Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002518 Quercus lobata HOM05D004867 ORTHO05D005729 1.1e-74 283.1 136 100.0
QL04p002463 Quercus lobata HOM05D004867 ORTHO05D005729 2.5e-42 175.6 105 81.9
QL04p002708 Quercus lobata HOM05D000038 ORTHO05D000143 2.5e-34 149.1 92 78.3
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 2.2e-25 119.4 78 70.5
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 3.7e-25 118.6 78 70.5
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 4.2e-21 105.1 78 61.5
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 9.4e-21 104.0 79 57.0
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 2.1e-20 102.8 78 60.3
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 1.0e-19 100.5 79 59.5
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 2.5e-18 95.9 80 57.5
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 4.3e-18 95.1 80 57.5
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 4.3e-18 95.1 80 57.5
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 4.3e-18 95.1 80 57.5
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 5.7e-18 94.7 105 48.6
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 6.3e-17 91.3 80 56.2
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 8.2e-17 90.9 75 56.0
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 8.2e-17 90.9 78 56.4
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 1.2e-15 87.0 75 53.3
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 1.5e-15 86.7 80 51.2
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 2.0e-15 86.3 74 58.1
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 2.0e-15 86.3 80 50.0
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 2.6e-15 85.9 78 48.7
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 5.9e-15 84.7 78 57.7
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 1.0e-14 84.0 81 50.6
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 1.3e-14 83.6 75 54.7
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 1.1e-13 80.5 83 44.6
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 1.1e-13 80.5 74 54.1
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.9e-13 79.7 73 50.7
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 2.5e-13 79.3 84 44.0
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 5.5e-13 78.2 83 47.0
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 7.2e-13 77.8 83 45.8
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 9.4e-13 77.4 75 48.0
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 1.2e-12 77.0 75 48.0
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 1.6e-12 76.6 80 50.0
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 4.7e-12 75.1 77 53.2
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 7.9e-12 74.3 85 45.9
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 1.0e-11 73.9 74 47.3
GSVIVG01031991001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.8e-11 73.2 76 50.0
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 3.9e-11 72.0 74 44.6
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 3.9e-11 72.0 74 50.0
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 5.1e-11 71.6 84 41.7
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 5.1e-11 71.6 75 45.3
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 6.7e-11 71.2 86 43.0
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 1.1e-10 70.5 76 43.4
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 1.1e-10 70.5 75 48.0
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 1.1e-10 70.5 79 41.8
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.1e-10 70.5 81 42.0
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 2.6e-10 69.3 81 45.7
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 2.6e-10 69.3 90 44.4
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 2.6e-10 69.3 76 48.7
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 3.3e-10 68.9 81 45.7
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 3.3e-10 68.9 81 45.7
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 3.3e-10 68.9 74 45.9
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 5.7e-10 68.2 90 44.4
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 7.4e-10 67.8 74 45.9
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 1.3e-09 67.0 86 41.9
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 1.3e-09 67.0 74 44.6
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 1.3e-09 67.0 74 44.6
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 2.8e-09 65.9 74 47.3
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 2.8e-09 65.9 79 41.8
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 2.8e-09 65.9 74 44.6
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 4.8e-09 65.1 85 41.2
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 6.3e-09 64.7 84 48.8
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 6.3e-09 64.7 74 43.2
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 3.1e-08 62.4 75 42.7
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 9.1e-08 60.8 77 40.3
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 1.5e-07 60.1 75 45.3
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 2.0e-07 59.7 75 42.7
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 2.0e-07 59.7 76 44.7
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 3.4e-07 58.9 79 39.2
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 5.9e-07 58.2 80 38.8


User provided reference genes

Program Settings