Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p012299 Quercus lobata HOM05D017059 ORTHO05D002715 9.3e-57 223.4 120 100.0
QL04p012356 Quercus lobata HOM05D017059 ORTHO05D002715 1.2e-40 169.9 112 84.8
QL04p012945 Quercus lobata HOM05D017059 ORTHO05D002715 1.2e-40 169.9 122 76.2
QL04p012360 Quercus lobata HOM05D017059 ORTHO05D002715 6.7e-39 164.1 120 78.3
QL93p2000_0053 Quercus lobata HOM05D017059 ORTHO05D002715 1.0e-31 140.2 114 70.2
QL04p012988 Quercus lobata HOM05D000156 ORTHO05D002715 1.8e-31 139.4 121 66.1
QL04p012977 Quercus lobata HOM05D017059 ORTHO05D002715 1.7e-29 132.9 91 83.5
QL04p012371 Quercus lobata HOM05D000156 ORTHO05D002715 1.8e-28 129.4 121 64.5
QL04p012885 Quercus lobata HOM05D017059 ORTHO05D002715 1.8e-28 129.4 89 83.1
QL04p012302 Quercus lobata HOM05D017059 ORTHO05D002715 1.9e-25 119.4 85 81.2
Haze_03104 Corylus avellana HOM05D000156 ORTHO05D002715 2.7e-16 89.0 122 51.6
Phvul.011G014100 Phaseolus vulgaris HOM05D000156 ORTHO05D002715 8.0e-16 87.4 140 42.9
CiPaw.14G005000 Carya illinoinensis HOM05D000156 ORTHO05D002715 1.4e-15 86.7 123 47.2
VMungo1127G1204 Vigna mungo HOM05D000156 ORTHO05D002715 1.8e-15 86.3 138 44.2
FAN01G1538 Fragaria x ananassa HOM05D000156 ORTHO05D002715 5.2e-15 84.7 123 46.3
FvH4_7g02140 Fragaria vesca HOM05D000156 ORTHO05D002715 8.8e-15 84.0 123 45.5
FAN06G2001 Fragaria x ananassa HOM05D000156 ORTHO05D002715 8.8e-15 84.0 123 45.5
FAN10G1302 Fragaria x ananassa HOM05D000156 ORTHO05D002715 2.6e-14 82.4 122 45.1
Glyma.09G225300 Glycine max HOM05D000156 ORTHO05D002715 1.3e-13 80.1 122 45.9
TAR623G1675 Trochodendron aralioides HOM05D000156 ORTHO05D002715 2.2e-13 79.3 117 44.4
Lj3g0020554 Lotus japonicus HOM05D000156 ORTHO05D002715 4.8e-13 78.2 118 44.9
FAN03G1059 Fragaria x ananassa HOM05D000156 ORTHO05D002715 6.3e-13 77.8 123 43.9
Atru.chr11.2561 Acer truncatum HOM05D000156 ORTHO05D002715 8.3e-13 77.4 107 45.8
Glyma.12G011600 Glycine max HOM05D000156 ORTHO05D002715 4.1e-12 75.1 122 44.3
RcHm_v2.0_Chr1g0319351 Rosa chinensis HOM05D000156 ORTHO05D002715 5.4e-12 74.7 125 42.4
Phvul.005G033800 Phaseolus vulgaris HOM05D000156 ORTHO05D002715 9.1e-12 73.9 120 41.7
Thecc.10G003100 Theobroma cacao HOM05D000156 ORTHO05D002715 2.0e-11 72.8 123 41.5
Dinv05031 Davidia involucrata HOM05D000156 ORTHO05D002715 2.7e-11 72.4 131 40.5
GSVIVG01000865001 Vitis vinifera HOM05D000156 ORTHO05D002715 2.7e-11 72.4 116 44.8
TWI38G0747 Tripterygium wilfordii HOM05D000156 ORTHO05D002715 7.7e-11 70.9 123 39.8
VMungo1080G0683 Vigna mungo HOM05D000156 ORTHO05D002715 2.3e-10 69.3 105 41.9
Psat0s5573g0080 Pisum sativum HOM05D000156 ORTHO05D002715 3.8e-10 68.6 102 46.1
TPR.G667 Trifolium pratense HOM05D000156 ORTHO05D002715 8.6e-10 67.4 121 38.8
Ciclev10031481m.g Citrus clementina HOM05D000156 ORTHO05D002715 1.1e-09 67.0 122 40.2
Hma1.2p1_0579F.1_g182690 Hydrangea macrophylla HOM05D000156 ORTHO05D002715 1.5e-09 66.6 124 37.9
Ca_26246_v3 Cicer arietinum L. HOM05D000156 ORTHO05D002715 9.5e-09 63.9 122 37.7
Rhsim07G0061700 Rhododendron simsii HOM05D000156 ORTHO05D002715 1.2e-08 63.5 119 37.8
Lj3g0014501 Lotus japonicus HOM05D000156 ORTHO05D002715 3.6e-08 62.0 122 38.5
Lalb_Chr01g0000581 Lupinus albus HOM05D000156 ORTHO05D002715 1.8e-07 59.7 116 37.9
Dinv32061 Davidia involucrata HOM05D000156 ORTHO05D002715 2.3e-07 59.3 115 40.9
vmacro13719 Vaccinium macrocarpon HOM05D000156 ORTHO05D002715 4.0e-07 58.5 120 37.5
Gohir.A10G242300 Gossypium hirsutum HOM05D000156 ORTHO05D002715 5.2e-07 58.2 110 39.1
Gorai.011G295300 Gossypium raimondii HOM05D000156 ORTHO05D002715 8.9e-07 57.4 94 42.6
Dinv39674 Davidia involucrata HOM05D000156 ORTHO05D002715 1.2e-06 57.0 70 47.1
Gohir.D10G254300 Gossypium hirsutum HOM05D000156 ORTHO05D002715 1.2e-06 57.0 94 42.6
TPR.G20246 Trifolium pratense HOM05D000156 ORTHO05D002715 1.2e-06 57.0 118 35.6
Nn7g36436 Nelumbo nucifera HOM05D000156 ORTHO05D002715 2.0e-06 56.2 117 35.0
Duzib114G1024 Durio zibethinus HOM05D000156 ORTHO05D002715 2.6e-06 55.8 124 36.3
Sabra06G0031600 Salix brachista HOM05D000156 ORTHO05D002715 5.7e-06 54.7 117 35.9
TPR.G20585 Trifolium pratense HOM05D000156 ORTHO05D002715 5.7e-06 54.7 125 33.6
CANSAT80G0587 Cannabis sativa HOM05D000156 ORTHO05D002715 7.5e-06 54.3 82 42.7
Manes.11G002000 Manihot esculenta HOM05D000156 ORTHO05D002715 7.5e-06 54.3 117 38.5


User provided reference genes

Program Settings