Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002679 Quercus lobata HOM05D041282 ORTHO05D029151 1.7e-72 275.8 132 100.0
QL04p000198 Quercus lobata HOM05D000038 ORTHO05D000143 4.7e-70 267.7 130 98.5
QL04p000166 Quercus lobata HOM05D041282 ORTHO05D029151 1.6e-49 199.5 106 90.6
QL04p003064 Quercus lobata HOM05D041282 ORTHO05D029151 5.7e-31 137.9 95 76.8
Haze_03261 Corylus avellana HOM05D000184 ORTHO05D029151 1.5e-23 113.2 106 56.6
TAR633G2361 Trochodendron aralioides HOM05D000184 ORTHO05D000032 2.9e-11 72.4 105 42.9
Aqoxy1G00166 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 3.8e-11 72.0 138 36.2
SalBow6G5076 Salvia bowleyana HOM05D000184 ORTHO05D000032 3.8e-11 72.0 101 43.6
SalBow6G5514 Salvia bowleyana HOM05D000184 ORTHO05D000032 3.8e-11 72.0 101 43.6
TAR623G0814 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.5e-11 71.2 132 37.9
Dinv14282 Davidia involucrata HOM05D000184 ORTHO05D000032 1.9e-10 69.7 113 39.8
Potri.006G191000 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.9e-10 69.7 76 47.4
Haze_19972 Corylus avellana HOM05D000184 ORTHO05D000032 2.5e-10 69.3 82 45.1
Manes.08G045400 Manihot esculenta HOM05D000184 ORTHO05D000032 2.5e-10 69.3 82 43.9
Aqoxy1G04112 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 3.2e-10 68.9 125 36.0
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 5.5e-10 68.2 122 36.1
CAN.G1161.25 Capsicum annuum HOM05D000184 ORTHO05D000032 7.2e-10 67.8 102 42.2
Nn2g15622 Nelumbo nucifera HOM05D000184 ORTHO05D000032 7.2e-10 67.8 138 34.8
RcHm_v2.0_Chr3g0480031 Rosa chinensis HOM05D000184 ORTHO05D000032 7.2e-10 67.8 109 39.4
Dinv43925 Davidia involucrata HOM05D000184 ORTHO05D000032 9.4e-10 67.4 90 40.0
Manes.09G033500 Manihot esculenta HOM05D000184 ORTHO05D000032 9.4e-10 67.4 124 34.7
Sopen10g029340 Solanum pennellii HOM05D000184 ORTHO05D000032 2.1e-09 66.2 102 43.1
PGSC0003DMG400011435 Solanum tuberosum HOM05D000184 ORTHO05D000032 2.1e-09 66.2 102 43.1
Nn7g36033 Nelumbo nucifera HOM05D000184 ORTHO05D000032 2.7e-09 65.9 146 34.9
Solyc10g078720.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 2.7e-09 65.9 102 43.1
arahy.Tifrunner.gnm1.ann1.T25X4W Arachis hypogaea HOM05D000184 ORTHO05D000032 3.6e-09 65.5 64 54.7
Nitab4.5_0004991g0030 Nicotiana tabacum HOM05D000184 ORTHO05D000032 3.6e-09 65.5 84 45.2
arahy.Tifrunner.gnm1.ann1.69RPC9 Arachis hypogaea HOM05D000184 ORTHO05D000032 6.1e-09 64.7 64 51.6
CSS0017966 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 6.1e-09 64.7 101 44.6
Sopen10g031000 Solanum pennellii HOM05D000184 ORTHO05D000032 6.1e-09 64.7 142 33.1
Solyc10g080460.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 8.0e-09 64.3 142 33.1
BcaB01g06003 Brassica carinata HOM05D000184 ORTHO05D000032 2.3e-08 62.8 48 56.2
Sabra06G0146300 Salix brachista HOM05D000184 ORTHO05D000032 3.0e-08 62.4 76 43.4
PGSC0003DMG400023674 Solanum tuberosum HOM05D000184 ORTHO05D000032 3.0e-08 62.4 144 32.6
Atru.chr8.1073 Acer truncatum HOM05D000184 ORTHO05D000032 4.0e-08 62.0 74 47.3
CAN.G128.36 Capsicum annuum HOM05D000184 ORTHO05D000032 4.0e-08 62.0 84 40.5
CiPaw.10G027300 Carya illinoinensis HOM05D000184 ORTHO05D000032 4.0e-08 62.0 114 38.6
Aqoxy1G03786 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 5.2e-08 61.6 136 31.6
Glyma.02G178100 Glycine max HOM05D000184 ORTHO05D000032 5.2e-08 61.6 142 35.9
Nitab4.5_0007123g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 5.2e-08 61.6 84 40.5
Aa31sc24G70 Aethionema arabicum HOM05D000184 ORTHO05D000032 6.7e-08 61.2 85 41.2
Ah.04g152380 Amaranthus hybridus HOM05D000184 ORTHO05D000032 6.7e-08 61.2 95 42.1
Gohir.A01G192250 Gossypium hirsutum HOM05D000184 ORTHO05D000032 6.7e-08 61.2 125 37.6
Gohir.D01G177700 Gossypium hirsutum HOM05D000184 ORTHO05D000032 6.7e-08 61.2 125 37.6
Gorai.002G225400 Gossypium raimondii HOM05D000184 ORTHO05D000032 6.7e-08 61.2 125 37.6
Medtr1g053835 Medicago truncatula HOM05D000184 ORTHO05D000032 6.7e-08 61.2 142 35.2
QL07p023341 Quercus lobata HOM05D000184 ORTHO05D000032 6.7e-08 61.2 114 36.8
Thecc.05G169800 Theobroma cacao HOM05D000184 ORTHO05D000032 6.7e-08 61.2 81 42.0
CSS0005408 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 8.8e-08 60.8 80 45.0
Peaxi162Scf00406g01119 Petunia axillaris HOM05D000184 ORTHO05D000032 8.8e-08 60.8 98 36.7
HanXRQChr01g0009621 Helianthus annuus HOM05D000184 ORTHO05D000032 1.2e-07 60.5 95 41.1
Lsat_1_v5_gn_5_164281 Lactuca sativa HOM05D000184 ORTHO05D000032 1.2e-07 60.5 107 39.3
Nitab4.5_0000016g0360 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.2e-07 60.5 70 50.0
Ciclev10033388m.g Citrus clementina HOM05D000184 ORTHO05D000032 1.5e-07 60.1 123 33.3
Potri.016G047900 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.5e-07 60.1 81 42.0
Prupe.7G075300 Prunus persica HOM05D000184 ORTHO05D000032 1.5e-07 60.1 110 37.3
Actinidia21572 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.0e-07 59.7 95 38.9
Ca_12088_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 2.0e-07 59.7 123 33.3
Oeu007773.1 Olea europaea HOM05D000184 ORTHO05D000032 2.0e-07 59.7 77 45.5
Actinidia40439 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.6e-07 59.3 42 61.9
Nitab4.5_0011083g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 3.3e-07 58.9 70 48.6
CANSAT64G0249 Cannabis sativa HOM05D000184 ORTHO05D000032 4.4e-07 58.5 40 65.0
Duzib128G0138 Durio zibethinus HOM05D000184 ORTHO05D000032 4.4e-07 58.5 124 34.7
MBI04_g32788_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 4.4e-07 58.5 79 44.3
PSO339G5823 Papaver somniferum HOM05D000184 ORTHO05D000032 4.4e-07 58.5 111 37.8
THA.LOC104799302 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 4.4e-07 58.5 43 62.8
arahy.Tifrunner.gnm1.ann1.019HRU Arachis hypogaea HOM05D000184 ORTHO05D000032 5.7e-07 58.2 136 30.9
Glyma.19G146600 Glycine max HOM05D000184 ORTHO05D000032 5.7e-07 58.2 112 33.9
Oeu019118.1 Olea europaea HOM05D000184 ORTHO05D000032 5.7e-07 58.2 113 36.3
Nitab4.5_0001538g0090 Nicotiana tabacum HOM05D000184 ORTHO05D000032 7.5e-07 57.8 51 56.9
Oeu061764.1 Olea europaea HOM05D000184 ORTHO05D000032 7.5e-07 57.8 156 33.3
Actinidia17266 Actinidia chinensis HOM05D000184 ORTHO05D000032 9.7e-07 57.4 106 33.0
Duzib093G1944 Durio zibethinus HOM05D000184 ORTHO05D000032 9.7e-07 57.4 156 30.1
FAN02G2304 Fragaria x ananassa HOM05D000184 ORTHO05D000032 9.7e-07 57.4 104 36.5
PSO384G0099 Papaver somniferum HOM05D000184 ORTHO05D000032 9.7e-07 57.4 111 36.9
TPR.G24148 Trifolium pratense HOM05D000184 ORTHO05D000032 9.7e-07 57.4 77 40.3
arahy.Tifrunner.gnm1.ann1.MI35X1 Arachis hypogaea HOM05D000184 ORTHO05D000032 1.3e-06 57.0 28 85.7
BcaB01g06021 Brassica carinata HOM05D000184 ORTHO05D000032 1.3e-06 57.0 50 52.0
A03p02890 Brassica napus HOM05D000184 ORTHO05D000032 1.3e-06 57.0 50 52.0
C03p03330 Brassica napus HOM05D000184 ORTHO05D000032 1.3e-06 57.0 50 52.0
BolC3t12876H Brassica oleracea HOM05D000184 ORTHO05D000032 1.3e-06 57.0 50 52.0
BraA03t09653Z Brassica rapa HOM05D000184 ORTHO05D000032 1.3e-06 57.0 50 52.0
Cpa.g.sc85.82 Carica papaya HOM05D000184 ORTHO05D000032 1.3e-06 57.0 116 29.3
Ciclev10012014m.g Citrus clementina HOM05D000184 ORTHO05D000032 1.3e-06 57.0 39 64.1
Hma1.2p1_0183F.1_g080780 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 1.3e-06 57.0 106 37.7
Lalb_Chr18g0047791 Lupinus albus HOM05D000184 ORTHO05D000032 1.3e-06 57.0 105 38.1
AL6G16910 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 1.7e-06 56.6 43 60.5
BcaB05g21644 Brassica carinata HOM05D000184 ORTHO05D000032 1.7e-06 56.6 44 59.1
Nitab4.5_0000105g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.7e-06 56.6 105 40.0
Psat6g121280 Pisum sativum HOM05D000184 ORTHO05D000032 1.7e-06 56.6 69 42.0
Actinidia22023 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.2e-06 56.2 42 59.5
Cc06_g16130 Coffea canephora HOM05D000184 ORTHO05D000032 2.2e-06 56.2 96 37.5
FvH4_6g22540 Fragaria vesca HOM05D000184 ORTHO05D000032 2.2e-06 56.2 104 36.5
FAN14G3489 Fragaria x ananassa HOM05D000184 ORTHO05D000032 2.2e-06 56.2 104 36.5
Potri.001G228500 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.2e-06 56.2 144 31.9
AUR62012048 Chenopodium quinoa HOM05D000184 ORTHO05D000032 2.8e-06 55.8 95 40.0
Thhalv10013850m.g Eutrema salsugineum HOM05D000184 ORTHO05D000032 2.8e-06 55.8 46 56.5
Lj1g0007211 Lotus japonicus HOM05D000184 ORTHO05D000032 2.8e-06 55.8 114 31.6
AUR62024316 Chenopodium quinoa HOM05D000184 ORTHO05D000032 3.7e-06 55.5 95 40.0
Glyma.03G143600 Glycine max HOM05D000184 ORTHO05D000032 3.7e-06 55.5 38 68.4
Lju124A29T43 Lonicera japonica HOM05D000184 ORTHO05D000032 3.7e-06 55.5 27 85.2
Psat0s238g0080 Pisum sativum HOM05D000184 ORTHO05D000032 3.7e-06 55.5 38 71.1
VMungo1383G2112 Vigna mungo HOM05D000184 ORTHO05D000032 3.7e-06 55.5 39 61.5
EL10Ac3g06934 Beta vulgaris HOM05D000184 ORTHO05D000032 4.8e-06 55.1 95 37.9
ECA248G2637 Erigeron canadensis HOM05D000184 ORTHO05D000032 4.8e-06 55.1 101 40.6
MD12G1058400 Malus domestica HOM05D000184 ORTHO05D000032 4.8e-06 55.1 27 85.2
Nitab4.5_0008908g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 4.8e-06 55.1 131 33.6
Sabra16G0136500 Salix brachista HOM05D000184 ORTHO05D000032 4.8e-06 55.1 108 36.1
VMungo0720G1481 Vigna mungo HOM05D000184 ORTHO05D000032 4.8e-06 55.1 101 34.7
CiPaw.09G031600 Carya illinoinensis HOM05D000184 ORTHO05D000032 6.3e-06 54.7 45 53.3
CsaV3_4G030620 Cucumis sativus L. HOM05D000184 ORTHO05D000032 6.3e-06 54.7 38 63.2
SalBow1G0267 Salvia bowleyana HOM05D000184 ORTHO05D000032 6.3e-06 54.7 30 73.3
SalBow1G8428 Salvia bowleyana HOM05D000184 ORTHO05D000032 6.3e-06 54.7 30 73.3
AT5G06800 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 8.2e-06 54.3 26 84.6
C02p02850 Brassica napus HOM05D000184 ORTHO05D000032 8.2e-06 54.3 26 84.6
BolC2t06250H Brassica oleracea HOM05D000184 ORTHO05D000032 8.2e-06 54.3 26 84.6
BraA02t04893Z Brassica rapa HOM05D000184 ORTHO05D000032 8.2e-06 54.3 26 84.6
Peaxi162Scf00258g00225 Petunia axillaris HOM05D000184 ORTHO05D000032 8.2e-06 54.3 39 59.0


User provided reference genes

Program Settings