Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 2.6e-72 275.4 152 100.0
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 3.1e-57 225.3 134 97.0
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 3.7e-18 95.5 96 60.4
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 3.5e-16 89.0 133 47.4
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 1.0e-15 87.4 93 57.0
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 1.1e-14 84.0 90 52.2
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 1.5e-14 83.6 99 47.5
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 2.8e-13 79.3 95 48.4
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 6.1e-13 78.2 83 55.4
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 1.8e-12 76.6 95 45.3
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 1.8e-12 76.6 139 42.4
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 3.0e-12 75.9 95 47.4
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 5.2e-12 75.1 120 43.3
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 5.2e-12 75.1 136 43.4
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 6.8e-12 74.7 120 43.3
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 8.9e-12 74.3 88 55.7
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 1.2e-11 73.9 129 39.5
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 2.0e-11 73.2 81 48.1
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 2.6e-11 72.8 115 42.6
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.6e-11 72.8 120 42.5
Sed0026701 Sechium edule HOM05D008423 ORTHO05D010599 3.4e-11 72.4 105 44.8
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 4.4e-11 72.0 71 56.3
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 4.4e-11 72.0 120 42.5
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 9.8e-11 70.9 91 47.3
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 1.3e-10 70.5 83 51.8
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 1.3e-10 70.5 138 39.1
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 2.2e-10 69.7 83 48.2
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 3.7e-10 68.9 83 49.4
CsaV3_7G031470 Cucumis sativus L. HOM05D008423 ORTHO05D010599 8.3e-10 67.8 96 44.8
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 8.3e-10 67.8 129 41.9
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 4.1e-09 65.5 120 35.0
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 4.1e-09 65.5 120 35.0
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 9.2e-09 64.3 94 42.6
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 1.2e-08 63.9 141 38.3
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 1.2e-08 63.9 75 52.0
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 1.6e-08 63.5 130 41.5
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 2.0e-08 63.2 129 34.1
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 3.5e-08 62.4 129 37.2
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 1.3e-07 60.5 79 40.5
FAN01G2867 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.7e-07 60.1 100 43.0
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 3.0e-07 59.3 92 43.5
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 3.9e-07 58.9 133 33.1
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 8.6e-07 57.8 81 43.2
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 1.1e-06 57.4 101 40.6
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 1.5e-06 57.0 83 49.4
FAN10G1262 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.9e-06 56.6 111 39.6
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 1.9e-06 56.6 89 40.4
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 2.5e-06 56.2 89 40.4
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 2.5e-06 56.2 84 46.4


User provided reference genes

Program Settings