Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 7.2e-63 243.8 130 100.0
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 8.3e-59 230.3 154 84.4
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.7e-51 206.1 130 86.2
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.8e-50 202.6 130 84.6
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.9e-48 194.9 131 83.2
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 6.6e-48 194.1 129 80.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.6e-47 191.0 128 80.5
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 5.6e-47 191.0 130 78.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.2e-46 189.9 130 78.5
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.1e-46 189.1 124 81.5
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 2.8e-46 188.7 121 83.5
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 2.8e-46 188.7 119 83.2
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 3.6e-46 188.3 123 82.1
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 8.0e-46 187.2 120 83.3
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.0e-45 186.8 117 85.5
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.4e-45 186.4 117 83.8
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.3e-45 185.7 115 86.1
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 2.3e-45 185.7 117 84.6
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 3.1e-45 185.3 119 84.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 4.0e-45 184.9 117 83.8
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 4.0e-45 184.9 109 90.8
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 4.0e-45 184.9 129 76.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 6.8e-45 184.1 130 75.4
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 6.8e-45 184.1 130 75.4
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.2e-44 183.3 129 77.5
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.2e-44 183.3 129 75.2
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.5e-44 183.0 117 82.9
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 2.6e-44 182.2 120 80.0
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 2.6e-44 182.2 127 78.0
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 4.4e-44 181.4 129 75.2
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 7.5e-44 180.6 120 78.3
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 7.5e-44 180.6 137 73.0
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.3e-43 179.9 129 76.0
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.3e-43 179.9 120 78.3
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.3e-43 179.9 129 73.6
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.2e-43 179.1 129 77.5
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 2.2e-43 179.1 129 74.4
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.2e-43 179.1 120 80.8
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 2.9e-43 178.7 117 82.1
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.4e-43 177.6 119 78.2
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 8.3e-43 177.2 129 74.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.1e-42 176.8 138 73.2
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 1.9e-42 176.0 116 81.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 1.9e-42 176.0 116 81.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 1.9e-42 176.0 116 81.9
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 1.9e-42 176.0 127 74.8
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.4e-42 175.6 111 84.7
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 2.4e-42 175.6 121 79.3
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.2e-42 175.3 120 82.5
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 4.1e-42 174.9 116 81.0
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 4.1e-42 174.9 116 81.0
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 4.1e-42 174.9 130 76.9
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.7e-41 172.2 120 80.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 2.7e-41 172.2 120 80.0
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 4.6e-41 171.4 110 83.6
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 6.0e-41 171.0 120 75.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 6.0e-41 171.0 120 75.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 7.8e-41 170.6 121 74.4
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.3e-40 169.9 125 76.0
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.3e-40 169.9 137 70.1
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.7e-40 169.5 115 80.0
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 3.9e-40 168.3 147 65.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 3.9e-40 168.3 130 70.0
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 8.6e-40 167.2 115 79.1
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.1e-39 166.8 131 74.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.5e-39 165.6 130 71.5
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.5e-39 165.6 134 66.4
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.5e-39 165.6 134 66.4
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 2.5e-39 165.6 130 69.2
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 7.3e-39 164.1 123 76.4
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.1e-38 162.5 137 67.9
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.1e-38 162.5 137 67.9
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 2.8e-38 162.2 114 76.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 2.8e-38 162.2 123 74.0
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.8e-37 159.5 114 75.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 4.0e-37 158.3 124 72.6
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 5.2e-37 157.9 172 57.0
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 6.8e-37 157.5 126 68.3
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.8e-37 157.5 113 76.1
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 6.8e-37 157.5 114 75.4
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 2.6e-36 155.6 119 69.7
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.4e-36 155.2 113 75.2
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 9.8e-36 153.7 113 72.6
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 3.7e-35 151.8 126 68.3
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.4e-35 151.0 100 79.0
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.6e-33 146.4 129 62.8
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 4.6e-33 144.8 127 63.8
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 6.0e-33 144.4 118 63.6
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.3e-32 142.5 115 69.6
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.1e-31 140.2 102 71.6
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 4.3e-31 138.3 133 63.9
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 4.3e-31 138.3 136 61.0
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.4e-29 133.3 111 68.5
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.3e-29 132.5 120 68.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.8e-29 131.0 113 65.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.7e-27 125.2 114 61.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.4e-26 121.3 88 75.0
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 6.0e-25 117.9 99 65.7
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.8e-25 117.5 110 61.8
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.8e-25 117.5 109 62.4
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 6.4e-19 97.8 72 69.4
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 5.4e-18 94.7 95 60.0
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.6e-17 93.2 113 45.1
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.9e-15 86.3 66 65.2
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-15 85.5 102 43.1
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 6.2e-14 81.3 51 84.3
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 5.3e-13 78.2 108 42.6
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 1.3e-08 63.5 54 57.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 5.1e-08 61.6 52 63.5


User provided reference genes

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