Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.6e-62 242.3 162 100.0
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.5e-38 163.3 146 65.8
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.3e-37 160.2 120 70.0
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 2.2e-37 159.5 115 69.6
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 6.5e-37 157.9 108 75.9
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-36 157.1 123 68.3
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 4.2e-36 155.2 118 66.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 7.2e-36 154.5 158 74.7
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.4e-36 154.1 118 68.6
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.1e-35 152.9 118 67.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.1e-35 152.9 110 72.7
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.7e-35 152.5 120 69.2
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.6e-35 152.1 124 68.5
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.0e-34 149.1 107 70.1
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 3.0e-34 149.1 123 65.0
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.9e-34 148.7 120 65.0
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 5.1e-34 148.3 118 67.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.7e-34 147.9 113 70.8
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 5.7e-33 144.8 116 69.8
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.3e-32 143.7 120 64.2
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.8e-32 142.5 115 61.7
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.8e-32 142.5 115 61.7
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.8e-32 142.5 115 61.7
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.8e-32 142.5 120 62.5
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-31 140.6 112 70.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-31 140.6 112 70.5
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.4e-31 140.2 111 69.4
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 3.1e-31 139.0 104 70.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.6e-30 136.7 112 68.8
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.6e-30 136.0 118 60.2
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 4.5e-30 135.2 118 65.3
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 4.5e-30 135.2 120 65.0
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.3e-29 133.7 115 61.7
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.7e-29 133.3 112 67.0
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.2e-29 132.9 120 60.8
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 2.2e-29 132.9 120 65.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.2e-29 132.9 160 67.5
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.1e-28 130.6 118 60.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.2e-28 127.9 120 55.8
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.6e-27 126.7 120 56.7
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 2.1e-27 126.3 148 67.6
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.6e-27 125.6 121 58.7
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 4.7e-27 125.2 110 61.8
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 6.1e-27 124.8 107 61.7
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 8.0e-27 124.4 120 55.8
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 5.2e-26 121.7 121 58.7
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 8.8e-26 120.9 120 54.2
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.0e-25 119.8 120 56.7
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-25 119.4 112 65.2
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 2.6e-25 119.4 115 56.5
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 3.3e-25 119.0 120 56.7
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 7.5e-25 117.9 117 56.4
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 9.7e-25 117.5 120 57.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.3e-24 117.1 121 52.1
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 2.2e-24 116.3 123 54.5
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.8e-24 115.2 120 52.5
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 8.2e-24 114.4 117 54.7
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 8.2e-24 114.4 114 56.1
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.8e-23 113.2 98 65.3
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 3.1e-23 112.5 118 53.4
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 4.1e-23 112.1 114 56.1
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 4.1e-23 112.1 118 54.2
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 5.3e-23 111.7 114 57.0
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.7e-22 109.4 111 55.9
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.7e-22 109.4 118 56.8
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 5.9e-22 108.2 117 56.4
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.3e-21 107.1 122 51.6
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.7e-21 106.7 116 49.1
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.7e-21 106.7 121 51.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 3.8e-21 105.5 120 51.7
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 5.0e-21 105.1 118 53.4
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 8.5e-21 104.4 116 50.0
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 8.5e-21 104.4 116 50.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.1e-20 104.0 99 53.5
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.9e-20 103.2 118 52.5
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.5e-20 102.8 121 49.6
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 3.2e-20 102.4 115 53.0
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 7.2e-20 101.3 116 50.0
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 9.4e-20 100.9 103 49.5
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 2.1e-19 99.8 96 58.3
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 2.7e-19 99.4 96 55.2
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 8.0e-19 97.8 107 56.1
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.0e-18 97.4 115 53.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 1.0e-18 97.4 116 46.6
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.8e-18 96.7 115 47.8
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.8e-18 96.7 113 53.1
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 2.3e-18 96.3 112 48.2
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.3e-18 96.3 65 73.8
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 2.3e-18 96.3 120 47.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 2.0e-17 93.2 102 50.0
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.6e-17 92.8 111 50.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 3.4e-17 92.4 120 47.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 3.4e-17 92.4 120 47.5
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 3.4e-17 92.4 118 48.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 5.7e-17 91.7 114 46.5
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.7e-16 90.1 96 51.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 8.3e-16 87.8 103 43.7
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.4e-15 87.0 116 46.6
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 3.1e-15 85.9 117 44.4
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 3.1e-15 85.9 114 46.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.1e-15 85.5 112 48.2
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 5.4e-15 85.1 112 48.2
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.0e-15 84.7 114 46.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.2e-14 84.0 121 40.5
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 1.2e-14 84.0 99 47.5
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.2e-14 84.0 112 47.3
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 2.7e-14 82.8 106 50.9
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.3e-13 80.5 118 43.2
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.7e-13 80.1 100 44.0
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.7e-13 80.1 111 39.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 2.9e-13 79.3 112 45.5
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 1.9e-12 76.6 96 41.7
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.9e-12 76.6 100 47.0
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 2.1e-11 73.2 105 43.8
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 6.1e-11 71.6 51 64.7
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 2.8e-08 62.8 114 35.1
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.2e-06 57.4 40 70.0
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.2e-06 57.4 112 34.8


User provided reference genes

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