Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p071021 Quercus lobata HOM05D003853 ORTHO05D004171 2.5e-74 282.3 179 100.0
QL03p070993 Quercus lobata HOM05D003853 ORTHO05D004171 7.9e-36 154.5 169 64.5
QL03p071009 Quercus lobata HOM05D003853 ORTHO05D004171 1.4e-35 153.7 164 71.3
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 1.4e-27 127.1 166 50.0
Cfa008902 Carpinus fangiana HOM05D003853 ORTHO05D004171 8.8e-27 124.4 155 56.1
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 2.0e-26 123.2 146 64.4
Eucgr.B03178 Eucalyptus grandis HOM05D003853 ORTHO05D004171 9.7e-26 120.9 144 66.0
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 1.7e-25 120.2 152 59.9
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 2.4e-24 116.3 164 59.8
QL03p070977 Quercus lobata HOM05D003853 ORTHO05D004171 1.2e-23 114.0 184 59.2
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 2.9e-22 109.4 162 56.8
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 3.2e-21 105.9 128 52.3
Potri.008G093200 Populus trichocarpa HOM05D003853 ORTHO05D004171 4.7e-20 102.1 127 49.6
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 6.1e-20 101.7 176 43.8
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 6.1e-20 101.7 151 57.0
Sc04g0007740 Simmondsia chinensis HOM05D003853 ORTHO05D004171 1.4e-19 100.5 149 40.9
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 1.8e-19 100.1 158 51.3
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 3.0e-19 99.4 128 50.8
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 4.0e-19 99.0 88 62.5
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 4.0e-19 99.0 88 62.5
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 4.0e-19 99.0 135 53.3
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 5.2e-19 98.6 104 52.9
Sp2g14360 Schrenkiella parvula HOM05D003853 ORTHO05D004171 6.8e-19 98.2 178 51.7
Thhalv10004968m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 1.2e-18 97.4 185 47.0
AT2G03440 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 2.0e-18 96.7 129 57.4
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 2.0e-18 96.7 163 49.1
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.6e-18 96.3 144 54.2
SGA_v2.0_scaffold16G07759 Striga asiatica HOM05D003853 ORTHO05D004171 3.4e-18 95.9 175 41.7
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 4.4e-18 95.5 128 44.5
BcaB07g30301 Brassica carinata HOM05D003853 ORTHO05D004171 4.4e-18 95.5 171 48.0
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 4.4e-18 95.5 127 46.5
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 9.8e-18 94.4 127 49.6
MSTRG.7763 Avicennia marina HOM05D003853 ORTHO05D004171 1.3e-17 94.0 179 38.5
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 1.3e-17 94.0 129 51.9
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 2.8e-17 92.8 129 47.3
Sopen04g001500 Solanum pennellii HOM05D003853 ORTHO05D004171 2.8e-17 92.8 162 39.5
Solyc04g005480.1 Solanum lycopersicum HOM05D003853 ORTHO05D004171 3.7e-17 92.4 153 39.9
Sabra08G0070000 Salix brachista HOM05D003853 ORTHO05D004171 4.8e-17 92.0 127 46.5
BcaC03g17214 Brassica carinata HOM05D003853 ORTHO05D004171 1.1e-16 90.9 173 48.0
BolC2t11232H Brassica oleracea HOM05D003853 ORTHO05D004171 1.1e-16 90.9 173 48.0
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.1e-16 90.9 156 42.3
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.8e-16 90.1 154 50.6
Rhsim03G0019300 Rhododendron simsii HOM05D003853 ORTHO05D004171 1.8e-16 90.1 155 46.5
BcaC06g31183 Brassica carinata HOM05D003853 ORTHO05D004171 2.4e-16 89.7 182 40.1
BcaC06g33998 Brassica carinata HOM05D003853 ORTHO05D004171 2.4e-16 89.7 182 41.8
C07p33870 Brassica napus HOM05D003853 ORTHO05D004171 2.4e-16 89.7 182 41.8
BolC7t43901H Brassica oleracea HOM05D003853 ORTHO05D004171 2.4e-16 89.7 182 41.8
BraA02t08366Z Brassica rapa HOM05D003853 ORTHO05D004171 2.4e-16 89.7 171 43.9
BraA06t27202Z Brassica rapa HOM05D003853 ORTHO05D004171 2.4e-16 89.7 182 42.3
COL.COLO4_27926 Corchorus olitorius HOM05D003853 ORTHO05D004171 4.1e-16 89.0 134 45.5
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 4.1e-16 89.0 128 45.3
Carub.0005s0241 Capsella rubella HOM05D003853 ORTHO05D004171 5.4e-16 88.6 188 46.3
PGSC0003DMG400035643 Solanum tuberosum HOM05D003853 ORTHO05D004171 5.4e-16 88.6 154 38.3
C02p51440 Brassica napus HOM05D003853 ORTHO05D004171 7.0e-16 88.2 178 46.6
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 7.0e-16 88.2 128 45.3
AL5G13190 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 9.1e-16 87.8 181 43.1
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 1.2e-15 87.4 128 44.5
A06p43140 Brassica napus HOM05D003853 ORTHO05D004171 1.6e-15 87.0 182 41.8
CARHR014300 Cardamine hirsuta HOM05D003853 ORTHO05D004171 1.6e-15 87.0 113 49.6
Sed0005785 Sechium edule HOM05D003853 ORTHO05D004171 1.6e-15 87.0 174 42.5
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 2.0e-15 86.7 69 59.4
Cpa.g.sc1.96 Carica papaya HOM05D003853 ORTHO05D004171 2.0e-15 86.7 119 46.2
A02p33450 Brassica napus HOM05D003853 ORTHO05D004171 3.5e-15 85.9 178 43.8
BcaB03g13120 Brassica carinata HOM05D003853 ORTHO05D004171 4.5e-15 85.5 167 47.3
Potri.010G161200 Populus trichocarpa HOM05D003853 ORTHO05D004171 4.5e-15 85.5 128 45.3
AL1G25770 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 5.9e-15 85.1 167 43.1
Sabra10G0122600 Salix brachista HOM05D003853 ORTHO05D004171 5.9e-15 85.1 128 45.3
Sabra10G0122700 Salix brachista HOM05D003853 ORTHO05D004171 5.9e-15 85.1 128 45.3
Sp1g12030 Schrenkiella parvula HOM05D003853 ORTHO05D004171 7.7e-15 84.7 165 38.8
Aa31LG4G16180 Aethionema arabicum HOM05D003853 ORTHO05D004171 1.0e-14 84.3 111 48.6
BolC8t49263H Brassica oleracea HOM05D003853 ORTHO05D004171 1.0e-14 84.3 167 47.9
AUR62007952 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.0e-14 84.3 66 62.1
Carub.0001s1363 Capsella rubella HOM05D003853 ORTHO05D004171 1.3e-14 84.0 114 47.4
MBI16_g00500_MAGBIO Magnolia biondii HOM05D003853 ORTHO05D004171 1.3e-14 84.0 95 50.5
BcaC07g38709 Brassica carinata HOM05D003853 ORTHO05D004171 1.7e-14 83.6 113 47.8
C08p16390 Brassica napus HOM05D003853 ORTHO05D004171 1.7e-14 83.6 113 47.8
AT1G13930 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 2.2e-14 83.2 113 46.0
CARHR145780 Cardamine hirsuta HOM05D003853 ORTHO05D004171 5.0e-14 82.0 186 39.2
CSS0028215 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 8.5e-14 81.3 101 60.4
vmacro22355 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 8.5e-14 81.3 117 46.2
Thhalv10008975m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 1.1e-13 80.9 166 43.4
BcaB03g13123 Brassica carinata HOM05D003853 ORTHO05D004171 1.5e-13 80.5 113 48.7
Nitab4.5_0015741g0010 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.5e-13 80.5 112 47.3
Phvul.002G168000 Phaseolus vulgaris HOM05D003853 ORTHO05D004171 1.5e-13 80.5 71 60.6
MELO3C012136.2 Cucumis melo HOM05D003853 ORTHO05D004171 1.9e-13 80.1 113 46.9
Cc11_g12330 Coffea canephora HOM05D003853 ORTHO05D004171 2.5e-13 79.7 158 51.9
AUR62003132 Chenopodium quinoa HOM05D003853 ORTHO05D004171 3.2e-13 79.3 72 56.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.2e-13 79.0 183 43.2
Peaxi162Scf00930g00051 Petunia axillaris HOM05D003853 ORTHO05D004171 4.2e-13 79.0 118 55.9
Sopen05g007410 Solanum pennellii HOM05D003853 ORTHO05D004171 4.2e-13 79.0 109 45.9
Ah.03g139140 Amaranthus hybridus HOM05D003853 ORTHO05D004171 5.5e-13 78.6 80 57.5
BraA08t35142Z Brassica rapa HOM05D003853 ORTHO05D004171 5.5e-13 78.6 168 46.4
CsaV3_5G033160 Cucumis sativus L. HOM05D003853 ORTHO05D004171 7.2e-13 78.2 177 36.2
CDE02G2907 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 9.4e-13 77.8 75 54.7
ClCG05G023860 Citrullus lanatus HOM05D003853 ORTHO05D004171 1.2e-12 77.4 146 37.7
BcaC07g38710 Brassica carinata HOM05D003853 ORTHO05D004171 1.6e-12 77.0 113 46.0
C08p16400 Brassica napus HOM05D003853 ORTHO05D004171 1.6e-12 77.0 113 46.0
ECA234G0349 Erigeron canadensis HOM05D003853 ORTHO05D004171 1.6e-12 77.0 75 54.7
VMungo0251G2653 Vigna mungo HOM05D003853 ORTHO05D004171 1.6e-12 77.0 69 59.4
Actinidia12318 Actinidia chinensis HOM05D003853 ORTHO05D004171 2.1e-12 76.6 74 59.5
CSS0045101 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 2.7e-12 76.3 101 58.4
Ah.03g139150 Amaranthus hybridus HOM05D003853 ORTHO05D004171 3.6e-12 75.9 125 40.8
BolC8t49264H Brassica oleracea HOM05D003853 ORTHO05D004171 3.6e-12 75.9 113 45.1
SGA_v2.0_scaffold287G47154 Striga asiatica HOM05D003853 ORTHO05D004171 3.6e-12 75.9 113 44.2
SalBow2G1698 Salvia bowleyana HOM05D003853 ORTHO05D004171 4.7e-12 75.5 170 35.3
Ah.02g126530 Amaranthus hybridus HOM05D003853 ORTHO05D004171 6.1e-12 75.1 76 57.9
PGSC0003DMG400028384 Solanum tuberosum HOM05D003853 ORTHO05D004171 8.0e-12 74.7 68 61.8
Lj4g0005239 Lotus japonicus HOM05D003853 ORTHO05D004171 1.4e-11 73.9 129 40.3
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 1.8e-11 73.6 72 52.8
COL.COLO4_27925 Corchorus olitorius HOM05D003853 ORTHO05D004171 1.8e-11 73.6 160 48.1
DCAR_027453 Daucus carota HOM05D003853 ORTHO05D004171 1.8e-11 73.6 131 40.5
Glyma.07G226567 Glycine max HOM05D003853 ORTHO05D004171 1.8e-11 73.6 69 58.0
Glyma.07G226633 Glycine max HOM05D003853 ORTHO05D004171 1.8e-11 73.6 69 58.0
Lalb_Chr05g0215091 Lupinus albus HOM05D003853 ORTHO05D004171 1.8e-11 73.6 69 58.0
SGA_v2.0_scaffold36G14434 Striga asiatica HOM05D003853 ORTHO05D004171 1.8e-11 73.6 109 45.0
Glyma.20G027200 Glycine max HOM05D003853 ORTHO05D004171 2.3e-11 73.2 69 58.0
PSO478G4998 Papaver somniferum HOM05D003853 ORTHO05D004171 2.3e-11 73.2 115 47.8
SalBow2G1975 Salvia bowleyana HOM05D003853 ORTHO05D004171 4.0e-11 72.4 166 34.3
Peaxi162Scf00314g00022 Petunia axillaris HOM05D003853 ORTHO05D004171 5.2e-11 72.0 73 57.5
PSO017G6890 Papaver somniferum HOM05D003853 ORTHO05D004171 6.8e-11 71.6 136 55.9
Sopen05g007400 Solanum pennellii HOM05D003853 ORTHO05D004171 6.8e-11 71.6 108 42.6
Lsat_1_v5_gn_4_11980 Lactuca sativa HOM05D003853 ORTHO05D004171 1.2e-10 70.9 78 46.2
Prupe.1G282500 Prunus persica HOM05D003853 ORTHO05D004171 1.5e-10 70.5 139 46.0
vmacro22356 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 1.5e-10 70.5 140 49.3
A08p32180 Brassica napus HOM05D003853 ORTHO05D004171 2.0e-10 70.1 123 52.8
AUR62007951 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.0e-10 70.1 67 59.7
Ca_04944_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 2.0e-10 70.1 145 38.6
SEGI_33923 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 2.6e-10 69.7 132 49.2
vmacro22354 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 2.6e-10 69.7 67 59.7
Zm00001eb007060 Zea mays HOM05D003853 ORTHO05D004171 2.6e-10 69.7 69 56.5
MSTRG.2322 Avicennia marina HOM05D003853 ORTHO05D004171 3.4e-10 69.3 110 40.0
Peaxi162Scf00314g00031 Petunia axillaris HOM05D003853 ORTHO05D004171 3.4e-10 69.3 116 44.0
Sed0019389 Sechium edule HOM05D003853 ORTHO05D004171 3.4e-10 69.3 132 48.5
BraA08t35141Z Brassica rapa HOM05D003853 ORTHO05D004171 4.4e-10 68.9 112 39.3
unitig_699.g19910 Utricularia gibba HOM05D003853 ORTHO05D004171 4.4e-10 68.9 111 39.6
Migut.E00060 Erythranthe guttata HOM05D003853 ORTHO05D004171 5.7e-10 68.6 172 34.9
Migut.L01216 Erythranthe guttata HOM05D003853 ORTHO05D004171 5.7e-10 68.6 165 31.5
HPP92_023639 Vanilla planifolia HOM05D003853 ORTHO05D004171 7.5e-10 68.2 91 41.8
Actinidia28167 Actinidia chinensis HOM05D003853 ORTHO05D004171 9.8e-10 67.8 67 58.2
AUR62003131 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.3e-09 67.4 67 56.7
MSTRG.735 Avicennia marina HOM05D003853 ORTHO05D004171 1.7e-09 67.0 70 55.7
SEGI_07999 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 1.7e-09 67.0 82 48.8
Ca_18813_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 2.2e-09 66.6 133 50.4
Nitab4.5_0000334g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 2.2e-09 66.6 153 32.7
Psat2g127960 Pisum sativum HOM05D003853 ORTHO05D004171 2.2e-09 66.6 123 41.5
ECA246G1290 Erigeron canadensis HOM05D003853 ORTHO05D004171 3.7e-09 65.9 71 53.5
Psat7g135240 Pisum sativum HOM05D003853 ORTHO05D004171 3.7e-09 65.9 78 51.3
MD13G1065700 Malus domestica HOM05D003853 ORTHO05D004171 4.9e-09 65.5 155 43.2
Lalb_Chr17g0341041 Lupinus albus HOM05D003853 ORTHO05D004171 6.3e-09 65.1 85 45.9
Medtr4g082830 Medicago truncatula HOM05D003853 ORTHO05D004171 8.3e-09 64.7 113 40.7
A08p32170 Brassica napus HOM05D003853 ORTHO05D004171 1.4e-08 63.9 73 46.6
HanXRQChr10g0308121 Helianthus annuus HOM05D003853 ORTHO05D004171 2.4e-08 63.2 130 34.6
Medtr4g082860 Medicago truncatula HOM05D003853 ORTHO05D004171 2.4e-08 63.2 76 51.3
Sc04g0007730 Simmondsia chinensis HOM05D003853 ORTHO05D004171 2.4e-08 63.2 122 39.3
TPR.G2267 Trifolium pratense HOM05D003853 ORTHO05D004171 2.4e-08 63.2 130 50.8
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 3.1e-08 62.8 75 48.0
CAN.G1340.8 Capsicum annuum HOM05D003853 ORTHO05D004171 4.1e-08 62.4 118 39.0
Psat7g135200 Pisum sativum HOM05D003853 ORTHO05D004171 4.1e-08 62.4 130 40.0
FAN12G3704 Fragaria x ananassa HOM05D002141 ORTHO05D002119 5.4e-08 62.0 104 40.4
MD16G1064200 Malus domestica HOM05D003853 ORTHO05D004171 5.4e-08 62.0 72 50.0
Os10g0330000 Oryza sativa ssp. japonica HOM05D003853 ORTHO05D004171 7.0e-08 61.6 76 44.7
CANSAT64G1198 Cannabis sativa HOM05D003853 ORTHO05D004171 9.1e-08 61.2 112 42.0
Lsat_1_v5_gn_3_56161 Lactuca sativa HOM05D003853 ORTHO05D004171 9.1e-08 61.2 70 50.0
FAN17G1589 Fragaria x ananassa HOM05D003853 ORTHO05D004171 1.6e-07 60.5 150 39.3
TPR.G34052 Trifolium pratense HOM05D003853 ORTHO05D004171 2.7e-07 59.7 71 52.1
TPR.G34063 Trifolium pratense HOM05D003853 ORTHO05D004171 2.7e-07 59.7 73 49.3
HPP92_023625 Vanilla planifolia HOM05D003853 ORTHO05D004171 2.7e-07 59.7 155 32.3
Solyc05g012570.3 Solanum lycopersicum HOM05D003853 ORTHO05D004171 4.5e-07 58.9 81 44.4
Zm00001eb334140 Zea mays HOM05D003853 ORTHO05D004171 1.0e-06 57.8 129 34.9
HanXRQChr15g0477051 Helianthus annuus HOM05D003853 ORTHO05D004171 2.3e-06 56.6 70 45.7
Lj2g0020869 Lotus japonicus HOM05D003853 ORTHO05D004171 2.9e-06 56.2 152 34.9
Pp3c22_17930 Physcomitrium patens HOM05D030757 ORTHO05D004171 3.8e-06 55.8 69 42.0
vmacro22463 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 3.8e-06 55.8 55 61.8


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