Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p003051 Quercus lobata HOM05D032377 ORTHO05D000187 2.9e-48 194.9 98 100.0
QL04p003070 Quercus lobata HOM05D032377 ORTHO05D000187 2.9e-48 194.9 98 100.0
QL04p003054 Quercus lobata HOM05D000018 ORTHO05D000187 2.6e-17 92.0 63 74.6
QL04p003073 Quercus lobata HOM05D000018 ORTHO05D000187 2.6e-17 92.0 63 74.6
QL04p000158 Quercus lobata HOM05D000018 ORTHO05D000187 4.5e-17 91.3 63 74.6
QL04p003083 Quercus lobata HOM05D032377 ORTHO05D000187 2.2e-16 89.0 63 73.0
QL04p000135 Quercus lobata HOM05D000018 ORTHO05D000187 2.9e-16 88.6 63 73.0
Haze_03262 Corylus avellana HOM05D000018 ORTHO05D000187 1.8e-13 79.3 63 65.1
Potri.009G022800 Populus trichocarpa HOM05D000018 ORTHO05D000187 5.2e-13 77.8 63 58.7
TAR623G0964 Trochodendron aralioides HOM05D000018 ORTHO05D000187 1.5e-12 76.3 63 58.7
Sabra09G0014200 Salix brachista HOM05D000018 ORTHO05D000187 2.6e-12 75.5 63 57.1
Sabra09G0014300 Salix brachista HOM05D000018 ORTHO05D000187 2.6e-12 75.5 63 57.1
Lj3g0021215 Lotus japonicus HOM05D000018 ORTHO05D000187 4.4e-12 74.7 61 59.0
Cfa010717 Carpinus fangiana HOM05D000018 ORTHO05D000187 1.3e-11 73.2 63 61.9
Glyma.08G149800 Glycine max HOM05D000018 ORTHO05D000187 1.7e-11 72.8 65 60.0
Lalb_Chr01g0015171 Lupinus albus HOM05D000018 ORTHO05D000187 3.7e-11 71.6 64 57.8
VMungo1080G1677 Vigna mungo HOM05D000018 ORTHO05D000187 1.1e-10 70.1 68 55.9
MBI01_g20391_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D000187 7.0e-10 67.4 72 48.6
Phvul.005G039300 Phaseolus vulgaris HOM05D000018 ORTHO05D000187 1.2e-09 66.6 70 52.9
Dinv43926 Davidia involucrata HOM05D000018 ORTHO05D000187 2.0e-09 65.9 65 55.4
MBI01_g18361_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D000187 3.5e-09 65.1 63 52.4
Oeu046846.1 Olea europaea HOM05D000018 ORTHO05D000187 4.5e-09 64.7 63 49.2
Medtr3g026150 Medicago truncatula HOM05D000018 ORTHO05D000187 7.7e-09 63.9 62 53.2
Ciclev10031934m.g Citrus clementina HOM05D000018 ORTHO05D000187 1.0e-08 63.5 63 57.1
Psat5g206800 Pisum sativum HOM05D000018 ORTHO05D000187 1.0e-08 63.5 62 54.8
Manes.10G150600 Manihot esculenta HOM05D000018 ORTHO05D000187 1.3e-08 63.2 63 49.2
TWI09G0391 Tripterygium wilfordii HOM05D000018 ORTHO05D000187 1.7e-08 62.8 85 43.5
TPR.G12292 Trifolium pratense HOM05D000018 ORTHO05D000187 2.2e-08 62.4 63 54.0
Oeu046836.1 Olea europaea HOM05D000018 ORTHO05D000187 3.8e-08 61.6 63 47.6
HanXRQChr10g0288101 Helianthus annuus HOM05D000018 ORTHO05D000187 6.5e-08 60.8 63 42.9
Oeu046847.1 Olea europaea HOM05D000018 ORTHO05D000187 6.5e-08 60.8 63 44.4
Gohir.D01G037400 Gossypium hirsutum HOM05D000018 ORTHO05D000187 1.5e-07 59.7 63 47.6
Solyc02g071500.2 Solanum lycopersicum HOM05D000018 ORTHO05D000187 1.5e-07 59.7 63 49.2
Ca_28105_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000187 2.5e-07 58.9 62 53.2
Nitab4.5_0003714g0140 Nicotiana tabacum HOM05D000018 ORTHO05D000187 2.5e-07 58.9 65 47.7
Lsat_1_v5_gn_1_12321 Lactuca sativa HOM05D000018 ORTHO05D000187 5.5e-07 57.8 67 44.8
HanXRQChr02g0039421 Helianthus annuus HOM05D000018 ORTHO05D000187 7.2e-07 57.4 63 47.6
Lsat_1_v5_gn_3_103200 Lactuca sativa HOM05D000018 ORTHO05D000187 7.2e-07 57.4 63 47.6
Manes.15G099500 Manihot esculenta HOM05D000018 ORTHO05D000187 7.2e-07 57.4 64 46.9
HanXRQChr11g0345921 Helianthus annuus HOM05D000018 ORTHO05D000187 9.4e-07 57.0 63 39.7
Oeu020251.1 Olea europaea HOM05D000018 ORTHO05D000187 9.4e-07 57.0 63 44.4
ECA234G3080 Erigeron canadensis HOM05D000018 ORTHO05D000187 1.2e-06 56.6 63 44.4
Gohir.A01G046700 Gossypium hirsutum HOM05D000018 ORTHO05D000187 1.2e-06 56.6 63 46.0
Nitab4.5_0003714g0130 Nicotiana tabacum HOM05D000018 ORTHO05D000187 1.2e-06 56.6 64 48.4
Sopen02g020530 Solanum pennellii HOM05D000018 ORTHO05D000187 1.2e-06 56.6 61 50.8
CAN.G257.81 Capsicum annuum HOM05D000018 ORTHO05D000187 2.1e-06 55.8 65 46.2
Duzib235G0338 Durio zibethinus HOM05D000018 ORTHO05D000187 2.1e-06 55.8 63 46.0
Manes.03G077900 Manihot esculenta HOM05D000018 ORTHO05D000187 2.1e-06 55.8 63 41.3
arahy.Tifrunner.gnm1.ann1.B0Q1WP Arachis hypogaea HOM05D000018 ORTHO05D000187 2.7e-06 55.5 65 44.6
Duzib175G0011 Durio zibethinus HOM05D000018 ORTHO05D000187 3.6e-06 55.1 67 49.3
ECA248G2815 Erigeron canadensis HOM05D000018 ORTHO05D000187 3.6e-06 55.1 63 50.8
CAN.G541.5 Capsicum annuum HOM05D000018 ORTHO05D000187 4.7e-06 54.7 65 41.5
Nitab4.5_0003714g0120 Nicotiana tabacum HOM05D000018 ORTHO05D000593 4.7e-06 54.7 63 44.4
Haze_27773 Corylus avellana HOM05D000018 ORTHO05D000187 6.1e-06 54.3 63 42.9
Glyma.12G235300 Glycine max HOM05D000018 ORTHO05D000187 8.0e-06 53.9 66 40.9
PGSC0003DMG400007232 Solanum tuberosum HOM05D000018 ORTHO05D000187 8.0e-06 53.9 63 46.0


User provided reference genes

Program Settings