Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 4.0e-99 364.8 186 100.0
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 3.8e-65 251.9 187 73.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.1e-63 244.6 186 71.5
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.3e-62 242.7 190 71.6
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.9e-56 223.0 189 66.1
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.1e-55 219.5 179 63.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 8.8e-54 214.2 188 62.8
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 7.4e-53 211.1 189 62.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 8.2e-52 207.6 177 65.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.8e-51 206.5 136 72.8
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 2.4e-51 206.1 186 64.5
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.4e-51 206.1 182 59.9
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.6e-50 202.6 128 77.3
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.6e-50 202.6 138 74.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 2.6e-50 202.6 194 58.8
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.5e-50 201.8 184 62.5
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 4.5e-50 201.8 179 63.7
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 7.7e-50 201.1 201 58.7
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.3e-49 200.3 201 57.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.7e-49 199.9 164 64.0
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 2.9e-49 199.1 183 56.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.8e-49 198.7 172 64.0
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 6.5e-49 198.0 172 62.8
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.1e-48 197.2 146 67.1
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.4e-48 196.8 136 70.6
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.4e-48 196.8 145 68.3
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.9e-48 196.4 186 58.6
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-48 196.4 190 57.9
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 4.2e-48 195.3 180 56.1
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 7.2e-48 194.5 138 68.8
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.2e-47 193.7 190 56.8
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.2e-47 193.7 190 56.8
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.7e-47 192.6 142 64.1
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 4.7e-47 191.8 194 55.7
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 6.1e-47 191.4 142 65.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 8.0e-47 191.0 194 55.7
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.0e-46 190.7 184 57.1
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.4e-46 190.3 181 55.2
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 2.3e-46 189.5 138 69.6
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 3.0e-46 189.1 141 70.2
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 5.2e-46 188.3 161 60.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 5.2e-46 188.3 142 68.3
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 6.7e-46 188.0 186 54.8
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.7e-46 188.0 187 56.7
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.0e-45 186.4 162 58.0
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.0e-45 186.4 162 58.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.6e-45 186.0 186 53.8
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.3e-45 185.7 129 71.3
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 3.3e-45 185.7 180 55.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 9.7e-45 184.1 123 69.1
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 2.8e-44 182.6 187 54.0
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 2.8e-44 182.6 144 64.6
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 3.7e-44 182.2 204 51.0
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 3.7e-44 182.2 146 65.8
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 6.3e-44 181.4 185 55.1
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 6.3e-44 181.4 189 53.4
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 8.2e-44 181.0 186 54.3
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.1e-43 180.6 180 56.1
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.4e-43 179.5 123 69.1
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.1e-43 179.1 135 65.9
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.1e-43 179.1 158 60.8
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 4.1e-43 178.7 185 53.0
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 5.3e-43 178.3 140 63.6
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.6e-42 176.8 192 51.6
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.0e-42 176.4 188 55.9
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 2.6e-42 176.0 186 53.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.5e-42 175.6 120 69.2
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 3.5e-42 175.6 120 69.2
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.5e-42 175.6 134 65.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.0e-41 174.1 123 68.3
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.7e-41 173.3 119 70.6
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 2.2e-41 172.9 140 65.7
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 2.2e-41 172.9 191 55.0
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 2.9e-41 172.6 188 52.1
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 5.0e-41 171.8 142 59.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.5e-41 171.0 143 63.6
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 8.5e-41 171.0 129 62.0
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 8.5e-41 171.0 139 66.2
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-40 170.6 140 65.0
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.1e-40 170.6 123 63.4
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.9e-40 169.9 129 65.9
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.5e-40 169.5 138 64.5
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 7.2e-40 167.9 140 65.0
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 7.2e-40 167.9 137 62.8
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.7e-39 166.0 126 61.9
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 6.1e-39 164.9 166 56.6
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.4e-38 163.7 137 62.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.4e-38 163.7 137 62.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.4e-38 163.7 137 62.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.4e-38 163.7 137 62.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.4e-38 163.7 137 62.0
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.4e-38 163.7 145 60.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 3.0e-38 162.5 143 60.1
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.0e-38 162.2 138 60.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.5e-37 160.2 120 66.7
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.8e-36 155.2 103 69.9
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 4.1e-35 152.1 120 57.5
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 9.1e-35 151.0 116 60.3
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.9e-33 146.0 99 67.7
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 9.4e-32 141.0 147 49.7
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 5.7e-29 131.7 128 62.5
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.2e-28 129.8 112 62.5
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.2e-28 129.8 112 62.5
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.2e-28 129.8 112 62.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 9.1e-27 124.4 106 63.2
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.5e-24 116.3 121 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 6.8e-22 108.2 142 45.8
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.2e-21 107.5 80 61.2
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.8e-19 100.1 146 42.5
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.9e-17 92.4 122 42.6
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.1e-16 90.9 114 41.2
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.0e-13 80.1 70 58.6
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-11 73.6 50 64.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 7.3e-08 61.6 137 36.5
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 4.7e-07 58.9 70 47.1


User provided reference genes

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