Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002317 Quercus lobata HOM05D013570 ORTHO05D000001 4.1e-76 288.1 161 100.0
QL04p002639 Quercus lobata HOM05D000038 ORTHO05D000143 8.2e-24 114.4 112 51.8
QL04p002877 Quercus lobata HOM05D000038 ORTHO05D000143 5.3e-23 111.7 111 50.5
QL04p002934 Quercus lobata HOM05D000038 ORTHO05D000143 1.2e-19 100.5 76 64.5
QL04p000198 Quercus lobata HOM05D000038 ORTHO05D000143 2.1e-19 99.8 113 48.7
QL04p002460 Quercus lobata HOM05D000038 ORTHO05D000143 2.0e-17 93.2 75 57.3
QL04p002708 Quercus lobata HOM05D000038 ORTHO05D000143 3.3e-17 92.4 75 57.3
QL04p002803 Quercus lobata HOM05D000038 ORTHO05D000143 9.7e-17 90.9 77 57.1
Cfa004472 Carpinus fangiana HOM05D000038 ORTHO05D000143 1.7e-16 90.1 76 56.6
Haze_10031 Corylus avellana HOM05D000038 ORTHO05D000143 4.8e-16 88.6 100 48.0
QL04p002442 Quercus lobata HOM05D000038 ORTHO05D000143 6.3e-16 88.2 103 49.5
QL04p002684 Quercus lobata HOM05D000038 ORTHO05D000143 8.2e-16 87.8 103 48.5
QL04p002809 Quercus lobata HOM05D000038 ORTHO05D000143 3.1e-15 85.9 75 54.7
Potri.001G228300 Populus trichocarpa HOM05D000038 ORTHO05D000143 6.9e-15 84.7 74 55.4
QL04p000143 Quercus lobata HOM05D000038 ORTHO05D000143 2.0e-14 83.2 67 61.2
QL04p000232 Quercus lobata HOM05D000038 ORTHO05D000143 5.9e-14 81.6 67 58.2
Sabra16G0136400 Salix brachista HOM05D000038 ORTHO05D000143 2.2e-13 79.7 75 54.7
Haze_10051 Corylus avellana HOM05D000038 ORTHO05D000143 2.9e-13 79.3 67 55.2
QL04p002720 Quercus lobata HOM05D000038 ORTHO05D000143 8.5e-13 77.8 50 62.0
Cfa004474 Carpinus fangiana HOM05D000038 ORTHO05D000143 2.5e-12 76.3 75 53.3
QL04p002953 Quercus lobata HOM05D000038 ORTHO05D000143 2.5e-12 76.3 65 55.4
QL04p002542 Quercus lobata HOM05D000038 ORTHO05D000143 1.2e-11 73.9 48 62.5
TWI73G0202 Tripterygium wilfordii HOM05D000038 ORTHO05D000143 6.1e-11 71.6 75 52.0
Manes.07G000900 Manihot esculenta HOM05D000038 ORTHO05D000143 8.8e-10 67.8 75 50.7
Actinidia15859 Actinidia chinensis HOM05D000038 ORTHO05D000143 2.0e-09 66.6 78 51.3
MSTRG.20612 Avicennia marina HOM05D000038 ORTHO05D000143 2.0e-09 66.6 77 53.2
QL04p000358 Quercus lobata HOM05D000038 ORTHO05D000143 2.2e-08 63.2 40 62.5
Aqoxy3G02334 Aquilegia oxysepala HOM05D000038 ORTHO05D000143 8.2e-08 61.2 74 39.2
Ciclev10030742m.g Citrus clementina HOM05D000038 ORTHO05D000143 8.2e-08 61.2 75 45.3
Aqoxy3G02333 Aquilegia oxysepala HOM05D000038 ORTHO05D000143 1.8e-07 60.1 74 41.9
QL01p029167 Quercus lobata HOM05D013570 ORTHO05D000001 1.2e-06 57.4 48 60.4
Atru.chr3.2458 Acer truncatum HOM05D000038 ORTHO05D000143 2.0e-06 56.6 74 36.5
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 2.6e-06 56.2 50 50.0
Os04g0202300 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000143 3.5e-06 55.8 74 43.2
QL04p019972 Quercus lobata HOM05D013570 ORTHO05D000001 3.5e-06 55.8 44 59.1
QL04p020087 Quercus lobata HOM05D013570 ORTHO05D000001 3.5e-06 55.8 44 59.1
QL04p020492 Quercus lobata HOM05D013570 ORTHO05D000001 3.5e-06 55.8 44 59.1
MD03G1022000 Malus domestica HOM05D000038 ORTHO05D000143 4.5e-06 55.5 74 35.1
QL04p020203 Quercus lobata HOM05D013570 ORTHO05D000001 4.5e-06 55.5 44 59.1
QL08p005220 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-06 55.5 57 49.1
Sed0022720 Sechium edule HOM05D000038 ORTHO05D000143 4.5e-06 55.5 78 39.7
Ciclev10014312m.g Citrus clementina HOM05D000038 ORTHO05D000143 5.9e-06 55.1 73 39.7
COL.COLO4_38441 Corchorus olitorius HOM05D000038 ORTHO05D000143 5.9e-06 55.1 74 35.1
MD03G1021800 Malus domestica HOM05D000038 ORTHO05D000143 7.7e-06 54.7 74 35.1
TAR324G0002 Trochodendron aralioides HOM05D000038 ORTHO05D000143 7.7e-06 54.7 74 35.1
TAR369G0305 Trochodendron aralioides HOM05D000038 ORTHO05D000143 7.7e-06 54.7 74 35.1


User provided reference genes

Program Settings