Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p003812 Quercus lobata HOM05D003599 ORTHO05D004221 4.9e-64 247.7 128 100.0
QL04p004288 Quercus lobata HOM05D003599 ORTHO05D004221 2.5e-47 192.2 114 88.6
QL04p003920 Quercus lobata HOM05D003599 ORTHO05D004221 1.8e-45 186.0 114 87.7
QL04p004701 Quercus lobata HOM05D000311 ORTHO05D000183 1.6e-43 179.5 112 83.9
Haze_03250 Corylus avellana HOM05D003599 ORTHO05D004221 1.9e-39 166.0 114 76.3
QL04p003614 Quercus lobata HOM05D003599 ORTHO05D004221 1.2e-38 163.3 114 78.9
CiPaw.13G001900 Carya illinoinensis HOM05D003599 ORTHO05D004221 3.6e-38 161.8 114 75.4
Actinidia31044 Actinidia chinensis HOM05D003599 ORTHO05D004221 1.1e-36 156.8 114 72.8
Prupe.2G007800 Prunus persica HOM05D003599 ORTHO05D004221 1.8e-34 149.4 114 70.2
Dinv43904 Davidia involucrata HOM05D003599 ORTHO05D004221 2.4e-34 149.1 111 69.4
Rhsim07G0053800 Rhododendron simsii HOM05D003599 ORTHO05D004221 9.1e-34 147.1 112 67.9
vmacro13647 Vaccinium macrocarpon HOM05D003599 ORTHO05D004221 1.5e-33 146.4 112 70.5
Manes.07G003200 Manihot esculenta HOM05D003599 ORTHO05D004221 1.1e-31 140.2 114 67.5
Potri.009G065300 Populus trichocarpa HOM05D003599 ORTHO05D004221 1.1e-31 140.2 114 69.3
MD07G1005500 Malus domestica HOM05D003599 ORTHO05D004221 1.4e-31 139.8 115 69.6
Cpa.g.sc234.1 Carica papaya HOM05D003599 ORTHO05D004221 1.9e-31 139.4 116 68.1
MD02G1316400 Malus domestica HOM05D003599 ORTHO05D004221 2.5e-31 139.0 115 67.0
GSVIVG01032046001 Vitis vinifera HOM05D003599 ORTHO05D004221 5.5e-31 137.9 129 60.5
TWI53G1897 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 1.2e-30 136.7 114 67.5
Oeu034893.1 Olea europaea HOM05D003599 ORTHO05D004221 1.6e-30 136.3 114 64.9
CANSAT56G1134 Cannabis sativa HOM05D003599 ORTHO05D004221 2.1e-30 136.0 114 65.8
TWI73G0659 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 2.1e-30 136.0 114 65.8
Potri.001G271200 Populus trichocarpa HOM05D003599 ORTHO05D004221 2.7e-30 135.6 114 67.5
MSTRG.17057 Avicennia marina HOM05D003599 ORTHO05D004221 6.1e-30 134.4 115 66.1
QL93p0073_0296 Quercus lobata HOM05D003599 ORTHO05D004221 7.9e-30 134.0 80 87.5
ClCG10G012550 Citrullus lanatus HOM05D003599 ORTHO05D004221 1.4e-29 133.3 115 67.0
QL04p003768 Quercus lobata HOM05D003599 ORTHO05D004221 1.4e-29 133.3 114 69.3
Duzib268G0099 Durio zibethinus HOM05D003599 ORTHO05D004221 2.3e-29 132.5 114 61.4
Lalb_Chr25g0283241 Lupinus albus HOM05D003599 ORTHO05D004221 2.3e-29 132.5 114 61.4
Atru.chr11.2631 Acer truncatum HOM05D003599 ORTHO05D004221 3.0e-29 132.1 118 62.7
Migut.B01342 Erythranthe guttata HOM05D003599 ORTHO05D004221 3.0e-29 132.1 120 65.0
Phvul.005G037000 Phaseolus vulgaris HOM05D003599 ORTHO05D004221 3.0e-29 132.1 114 63.2
Sed0009971 Sechium edule HOM05D003599 ORTHO05D004221 3.9e-29 131.7 115 67.8
Eucgr.J01252 Eucalyptus grandis HOM05D003599 ORTHO05D004221 6.7e-29 131.0 113 67.3
Sabra09G0048500 Salix brachista HOM05D003599 ORTHO05D004221 8.8e-29 130.6 114 67.5
Sed0001465 Sechium edule HOM05D003599 ORTHO05D004221 8.8e-29 130.6 115 67.0
Glyma.15G271800 Glycine max HOM05D003599 ORTHO05D004221 1.1e-28 130.2 128 57.8
Ca_26231_v3 Cicer arietinum L. HOM05D003599 ORTHO05D004221 1.5e-28 129.8 126 59.5
Sabra16G0166600 Salix brachista HOM05D003599 ORTHO05D004221 1.5e-28 129.8 114 67.5
Lj3g0018349 Lotus japonicus HOM05D003599 ORTHO05D004221 2.0e-28 129.4 116 63.8
Thecc.01G414600 Theobroma cacao HOM05D003599 ORTHO05D004221 2.0e-28 129.4 114 62.3
Ciclev10030514m.g Citrus clementina HOM05D003599 ORTHO05D004221 2.6e-28 129.0 115 64.3
MELO3C023955.2 Cucumis melo HOM05D003599 ORTHO05D004221 5.7e-28 127.9 114 65.8
Psat5g207160 Pisum sativum HOM05D003599 ORTHO05D004221 7.4e-28 127.5 125 60.0
CsaV3_3G032340 Cucumis sativus L. HOM05D003599 ORTHO05D004221 9.7e-28 127.1 113 63.7
Glyma.08G152400 Glycine max HOM05D003599 ORTHO05D004221 9.7e-28 127.1 115 60.9
Gohir.D08G167000 Gossypium hirsutum HOM05D003599 ORTHO05D004221 9.7e-28 127.1 117 62.4
Gorai.004G174400 Gossypium raimondii HOM05D003599 ORTHO05D004221 9.7e-28 127.1 117 62.4
Nitab4.5_0004883g0020 Nicotiana tabacum HOM05D003599 ORTHO05D004221 1.3e-27 126.7 115 61.7
COL.COLO4_23904 Corchorus olitorius HOM05D003599 ORTHO05D004221 2.8e-27 125.6 114 62.3
Nitab4.5_0001542g0140 Nicotiana tabacum HOM05D003599 ORTHO05D004221 2.8e-27 125.6 115 60.0
VMungo1080G1621 Vigna mungo HOM05D003599 ORTHO05D004221 2.8e-27 125.6 114 61.4
Actinidia31688 Actinidia chinensis HOM05D003599 ORTHO05D004221 3.7e-27 125.2 114 57.9
Peaxi162Scf00058g00215 Petunia axillaris HOM05D003599 ORTHO05D004221 4.8e-27 124.8 114 59.6
RcHm_v2.0_Chr4g0410621 Rosa chinensis HOM05D003599 ORTHO05D004221 1.1e-26 123.6 115 60.9
Cc02_g27450 Coffea canephora HOM05D003599 ORTHO05D004221 1.4e-26 123.2 111 65.8
TPR.G12253 Trifolium pratense HOM05D003599 ORTHO05D004221 1.8e-26 122.9 123 54.5
PGSC0003DMG400025257 Solanum tuberosum HOM05D003599 ORTHO05D004221 3.1e-26 122.1 127 55.9
Nn7g36074 Nelumbo nucifera HOM05D003599 ORTHO05D004221 4.1e-26 121.7 112 60.7
Lalb_Chr20g0108081 Lupinus albus HOM05D003599 ORTHO05D004221 9.1e-26 120.6 114 58.8
FAN17G0189 Fragaria x ananassa HOM05D003599 ORTHO05D004221 5.9e-25 117.9 114 59.6
FAN22G1903 Fragaria x ananassa HOM05D003599 ORTHO05D004221 5.9e-25 117.9 114 59.6
arahy.Tifrunner.gnm1.ann1.X69RYV Arachis hypogaea HOM05D003599 ORTHO05D004221 7.7e-25 117.5 114 59.6
FvH4_4g12380 Fragaria vesca HOM05D003599 ORTHO05D004221 1.3e-24 116.7 114 58.8
FAN12G0010 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.3e-24 116.7 114 58.8
FAN12G2088 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.3e-24 116.7 114 58.8
arahy.Tifrunner.gnm1.ann1.V362W9 Arachis hypogaea HOM05D003599 ORTHO05D004221 1.7e-24 116.3 114 58.8
MBI01_g43277_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 1.7e-24 116.3 121 55.4
unitig_0.g1375 Utricularia gibba HOM05D003599 ORTHO05D004221 1.1e-23 113.6 116 57.8
FAN07G2146 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.9e-23 112.8 114 57.9
THA.LOC104801983 Tarenaya hassleriana HOM05D003599 ORTHO05D004221 2.5e-23 112.5 115 58.3
Medtr3g027610 Medicago truncatula HOM05D003599 ORTHO05D004221 3.2e-23 112.1 125 56.0
QL04p004391 Quercus lobata HOM05D003599 ORTHO05D004221 1.2e-22 110.2 92 69.6
QL04p004437 Quercus lobata HOM05D003599 ORTHO05D004221 2.1e-22 109.4 71 77.5
unitig_61.g26447 Utricularia gibba HOM05D003599 ORTHO05D004221 2.7e-22 109.0 115 56.5
Lj3g0008997 Lotus japonicus HOM05D003599 ORTHO05D004221 6.1e-22 107.8 115 57.4
Lj7C568T3 Lonicera japonica HOM05D003599 ORTHO05D004221 1.0e-21 107.1 115 58.3
Sc11g0009360 Simmondsia chinensis HOM05D003599 ORTHO05D004221 1.1e-20 103.6 113 54.9
ATR0605G051 Amborella trichopoda HOM05D003599 ORTHO05D004221 1.5e-20 103.2 116 51.7
Dinv43470 Davidia involucrata HOM05D003599 ORTHO05D004221 7.4e-20 100.9 78 66.7
PGR044G0248 Punica granatum HOM05D003599 ORTHO05D004221 9.7e-20 100.5 128 51.6
Aa31LG10G7230 Aethionema arabicum HOM05D003599 ORTHO05D004221 1.7e-19 99.8 110 53.6
CAN.G1393.20 Capsicum annuum HOM05D003599 ORTHO05D004221 4.8e-19 98.2 114 51.8
PSO384G0358 Papaver somniferum HOM05D003599 ORTHO05D004221 4.8e-19 98.2 115 54.8
DCAR_029635 Daucus carota HOM05D003599 ORTHO05D004221 6.3e-19 97.8 116 49.1
Actinidia32321 Actinidia chinensis HOM05D003599 ORTHO05D004221 1.8e-18 96.3 71 71.8
PSO339G0158 Papaver somniferum HOM05D003599 ORTHO05D004221 2.4e-18 95.9 115 53.9
HanXRQChr01g0017271 Helianthus annuus HOM05D003599 ORTHO05D004221 1.2e-17 93.6 109 47.7
arahy.Tifrunner.gnm1.ann1.7I49QA Arachis hypogaea HOM05D003599 ORTHO05D004221 1.7e-16 89.7 110 53.6
TPR.G12134 Trifolium pratense HOM05D003599 ORTHO05D004221 6.5e-16 87.8 58 74.1
Lsat_1_v5_gn_1_110320 Lactuca sativa HOM05D003599 ORTHO05D004221 1.1e-15 87.0 114 50.9
Carub.0005s1848 Capsella rubella HOM05D003599 ORTHO05D004221 1.5e-15 86.7 111 50.5
Sopen01g033750 Solanum pennellii HOM05D003599 ORTHO05D004221 1.5e-15 86.7 114 48.2
CARHR161880 Cardamine hirsuta HOM05D003599 ORTHO05D004221 1.9e-15 86.3 111 53.2
CSS0018905 Camellia sinensis var. sinensis HOM05D003599 ORTHO05D004221 2.5e-15 85.9 115 51.3
AL5G32710 Arabidopsis lyrata HOM05D003599 ORTHO05D004221 3.2e-15 85.5 111 50.5
AT3G52140 Arabidopsis thaliana HOM05D003599 ORTHO05D004221 7.2e-15 84.3 111 49.5
Migut.N01485 Erythranthe guttata HOM05D003599 ORTHO05D004221 9.4e-15 84.0 111 50.5
SalBow4G2031 Salvia bowleyana HOM05D003599 ORTHO05D004221 1.2e-14 83.6 114 47.4
SEGI_10833 Sequoiadendron giganteum HOM05D003599 ORTHO05D004221 1.2e-14 83.6 125 43.2
CDE05G2426 Ceratophyllum demersum HOM05D003599 ORTHO05D004221 3.6e-14 82.0 114 46.5
ECA248G3304 Erigeron canadensis HOM05D003599 ORTHO05D004221 1.4e-13 80.1 93 51.6
AUR62009368 Chenopodium quinoa HOM05D003599 ORTHO05D004221 2.3e-13 79.3 115 48.7
Thhalv10010065m.g Eutrema salsugineum HOM05D003599 ORTHO05D004221 4.0e-13 78.6 110 47.3
AUR62023049 Chenopodium quinoa HOM05D003599 ORTHO05D004221 5.2e-13 78.2 114 46.5
HPP92_003005 Vanilla planifolia HOM05D003599 ORTHO05D004221 2.0e-12 76.3 114 47.4
Gohir.A08G146100 Gossypium hirsutum HOM05D003599 ORTHO05D004221 3.4e-12 75.5 116 46.6
HPP92_003004 Vanilla planifolia HOM05D003599 ORTHO05D004221 5.7e-12 74.7 114 46.5
MBI01_g15744_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 1.7e-11 73.2 94 45.7
arahy.Tifrunner.gnm1.ann1.SKP1EQ Arachis hypogaea HOM05D003599 ORTHO05D004221 4.8e-11 71.6 82 54.9
Sp5g10140 Schrenkiella parvula HOM05D003599 ORTHO05D004221 2.4e-10 69.3 111 46.8
BraA09t39983Z Brassica rapa HOM05D003599 ORTHO05D004221 4.1e-10 68.6 112 46.4
Actinidia28306 Actinidia chinensis HOM05D003599 ORTHO05D004221 1.2e-09 67.0 38 84.2
A04p07220 Brassica napus HOM05D003599 ORTHO05D004221 1.2e-09 67.0 111 41.4
BraA04t16417Z Brassica rapa HOM05D003599 ORTHO05D004221 1.2e-09 67.0 111 41.4
SHI28922 Sapria himalayana HOM05D003599 ORTHO05D004221 2.0e-09 66.2 60 58.3
C04p40780 Brassica napus HOM05D003599 ORTHO05D004221 5.9e-09 64.7 112 42.9
BolC4t25662H Brassica oleracea HOM05D003599 ORTHO05D004221 5.9e-09 64.7 112 42.9
VMungo1215G1265 Vigna mungo HOM05D003599 ORTHO05D004221 1.3e-08 63.5 36 80.6
BcaC02g09276 Brassica carinata HOM05D003599 ORTHO05D004221 2.9e-08 62.4 112 42.0
A09p45200 Brassica napus HOM05D003599 ORTHO05D004221 6.5e-08 61.2 110 44.5
Aqoxy1G00213 Aquilegia oxysepala HOM05D003599 ORTHO05D004221 1.1e-07 60.5 112 40.2
Ah.10g024830 Amaranthus hybridus HOM05D003599 ORTHO05D004221 1.5e-07 60.1 109 43.1
EL10Ac2g04309 Beta vulgaris HOM05D003599 ORTHO05D004221 1.9e-07 59.7 109 45.0
C08p27410 Brassica napus HOM05D003599 ORTHO05D004221 2.7e-06 55.8 110 39.1


User provided reference genes

Program Settings