Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p002011 Quercus lobata HOM05D008109 ORTHO05D009894 1.1e-70 270.0 145 100.0
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 2.0e-29 132.9 151 62.9
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 1.2e-21 107.1 154 54.5
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 2.0e-21 106.3 152 55.9
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 2.1e-18 96.3 148 49.3
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 3.0e-17 92.4 159 49.1
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 6.7e-17 91.3 159 49.1
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 8.7e-17 90.9 160 45.0
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 8.7e-17 90.9 147 47.6
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.5e-16 90.1 160 47.5
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 5.7e-16 88.2 158 47.5
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 1.3e-15 87.0 160 45.0
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 1.6e-15 86.7 125 53.6
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 9.0e-14 80.9 158 41.1
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 3.4e-13 79.0 171 40.9
Cc02_g26780 Coffea canephora HOM05D008109 ORTHO05D009894 5.9e-13 78.2 132 47.7
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 7.7e-13 77.8 151 45.0
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 1.0e-12 77.4 122 48.4
Cc02_g26790 Coffea canephora HOM05D008109 ORTHO05D009894 1.3e-12 77.0 137 45.3
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 3.8e-12 75.5 159 38.4
PGSC0003DMG400015658 Solanum tuberosum HOM05D008109 ORTHO05D009894 5.0e-12 75.1 134 43.3
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 6.5e-12 74.7 167 41.9
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 8.5e-12 74.3 167 41.9
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 8.5e-12 74.3 163 39.9
Prupe.2G001600 Prunus persica HOM05D008109 ORTHO05D009894 1.4e-11 73.6 172 41.9
Nitab4.5_0004375g0040 Nicotiana tabacum HOM05D008109 ORTHO05D009894 5.5e-11 71.6 136 43.4
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 9.4e-11 70.9 149 43.0
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 1.2e-10 70.5 174 37.9
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 2.7e-10 69.3 176 40.9
Nitab4.5_0000266g0110 Nicotiana tabacum HOM05D008109 ORTHO05D009894 2.7e-10 69.3 120 49.2
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 2.7e-10 69.3 167 40.7
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 4.6e-10 68.6 151 43.7
Lsat_1_v5_gn_1_89920 Lactuca sativa HOM05D008109 ORTHO05D009894 4.6e-10 68.6 143 41.3
CAN.G103.18 Capsicum annuum HOM05D008109 ORTHO05D009894 1.4e-09 67.0 122 44.3
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 1.4e-09 67.0 186 39.8
Rhsim07G0049100 Rhododendron simsii HOM05D008109 ORTHO05D009894 2.3e-09 66.2 112 48.2
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 3.0e-09 65.9 174 33.9
Lj3g0014063 Lotus japonicus HOM05D008109 ORTHO05D009894 3.9e-09 65.5 172 36.6
DCAR_029584 Daucus carota HOM05D008109 ORTHO05D009894 5.1e-09 65.1 145 38.6
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 6.7e-09 64.7 178 38.8
Glyma.08G158700 Glycine max HOM05D008109 ORTHO05D009894 6.7e-09 64.7 196 33.2
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 6.7e-09 64.7 151 42.4
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 8.8e-09 64.3 152 43.4
Oeu032778.1 Olea europaea HOM05D008109 ORTHO05D009894 1.1e-08 63.9 139 36.7
MSTRG.28106 Avicennia marina HOM05D008109 ORTHO05D009894 2.5e-08 62.8 125 37.6
Nitab4.5_0003123g0020 Nicotiana tabacum HOM05D008109 ORTHO05D009894 2.5e-08 62.8 118 40.7
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 2.5e-08 62.8 178 38.2
Solyc06g051220.1 Solanum lycopersicum HOM05D008109 ORTHO05D009894 2.5e-08 62.8 128 41.4
Peaxi162Scf01343g00014 Petunia axillaris HOM05D008109 ORTHO05D009894 4.3e-08 62.0 128 43.0
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 9.7e-08 60.8 157 39.5
Glyma.15G267600 Glycine max HOM05D008109 ORTHO05D009894 9.7e-08 60.8 117 41.0
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 2.2e-07 59.7 157 36.3
AUR62031557 Chenopodium quinoa HOM05D008109 ORTHO05D009894 2.8e-07 59.3 143 39.9
AUR62012433 Chenopodium quinoa HOM05D008109 ORTHO05D009894 3.7e-07 58.9 143 39.9
Oeu024942.1 Olea europaea HOM05D008109 ORTHO05D009894 6.3e-07 58.2 138 37.0
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 1.4e-06 57.0 68 64.7
A05p13660 Brassica napus HOM05D011216 ORTHO05D009894 4.1e-06 55.5 138 37.0
BraA05t20304Z Brassica rapa HOM05D011216 ORTHO05D009894 4.1e-06 55.5 138 37.0
Thhalv10017383m.g Eutrema salsugineum HOM05D011216 ORTHO05D009894 4.1e-06 55.5 138 34.8
Nitab4.5_0000050g0160 Nicotiana tabacum HOM05D008109 ORTHO05D009894 5.3e-06 55.1 94 43.6
AL4G27230 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 6.9e-06 54.7 141 34.8
AL80U10010 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 6.9e-06 54.7 141 34.8
Sc06g0000510 Simmondsia chinensis HOM05D008109 ORTHO05D009894 6.9e-06 54.7 139 35.3


User provided reference genes

Program Settings