Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 2.0e-60 235.7 134 100.0
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 1.4e-56 223.0 134 97.0
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 7.3e-18 94.4 132 49.2
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 3.6e-17 92.0 135 47.4
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 4.0e-16 88.6 93 58.1
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 4.4e-15 85.1 90 53.3
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 1.7e-14 83.2 99 47.5
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 3.2e-13 79.0 95 48.4
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 4.1e-13 78.6 140 44.3
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 5.4e-13 78.2 83 55.4
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 7.1e-13 77.8 101 44.6
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 2.1e-12 76.3 95 45.3
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 2.7e-12 75.9 95 47.4
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 6.0e-12 74.7 81 49.4
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 6.0e-12 74.7 139 42.4
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 1.0e-11 73.9 88 55.7
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.3e-11 73.6 116 44.0
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.7e-11 73.2 116 44.0
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 3.0e-11 72.4 115 42.6
Sed0026701 Sechium edule HOM05D008423 ORTHO05D010599 3.0e-11 72.4 105 44.8
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 3.9e-11 72.0 97 48.5
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 3.9e-11 72.0 97 48.5
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 3.9e-11 72.0 83 53.0
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 1.1e-10 70.5 83 50.6
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 1.5e-10 70.1 71 54.9
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 1.5e-10 70.1 140 39.3
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 4.3e-10 68.6 91 46.2
CsaV3_7G031470 Cucumis sativus L. HOM05D008423 ORTHO05D010599 7.3e-10 67.8 96 44.8
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 2.8e-09 65.9 82 53.7
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 4.7e-09 65.1 134 38.8
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 1.1e-08 63.9 94 42.6
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 1.1e-08 63.9 99 39.4
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 1.4e-08 63.5 84 40.5
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 1.4e-08 63.5 84 40.5
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 1.8e-08 63.2 131 34.4
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 2.4e-08 62.8 131 40.5
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 8.9e-08 60.8 79 40.5
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 1.2e-07 60.5 111 34.2
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 1.5e-07 60.1 137 39.4
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 2.6e-07 59.3 81 44.4
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 3.4e-07 58.9 133 37.6
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 3.4e-07 58.9 92 43.5
FAN01G2867 Fragaria x ananassa HOM05D008423 ORTHO05D010599 4.4e-07 58.5 96 43.8
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 1.3e-06 57.0 83 49.4
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 1.3e-06 57.0 101 40.6
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 2.2e-06 56.2 89 40.4
FAN10G1262 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.9e-06 55.8 88 45.5
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 4.9e-06 55.1 121 35.5


User provided reference genes

Program Settings