Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002463 Quercus lobata HOM05D004867 ORTHO05D005729 1.7e-54 215.7 105 100.0
QL04p002518 Quercus lobata HOM05D004867 ORTHO05D005729 2.0e-42 175.6 105 81.9
QL04p002708 Quercus lobata HOM05D000038 ORTHO05D000143 6.9e-40 167.2 92 90.2
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 3.3e-26 121.7 78 71.8
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 5.7e-26 120.9 78 71.8
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 5.9e-23 110.9 78 65.4
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 2.9e-22 108.6 78 64.1
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 2.9e-22 108.6 79 60.8
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 4.2e-21 104.8 88 59.1
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 5.5e-21 104.4 88 59.1
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 1.6e-20 102.8 79 62.0
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 3.6e-20 101.7 80 62.5
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 3.6e-20 101.7 80 62.5
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 6.1e-20 100.9 88 58.0
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 2.3e-19 99.0 80 60.0
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 8.8e-19 97.1 78 61.5
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 6.3e-17 90.9 87 48.3
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 1.1e-16 90.1 78 55.1
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 1.8e-16 89.4 75 53.3
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 9.1e-16 87.0 74 59.5
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 2.7e-15 85.5 80 50.0
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 2.7e-15 85.5 81 48.1
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 4.5e-15 84.7 81 49.4
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 4.5e-15 84.7 78 57.7
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 4.5e-15 84.7 73 53.4
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 1.7e-14 82.8 75 54.7
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 3.8e-14 81.6 78 52.6
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 5.0e-14 81.3 78 48.7
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 1.1e-13 80.1 78 50.0
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 1.9e-13 79.3 74 50.0
Duzib133G0042 Durio zibethinus HOM05D004867 ORTHO05D005729 1.9e-13 79.3 81 48.1
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 3.2e-13 78.6 80 50.0
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 3.2e-13 78.6 75 49.3
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 2.1e-12 75.9 85 44.7
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 3.6e-12 75.1 74 48.6
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 3.6e-12 75.1 73 47.9
Lalb_Chr25g0283491 Lupinus albus HOM05D004867 ORTHO05D005729 4.7e-12 74.7 78 46.2
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 4.7e-12 74.7 79 44.3
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 1.4e-11 73.2 74 54.1
GSVIVG01031991001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.4e-11 73.2 76 50.0
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 1.8e-11 72.8 76 46.1
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 2.3e-11 72.4 78 46.2
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 3.0e-11 72.0 74 48.6
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 3.0e-11 72.0 80 48.8
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 3.0e-11 72.0 86 43.0
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 5.2e-11 71.2 74 48.6
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 5.2e-11 71.2 81 48.1
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 6.8e-11 70.9 78 44.9
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 8.8e-11 70.5 81 48.1
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.2e-10 70.1 81 44.4
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 1.2e-10 70.1 78 42.3
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.5e-10 69.7 81 44.4
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 1.5e-10 69.7 81 44.4
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 2.6e-10 68.9 75 44.0
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 2.6e-10 68.9 74 47.3
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 2.6e-10 68.9 80 46.2
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 3.4e-10 68.6 74 43.2
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 5.7e-10 67.8 74 47.3
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 5.7e-10 67.8 87 43.7
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea HOM05D004867 ORTHO05D005729 9.8e-10 67.0 78 42.3
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 9.8e-10 67.0 74 45.9
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 1.3e-09 66.6 83 48.2
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 1.3e-09 66.6 87 43.7
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 2.2e-09 65.9 74 45.9
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 4.9e-09 64.7 74 44.6
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 8.3e-09 63.9 76 46.1
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 1.1e-08 63.5 80 43.8
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 1.1e-08 63.5 80 43.8
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 3.1e-08 62.0 74 47.3
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 4.1e-08 61.6 81 38.3
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 5.4e-08 61.2 76 46.1
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 2.0e-07 59.3 75 38.7
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 2.7e-07 58.9 76 44.7
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 3.5e-07 58.5 77 39.0
MELO3C023945.2 Cucumis melo HOM05D004867 ORTHO05D005729 2.3e-06 55.8 78 43.6
CsaV3_3G032420 Cucumis sativus L. HOM05D004867 ORTHO05D005729 6.6e-06 54.3 80 45.0


User provided reference genes

Program Settings