHO05D002715 9.5e-15 84.3 260 30.0
Phvul.005G033800 Phaseolus vulgaris HOM05D000156 ORTHO05D002715 1.2e-14 84.0 254 30.7
Thecc.10G003100 Theobroma cacao HOM05D000156 ORTHO05D002715 1.6e-14 83.6 258 29.1
Dinv05031 Davidia involucrata HOM05D000156 ORTHO05D002715 2.1e-14 83.2 250 31.6
FAN03G1059 Fragaria x ananassa HOM05D000156 ORTHO05D002715 1.4e-13 80.5 244 30.7
Phvul.011G014100 Phaseolus vulgaris HOM05D000156 ORTHO05D002715 1.8e-13 80.1 258 33.7
TAR623G1675 Trochodendron aralioides HOM05D000156 ORTHO05D002715 2.3e-13 79.7 238 30.7
Lj3g0020554 Lotus japonicus HOM05D000156 ORTHO05D002715 3.1e-13 79.3 252 29.0
GSVIVG01000865001 Vitis vinifera HOM05D000156 ORTHO05D002715 3.1e-13 79.3 259 30.1
Glyma.09G225300 Glycine max HOM05D000156 ORTHO05D002715 1.2e-12 77.4 254 29.9
Ciclev10031481m.g Citrus clementina HOM05D000156 ORTHO05D002715 2.6e-12 76.3 256 29.3
VMungo1080G0683 Vigna mungo HOM05D000156 ORTHO05D002715 2.6e-12 76.3 234 29.1
TWI38G0747 Tripterygium wilfordii HOM05D000156 ORTHO05D002715 7.5e-12 74.7 258 32.9
Hma1.2p1_0579F.1_g182690 Hydrangea macrophylla HOM05D000156 ORTHO05D002715 9.9e-12 74.3 258 27.9
Psat0s5573g0080 Pisum sativum HOM05D000156 ORTHO05D002715 5.4e-10 68.6 250 31.6
Rhsim07G0061700 Rhododendron simsii HOM05D000156 ORTHO05D002715 1.6e-09 67.0 251 27.9
Ca_26246_v3 Cicer arietinum L. HOM05D000156 ORTHO05D002715 3.9e-08 62.4 241 27.4
Glyma.12G011600 Glycine max HOM05D000156 ORTHO05D002715 5.1e-08 62.0 145 36.6
Prupe.2G026800 Prunus persica HOM05D000156 ORTHO05D002715 5.1e-08 62.0 255 26.7
CANSAT80G0587 Cannabis sativa HOM05D000156 ORTHO05D002715 8.6e-08 61.2 239 27.6
Lalb_Chr01g0000581 Lupinus albus HOM05D000156 ORTHO05D002715 1.5e-07 60.5 236 28.0
Lj3g0014501 Lotus japonicus HOM05D000156 ORTHO05D002715 1.9e-07 60.1 257 28.0
Duzib114G1024 Durio zibethinus HOM05D000156 ORTHO05D002715 3.3e-07 59.3 258 26.4
Gohir.D06G164600 Gossypium hirsutum HOM05D000156 ORTHO05D002715 5.6e-07 58.5 243 29.6
Thhalv10013564m.g Eutrema salsugineum HOM05D000156 ORTHO05D002715 7.3e-07 58.2 48 56.2
CAN.G410.28 Capsicum annuum HOM05D000156 ORTHO05D002715 9.5e-07 57.8 256 25.8
CARHR199970 Cardamine hirsuta HOM05D000156 ORTHO05D002715 9.5e-07 57.8 48 56.2
AUR62026117 Chenopodium quinoa HOM05D000156 ORTHO05D002715 1.2e-06 57.4 201 26.9
Lalb_Chr25g0282711 Lupinus albus HOM05D000156 ORTHO05D002715 1.2e-06 57.4 223 29.6
Gorai.010G192000 Gossypium raimondii HOM05D000156 ORTHO05D002715 2.1e-06 56.6 243 29.2
TPR.G20246 Trifolium pratense HOM05D000156 ORTHO05D002715 2.1e-06 56.6 238 26.5
TPR.G667 Trifolium pratense HOM05D000156 ORTHO05D002715 2.1e-06 56.6 121 36.4
BcaB01g05357 Brassica carinata HOM05D000156 ORTHO05D002715 2.8e-06 56.2 79 35.4
Cfa016757 Carpinus fangiana HOM05D000156 ORTHO05D002715 2.8e-06 56.2 239 27.2
Aa31LG11G7630 Aethionema arabicum HOM05D000156 ORTHO05D002715 3.6e-06 55.8 48 54.2
CSS0001203 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D002715 3.6e-06 55.8 42 59.5
MD02G1297300 Malus domestica HOM05D000156 ORTHO05D002715 3.6e-06 55.8 48 52.1
AL6G24080 Arabidopsis lyrata HOM05D000156 ORTHO05D002715 6.2e-06 55.1 42 59.5
Carub.0006s1162 Capsella rubella HOM05D000156 ORTHO05D002715 6.2e-06 55.1 39 64.1
Cpa.g.sc197.18 Carica papaya HOM05D000156 ORTHO05D002715 6.2e-06 55.1 237 27.4
Sp6g30560 Schrenkiella parvula HOM05D000156 ORTHO05D002715 6.2e-06 55.1 42 59.5
AT5G13460 Arabidopsis thaliana HOM05D000156 ORTHO05D002715 8.1e-06 54.7 42 59.5
Ca_02375_v3 Cicer arietinum L. HOM05D000156 ORTHO05D002715 8.1e-06 54.7 112 37.5
MBI13_g30228_MAGBIO Magnolia biondii HOM05D000156 ORTHO05D002715 8.1e-06 54.7 239 24.7


User provided reference genes

Program Settings