Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002203 Quercus lobata HOM05D001571 ORTHO05D005985 7.8e-51 203.4 94 100.0
QL04p002107 Quercus lobata HOM05D001571 ORTHO05D005985 1.5e-41 172.6 92 83.7
QL04p002100 Quercus lobata HOM05D001571 ORTHO05D005985 9.6e-41 169.9 92 83.7
QL01p001215 Quercus lobata HOM05D001571 ORTHO05D005985 2.8e-40 168.3 92 80.4
Duzib177G1010 Durio zibethinus HOM05D001571 ORTHO05D005985 7.6e-38 160.2 92 73.9
Sc11g0009330 Simmondsia chinensis HOM05D001571 ORTHO05D005985 9.9e-38 159.8 92 73.9
Haze_03282 Corylus avellana HOM05D001571 ORTHO05D005985 1.3e-37 159.5 92 76.1
Dinv43509 Davidia involucrata HOM05D001571 ORTHO05D005985 1.7e-37 159.1 92 76.1
CSS0017501 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D005985 2.9e-37 158.3 92 76.1
Cfa010693 Carpinus fangiana HOM05D001571 ORTHO05D005985 2.9e-37 158.3 92 76.1
CiPaw.14G094400 Carya illinoinensis HOM05D001571 ORTHO05D005985 2.9e-37 158.3 93 76.3
Eucgr.K02798 Eucalyptus grandis HOM05D001571 ORTHO05D005985 2.9e-37 158.3 92 73.9
Gorai.007G264000 Gossypium raimondii HOM05D001571 ORTHO05D005985 2.9e-37 158.3 92 76.1
Hma1.2p1_0462F.1_g157970 Hydrangea macrophylla HOM05D001571 ORTHO05D005985 6.4e-37 157.1 92 73.9
Gohir.A11G237200 Gossypium hirsutum HOM05D001571 ORTHO05D005985 8.4e-37 156.8 92 75.0
Thecc.05G252600 Theobroma cacao HOM05D001571 ORTHO05D005985 1.4e-36 156.0 93 76.3
EL10Ac2g04422 Beta vulgaris HOM05D001571 ORTHO05D005985 1.9e-36 155.6 92 71.7
CSS0049864 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D005985 1.9e-36 155.6 92 72.8
Ciclev10033772m.g Citrus clementina HOM05D001571 ORTHO05D005985 7.1e-36 153.7 93 73.1
Manes.10G153600 Manihot esculenta HOM05D001571 ORTHO05D005985 7.1e-36 153.7 93 74.2
Eucgr.K02799 Eucalyptus grandis HOM05D001571 ORTHO05D005985 9.3e-36 153.3 92 72.8
Duzib106G1030 Durio zibethinus HOM05D001571 ORTHO05D005985 1.6e-35 152.5 93 74.2
FvH4_5g39620 Fragaria vesca HOM05D001571 ORTHO05D005985 2.1e-35 152.1 93 73.1
FAN08G0235 Fragaria x ananassa HOM05D001571 ORTHO05D005985 2.1e-35 152.1 93 73.1
AUR62023051 Chenopodium quinoa HOM05D001571 ORTHO05D005985 2.7e-35 151.8 92 69.6
Rhsim07G0048800 Rhododendron simsii HOM05D001571 ORTHO05D005985 3.5e-35 151.4 92 71.7
CDE05G3587 Ceratophyllum demersum HOM05D001571 ORTHO05D005985 4.6e-35 151.0 100 69.0
TAR636G1355 Trochodendron aralioides HOM05D001571 ORTHO05D005985 4.6e-35 151.0 100 69.0
arahy.Tifrunner.gnm1.ann1.5S024H Arachis hypogaea HOM05D001571 ORTHO05D005985 6.0e-35 150.6 92 71.7
arahy.Tifrunner.gnm1.ann1.CV6EY6 Arachis hypogaea HOM05D001571 ORTHO05D005985 6.0e-35 150.6 92 71.7
CsaV3_3G032600 Cucumis sativus L. HOM05D001571 ORTHO05D005985 6.0e-35 150.6 92 68.5
FAN18G1426 Fragaria x ananassa HOM05D001571 ORTHO05D005985 6.0e-35 150.6 93 72.0
MBI04_g09717_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 6.0e-35 150.6 100 69.0
MSTRG.4994 Avicennia marina HOM05D001571 ORTHO05D005985 7.9e-35 150.2 92 69.6
AUR62009370 Chenopodium quinoa HOM05D001571 ORTHO05D005985 7.9e-35 150.2 92 68.5
DCAR_029577 Daucus carota HOM05D001571 ORTHO05D005985 1.0e-34 149.8 92 70.7
Sabra16G0139300 Salix brachista HOM05D001571 ORTHO05D005985 1.0e-34 149.8 93 74.2
VMungo1080G0519 Vigna mungo HOM05D001571 ORTHO05D005985 1.0e-34 149.8 92 70.7
Actinidia05834 Actinidia chinensis HOM05D001571 ORTHO05D005985 1.3e-34 149.4 92 70.7
MBI01_g29963_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 1.3e-34 149.4 100 66.0
Peaxi162Scf00402g00936 Petunia axillaris HOM05D001571 ORTHO05D005985 1.3e-34 149.4 92 67.4
Potri.001G232800 Populus trichocarpa HOM05D001571 ORTHO05D005985 1.3e-34 149.4 93 73.1
Prupe.2G001000 Prunus persica HOM05D001571 ORTHO05D005985 1.3e-34 149.4 92 69.6
RcHm_v2.0_Chr7g0241931 Rosa chinensis HOM05D001571 ORTHO05D005985 1.3e-34 149.4 92 69.6
Nitab4.5_0000468g0240 Nicotiana tabacum HOM05D001571 ORTHO05D005985 1.8e-34 149.1 92 68.5
Potri.001G232600 Populus trichocarpa HOM05D001571 ORTHO05D005985 1.8e-34 149.1 93 73.1
PGSC0003DMG400031128 Solanum tuberosum HOM05D001571 ORTHO05D005985 1.8e-34 149.1 92 68.5
MELO3C026977.2 Cucumis melo HOM05D001571 ORTHO05D005985 2.3e-34 148.7 92 67.4
Manes.09G118700 Manihot esculenta HOM05D001571 ORTHO05D005985 2.3e-34 148.7 93 74.2
Nitab4.5_0007494g0020 Nicotiana tabacum HOM05D001571 ORTHO05D005985 2.3e-34 148.7 92 68.5
Atru.chr11.2719 Acer truncatum HOM05D001571 ORTHO05D005985 3.0e-34 148.3 92 68.5
ClCG10G012760 Citrullus lanatus HOM05D001571 ORTHO05D005985 3.9e-34 147.9 92 68.5
TWI09G0458 Tripterygium wilfordii HOM05D001571 ORTHO05D005985 3.9e-34 147.9 99 67.7
vmacro22472 Vaccinium macrocarpon HOM05D001571 ORTHO05D005985 3.9e-34 147.9 92 67.4
CAN.G1361.13 Capsicum annuum HOM05D001571 ORTHO05D005985 5.1e-34 147.5 92 67.4
Hma1.2p1_0128F.1_g059950 Hydrangea macrophylla HOM05D001571 ORTHO05D005985 5.1e-34 147.5 92 68.5
Lj3g0011591 Lotus japonicus HOM05D001571 ORTHO05D005985 5.1e-34 147.5 91 68.1
SEGI_11659 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 5.1e-34 147.5 100 67.0
Glyma.08G161900 Glycine max HOM05D001571 ORTHO05D005985 6.7e-34 147.1 92 70.7
Oeu034888.1 Olea europaea HOM05D001571 ORTHO05D005985 6.7e-34 147.1 92 69.6
PGR044G1690 Punica granatum HOM05D001571 ORTHO05D005985 6.7e-34 147.1 92 67.4
Psat1g130120 Pisum sativum HOM05D001571 ORTHO05D005985 8.7e-34 146.7 92 68.5
SalBow5G2665 Salvia bowleyana HOM05D001571 ORTHO05D005985 8.7e-34 146.7 92 68.5
Cpa.g.sc197.26 Carica papaya HOM05D001571 ORTHO05D005985 1.1e-33 146.4 93 72.0
Solyc01g081610.3 Solanum lycopersicum HOM05D001571 ORTHO05D005985 1.1e-33 146.4 92 67.4
Sopen01g033160 Solanum pennellii HOM05D001571 ORTHO05D005985 1.1e-33 146.4 92 67.4
THA.LOC104826178 Tarenaya hassleriana HOM05D001571 ORTHO05D005985 1.1e-33 146.4 93 71.0
TAR633G2464 Trochodendron aralioides HOM05D001571 ORTHO05D005985 1.5e-33 146.0 100 66.0
VMungo1080G1153 Vigna mungo HOM05D001571 ORTHO05D005985 1.5e-33 146.0 92 69.6
Lj9A618T88 Lonicera japonica HOM05D001571 ORTHO05D005985 1.9e-33 145.6 92 66.3
SGA_v2.0_scaffold95G28760 Striga asiatica HOM05D001571 ORTHO05D005985 1.9e-33 145.6 91 65.9
Lsat_1_v5_gn_4_42140 Lactuca sativa HOM05D001571 ORTHO05D005985 2.5e-33 145.2 92 67.4
Lalb_Chr01g0015731 Lupinus albus HOM05D001571 ORTHO05D005985 2.5e-33 145.2 93 71.0
Phvul.005G045300 Phaseolus vulgaris HOM05D001571 ORTHO05D005985 2.5e-33 145.2 92 68.5
HanXRQChr11g0330961 Helianthus annuus HOM05D001571 ORTHO05D005985 3.3e-33 144.8 92 67.4
Ciclev10019509m.g Citrus clementina HOM05D001571 ORTHO05D005985 4.3e-33 144.4 93 68.8
Cc02_g26710 Coffea canephora HOM05D001571 ORTHO05D005985 4.3e-33 144.4 92 66.3
Phvul.005G043200 Phaseolus vulgaris HOM05D001571 ORTHO05D005985 4.3e-33 144.4 92 69.6
SEGI_19074 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 4.3e-33 144.4 100 66.0
SEGI_32337 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 4.3e-33 144.4 100 66.0
Ah.15g093150 Amaranthus hybridus HOM05D001571 ORTHO05D005985 5.6e-33 144.1 92 66.3
Cc02_g26730 Coffea canephora HOM05D001571 ORTHO05D005985 5.6e-33 144.1 92 67.4
Medtr2g062560 Medicago truncatula HOM05D001571 ORTHO05D005985 5.6e-33 144.1 92 67.4
Ca_22830_v3 Cicer arietinum L. HOM05D001571 ORTHO05D005985 7.4e-33 143.7 92 68.5
COL.COLO4_36049 Corchorus olitorius HOM05D001571 ORTHO05D005985 9.6e-33 143.3 93 68.8
QL05p001341 Quercus lobata HOM05D001571 ORTHO05D005985 9.6e-33 143.3 81 81.5
SalBow4G1289 Salvia bowleyana HOM05D001571 ORTHO05D005985 9.6e-33 143.3 92 65.2
Sed0012300 Sechium edule HOM05D001571 ORTHO05D005985 9.6e-33 143.3 92 65.2
Lalb_Chr20g0108241 Lupinus albus HOM05D001571 ORTHO05D005985 1.3e-32 142.9 92 67.4
Glyma.08G159500 Glycine max HOM05D001571 ORTHO05D005985 3.7e-32 141.4 92 68.5
HanXRQChr17g0564161 Helianthus annuus HOM05D001571 ORTHO05D005985 4.8e-32 141.0 92 66.3
ATR0737G027 Amborella trichopoda HOM05D001571 ORTHO05D005985 1.1e-31 139.8 91 68.1
Oeu024944.1 Olea europaea HOM05D001571 ORTHO05D005985 1.4e-31 139.4 92 65.2
QL04p000610 Quercus lobata HOM05D001571 ORTHO05D005985 1.4e-31 139.4 78 80.8
Zm00001eb325280 Zea mays HOM05D001571 ORTHO05D005985 1.4e-31 139.4 91 67.0
CANSAT11G1700 Cannabis sativa HOM05D001571 ORTHO05D005985 1.8e-31 139.0 92 68.5
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.8e-31 139.0 92 64.1
Migut.B01413 Erythranthe guttata HOM05D001571 ORTHO05D005985 1.8e-31 139.0 92 62.0
HPP92_026632 Vanilla planifolia HOM05D001571 ORTHO05D005985 1.8e-31 139.0 92 67.4
Aqoxy2G00553 Aquilegia oxysepala HOM05D001571 ORTHO05D005985 2.4e-31 138.7 92 68.5
SEGI_18608 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 2.4e-31 138.7 92 68.5
C08p51680 Brassica napus HOM05D001571 ORTHO05D005985 3.1e-31 138.3 93 66.7
BolC8t52696H Brassica oleracea HOM05D001571 ORTHO05D005985 3.1e-31 138.3 93 66.7
Cc02_g26740 Coffea canephora HOM05D001571 ORTHO05D005985 3.1e-31 138.3 92 63.0
HPP92_024828 Vanilla planifolia HOM05D001571 ORTHO05D005985 4.0e-31 137.9 92 66.3
Migut.N01651 Erythranthe guttata HOM05D001571 ORTHO05D005985 9.0e-31 136.7 92 64.1
MBI01_g43715_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 9.0e-31 136.7 94 61.7
Sp1g04440 Schrenkiella parvula HOM05D001571 ORTHO05D005985 9.0e-31 136.7 93 68.8
DCAR_015723 Daucus carota HOM05D001571 ORTHO05D005985 2.0e-30 135.6 93 64.5
unitig_578.g16703 Utricularia gibba HOM05D001571 ORTHO05D005985 2.0e-30 135.6 92 66.3
Pp3c18_15890 Physcomitrium patens HOM05D001571 ORTHO05D005985 2.6e-30 135.2 99 64.6
HPP92_012518 Vanilla planifolia HOM05D001571 ORTHO05D005985 2.6e-30 135.2 92 66.3
Aa31LG1G19050 Aethionema arabicum HOM05D001571 ORTHO05D005985 3.4e-30 134.8 94 64.9
Thhalv10007179m.g Eutrema salsugineum HOM05D001571 ORTHO05D005985 5.8e-30 134.0 93 66.7
Os07g0575500 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D005985 5.8e-30 134.0 91 63.7
Carub.0001s0492 Capsella rubella HOM05D001571 ORTHO05D005985 9.9e-30 133.3 93 66.7
Mapoly0130s0025 Marchantia polymorpha HOM05D001571 ORTHO05D005985 9.9e-30 133.3 99 62.6
Os03g0219400 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D005985 1.3e-29 132.9 100 60.0
Zm00001eb008880 Zea mays HOM05D001571 ORTHO05D005985 3.8e-29 131.3 100 61.0
BcaC07g42127 Brassica carinata HOM05D001571 ORTHO05D005985 1.4e-28 129.4 93 64.5
BraA09t42068Z Brassica rapa HOM05D001571 ORTHO05D005985 1.4e-28 129.4 93 63.4
AL1G15490 Arabidopsis lyrata HOM05D001571 ORTHO05D005985 3.2e-28 128.3 93 65.6
ATR0737G032 Amborella trichopoda HOM05D001571 ORTHO05D005985 5.5e-28 127.5 91 61.5
CARHR005090 Cardamine hirsuta HOM05D001571 ORTHO05D005985 5.5e-28 127.5 93 64.5
AT1G05590 Arabidopsis thaliana HOM05D001571 ORTHO05D005985 7.1e-28 127.1 93 64.5
SMO134G0264 Selaginella moellendorffii HOM05D001571 ORTHO05D005985 3.1e-23 111.7 106 50.9
Oeu020242.1 Olea europaea HOM05D001571 ORTHO05D005985 1.3e-21 106.3 92 54.3
MBI01_g43714_MAGBIO Magnolia biondii HOM05D001571 ORTHO05D005985 8.4e-21 103.6 100 50.0
BcaB04g18267 Brassica carinata HOM05D001571 ORTHO05D005985 2.0e-14 82.4 69 62.3
Ciclev10024601m.g Citrus clementina HOM05D001571 ORTHO05D005985 3.4e-14 81.6 52 63.5
Cfa025154 Carpinus fangiana HOM05D001571 ORTHO05D005985 3.8e-13 78.2 92 39.1
Dinv43950 Davidia involucrata HOM05D001571 ORTHO05D005985 5.1e-10 67.8 39 69.2
AagrBONN_evm.TU.Sc2ySwM_369.561 Anthoceros agrestis HOM05D001571 ORTHO05D002889 1.5e-06 56.2 53 47.2
VMungo0720G3180 Vigna mungo HOM05D001571 ORTHO05D002889 2.0e-06 55.8 54 46.3
Solyc11g008810.2 Solanum lycopersicum HOM05D001571 ORTHO05D002889 5.9e-06 54.3 55 45.5
Sopen11g004590 Solanum pennellii HOM05D001571 ORTHO05D002889 5.9e-06 54.3 55 45.5
PGSC0003DMG400016240 Solanum tuberosum HOM05D001571 ORTHO05D002889 5.9e-06 54.3 55 45.5


User provided reference genes

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