Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p004391 Quercus lobata HOM05D003599 ORTHO05D004221 1.7e-53 212.6 104 100.0
QL04p004288 Quercus lobata HOM05D003599 ORTHO05D004221 3.1e-23 112.1 92 70.7
QL04p003812 Quercus lobata HOM05D003599 ORTHO05D004221 4.4e-22 108.2 92 69.6
QL04p003920 Quercus lobata HOM05D003599 ORTHO05D004221 2.9e-21 105.5 92 69.6
QL04p004701 Quercus lobata HOM05D000311 ORTHO05D000183 3.2e-20 102.1 92 66.3
QL04p003768 Quercus lobata HOM05D003599 ORTHO05D004221 5.4e-20 101.3 70 82.9
QL04p003614 Quercus lobata HOM05D003599 ORTHO05D004221 2.1e-19 99.4 91 65.9
Haze_03250 Corylus avellana HOM05D003599 ORTHO05D004221 5.6e-17 91.3 90 58.9
CiPaw.13G001900 Carya illinoinensis HOM05D003599 ORTHO05D004221 1.6e-16 89.7 90 60.0
QL93p0073_0296 Quercus lobata HOM05D003599 ORTHO05D004221 3.6e-16 88.6 48 89.6
Actinidia31044 Actinidia chinensis HOM05D003599 ORTHO05D004221 1.2e-14 83.6 92 56.5
Prupe.2G007800 Prunus persica HOM05D003599 ORTHO05D004221 3.8e-13 78.6 91 54.9
Dinv43904 Davidia involucrata HOM05D003599 ORTHO05D004221 4.9e-13 78.2 91 53.8
Rhsim07G0053800 Rhododendron simsii HOM05D003599 ORTHO05D004221 1.4e-12 76.6 92 51.1
vmacro13647 Vaccinium macrocarpon HOM05D003599 ORTHO05D004221 1.2e-11 73.6 92 53.3
Duzib268G0099 Durio zibethinus HOM05D003599 ORTHO05D004221 2.1e-11 72.8 94 50.0
Cpa.g.sc234.1 Carica papaya HOM05D003599 ORTHO05D004221 2.3e-10 69.3 95 50.5
Thecc.01G414600 Theobroma cacao HOM05D003599 ORTHO05D004221 2.3e-10 69.3 94 50.0
ClCG10G012550 Citrullus lanatus HOM05D003599 ORTHO05D004221 6.7e-10 67.8 93 52.7
MD02G1316400 Malus domestica HOM05D003599 ORTHO05D004221 6.7e-10 67.8 92 50.0
Atru.chr11.2631 Acer truncatum HOM05D003599 ORTHO05D004221 8.7e-10 67.4 96 47.9
GSVIVG01032046001 Vitis vinifera HOM05D003599 ORTHO05D004221 8.7e-10 67.4 106 45.3
Manes.07G003200 Manihot esculenta HOM05D003599 ORTHO05D004221 1.1e-09 67.0 91 49.5
MD07G1005500 Malus domestica HOM05D003599 ORTHO05D004221 1.5e-09 66.6 92 51.1
COL.COLO4_23904 Corchorus olitorius HOM05D003599 ORTHO05D004221 3.3e-09 65.5 94 48.9
MSTRG.17057 Avicennia marina HOM05D003599 ORTHO05D004221 5.6e-09 64.7 95 48.4
TWI53G1897 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 7.4e-09 64.3 91 50.5
Ciclev10030514m.g Citrus clementina HOM05D003599 ORTHO05D004221 9.6e-09 63.9 94 46.8
Gohir.D08G167000 Gossypium hirsutum HOM05D003599 ORTHO05D004221 1.3e-08 63.5 96 49.0
Gorai.004G174400 Gossypium raimondii HOM05D003599 ORTHO05D004221 1.3e-08 63.5 96 49.0
RcHm_v2.0_Chr4g0410621 Rosa chinensis HOM05D003599 ORTHO05D004221 1.3e-08 63.5 92 46.7
TWI73G0659 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 1.3e-08 63.5 91 47.3
CANSAT56G1134 Cannabis sativa HOM05D003599 ORTHO05D004221 1.6e-08 63.2 91 48.4
Sed0009971 Sechium edule HOM05D003599 ORTHO05D004221 2.8e-08 62.4 93 50.5
CsaV3_3G032340 Cucumis sativus L. HOM05D003599 ORTHO05D004221 3.7e-08 62.0 92 46.7
Dinv43470 Davidia involucrata HOM05D003599 ORTHO05D004221 3.7e-08 62.0 48 62.5
Lj3g0018349 Lotus japonicus HOM05D003599 ORTHO05D004221 3.7e-08 62.0 93 49.5
Lalb_Chr25g0283241 Lupinus albus HOM05D003599 ORTHO05D004221 3.7e-08 62.0 91 44.0
Potri.001G271200 Populus trichocarpa HOM05D003599 ORTHO05D004221 3.7e-08 62.0 91 49.5
Actinidia31688 Actinidia chinensis HOM05D003599 ORTHO05D004221 6.2e-08 61.2 82 45.1
FAN17G0189 Fragaria x ananassa HOM05D003599 ORTHO05D004221 8.1e-08 60.8 90 47.8
Nn7g36074 Nelumbo nucifera HOM05D003599 ORTHO05D004221 8.1e-08 60.8 93 46.2
Nitab4.5_0001542g0140 Nicotiana tabacum HOM05D003599 ORTHO05D004221 8.1e-08 60.8 93 45.2
Ca_26231_v3 Cicer arietinum L. HOM05D003599 ORTHO05D004221 1.1e-07 60.5 103 45.6
MELO3C023955.2 Cucumis melo HOM05D003599 ORTHO05D004221 1.1e-07 60.5 93 48.4
Nitab4.5_0004883g0020 Nicotiana tabacum HOM05D003599 ORTHO05D004221 1.1e-07 60.5 93 46.2
Potri.009G065300 Populus trichocarpa HOM05D003599 ORTHO05D004221 1.4e-07 60.1 91 47.3
Sabra16G0166600 Salix brachista HOM05D003599 ORTHO05D004221 1.4e-07 60.1 91 50.5
FvH4_4g12380 Fragaria vesca HOM05D003599 ORTHO05D004221 1.8e-07 59.7 90 46.7
FAN12G0010 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.8e-07 59.7 90 46.7
FAN12G2088 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.8e-07 59.7 90 46.7
FAN22G1903 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.8e-07 59.7 90 46.7
Migut.B01342 Erythranthe guttata HOM05D003599 ORTHO05D004221 2.4e-07 59.3 98 48.0
Oeu034893.1 Olea europaea HOM05D003599 ORTHO05D004221 2.4e-07 59.3 92 43.5
Cc02_g27450 Coffea canephora HOM05D003599 ORTHO05D004221 3.1e-07 58.9 92 47.8
Eucgr.J01252 Eucalyptus grandis HOM05D003599 ORTHO05D004221 3.1e-07 58.9 91 46.2
Glyma.08G152400 Glycine max HOM05D003599 ORTHO05D004221 3.1e-07 58.9 92 45.7
QL04p004437 Quercus lobata HOM05D003599 ORTHO05D004221 3.1e-07 58.9 67 56.7
Peaxi162Scf00058g00215 Petunia axillaris HOM05D003599 ORTHO05D004221 5.3e-07 58.2 92 43.5
Glyma.15G271800 Glycine max HOM05D003599 ORTHO05D004221 9.0e-07 57.4 92 42.4
Phvul.005G037000 Phaseolus vulgaris HOM05D003599 ORTHO05D004221 9.0e-07 57.4 91 44.0
Lalb_Chr20g0108081 Lupinus albus HOM05D003599 ORTHO05D004221 2.0e-06 56.2 91 44.0
FAN07G2146 Fragaria x ananassa HOM05D003599 ORTHO05D004221 2.6e-06 55.8 90 45.6
Psat5g207160 Pisum sativum HOM05D003599 ORTHO05D004221 2.6e-06 55.8 102 45.1
PGSC0003DMG400025257 Solanum tuberosum HOM05D003599 ORTHO05D004221 2.6e-06 55.8 92 43.5
TPR.G12253 Trifolium pratense HOM05D003599 ORTHO05D004221 3.4e-06 55.5 105 39.0
Sabra09G0048500 Salix brachista HOM05D003599 ORTHO05D004221 5.8e-06 54.7 91 47.3


User provided reference genes

Program Settings