Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 7.4e-200 700.3 339 100.0
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 2.1e-194 682.2 341 97.4
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 6.5e-188 660.6 341 95.6
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 5.5e-147 524.6 344 74.4
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.5e-144 516.5 326 76.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.5e-144 516.5 326 76.1
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 4.4e-144 515.0 344 73.5
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.3e-143 513.5 355 72.1
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 2.5e-139 499.2 359 68.0
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 3.0e-137 492.3 345 69.0
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.1e-131 473.8 343 65.0
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-131 473.4 346 65.9
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.5e-131 473.4 340 68.5
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.9e-131 473.0 350 66.6
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 8.0e-130 467.6 364 63.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 8.0e-130 467.6 350 66.6
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.3e-129 466.1 350 66.0
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 3.0e-129 465.7 349 65.0
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 6.8e-129 464.5 350 65.4
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 8.9e-129 464.2 350 65.7
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.4e-128 462.2 345 64.9
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 9.8e-128 460.7 323 67.8
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.3e-127 460.3 346 65.9
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 8.3e-127 457.6 345 64.6
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.4e-126 456.8 350 65.1
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.1e-126 455.3 345 65.2
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 5.4e-126 454.9 353 64.3
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 9.2e-126 454.1 322 67.7
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 2.7e-125 452.6 353 63.2
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.7e-125 452.6 350 64.9
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.7e-125 452.6 346 63.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 3.5e-125 452.2 324 67.6
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.6e-125 451.8 346 65.0
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 4.6e-125 451.8 347 64.6
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 7.8e-125 451.1 350 64.6
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.3e-124 450.3 343 63.3
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 3.0e-124 449.1 343 63.0
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 3.9e-124 448.7 345 65.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.1e-123 447.2 345 64.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.9e-123 446.4 341 63.3
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 2.1e-122 443.0 345 64.1
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 2.1e-122 443.0 344 61.9
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.8e-122 442.6 343 63.6
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 8.0e-122 441.0 344 61.9
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.3e-121 439.5 345 62.0
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 4.0e-121 438.7 344 61.6
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.8e-121 438.0 362 60.5
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 8.9e-121 437.6 346 62.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 8.9e-121 437.6 345 62.0
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.2e-120 437.2 346 62.4
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.2e-120 437.2 321 66.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.7e-119 433.3 347 62.2
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 2.2e-119 433.0 340 62.1
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 4.9e-119 431.8 343 61.5
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.4e-118 430.3 345 63.5
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.4e-118 429.5 275 73.8
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 9.2e-118 427.6 348 59.2
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 2.7e-117 426.0 349 58.5
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.6e-117 425.2 311 68.2
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.3e-116 423.7 340 61.2
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 3.9e-116 422.2 344 59.6
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 5.0e-116 421.8 339 61.4
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 5.0e-116 421.8 349 62.2
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 8.6e-116 421.0 334 63.5
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.3e-115 418.7 344 60.5
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 5.6e-115 418.3 349 57.3
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.7e-114 415.2 339 62.2
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 6.2e-114 414.8 328 61.6
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 6.2e-114 414.8 320 62.5
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 8.1e-114 414.5 366 54.6
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 4.9e-111 405.2 349 55.0
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 6.4e-111 404.8 349 55.0
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.9e-110 403.3 349 54.2
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.7e-109 399.4 340 61.2
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 3.5e-109 399.1 349 55.0
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.3e-108 397.1 380 53.2
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 8.6e-108 394.4 343 58.3
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 4.0e-105 385.6 339 58.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.6e-104 382.9 348 54.0
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 5.8e-104 381.7 346 53.2
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 5.8e-104 381.7 346 53.2
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 7.6e-104 381.3 348 53.7
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 5.4e-102 375.2 324 60.2
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 5.1e-100 368.6 340 54.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 5.1e-100 368.6 370 49.7
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 2.5e-99 366.3 272 68.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 8.4e-95 351.3 309 59.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 3.2e-94 349.4 334 53.6
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.2e-93 347.4 250 68.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.2e-93 347.4 250 68.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.8e-93 344.7 251 66.1
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.6e-90 337.0 334 52.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.7e-87 327.0 338 51.5
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.9e-87 326.2 340 52.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 3.9e-84 315.8 349 50.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 5.1e-84 315.5 241 62.7
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.8e-81 307.0 350 49.4
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 9.9e-80 301.2 300 55.0
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.9e-78 297.0 190 75.3
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.5e-78 296.6 263 55.9
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.5e-75 287.3 261 55.6
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.6e-72 276.6 239 56.1
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.8e-71 272.7 215 64.7
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.4e-65 253.4 243 56.4
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 6.9e-65 251.9 184 60.9
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 5.5e-62 242.3 308 45.5
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.4e-57 226.9 352 39.2
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.8e-49 200.7 131 66.4
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-37 161.4 100 75.0
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 2.1e-37 160.6 130 56.9
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.2e-32 144.8 322 32.6
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.2e-29 134.8 144 47.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 3.7e-26 123.2 219 34.7
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.0e-19 100.9 73 60.3
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-17 95.1 103 50.5
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 4.0e-12 76.6 104 38.5
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 7.5e-11 72.4 83 54.2


User provided reference genes

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