Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 3.6e-143 511.5 253 100.0
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 4.6e-90 335.1 282 67.7
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.7e-79 300.1 263 63.9
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.2e-76 289.7 277 59.6
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 3.6e-74 282.3 277 59.9
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 8.2e-71 271.2 275 56.0
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 7.0e-70 268.1 251 59.8
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.7e-68 263.5 278 55.0
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.7e-68 263.5 278 55.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.7e-68 263.5 277 56.0
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.2e-68 263.1 293 52.2
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.9e-67 260.0 275 54.9
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 2.5e-67 259.6 271 53.9
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 3.2e-67 259.2 275 53.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 4.2e-67 258.8 273 52.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.5e-67 258.5 275 53.5
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.5e-67 258.5 275 53.5
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 9.4e-67 257.7 277 54.5
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.6e-66 256.9 286 52.4
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.6e-66 256.9 275 54.2
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.6e-66 256.9 277 55.2
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.6e-66 256.9 275 53.1
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.1e-66 256.5 275 53.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 2.7e-66 256.1 282 54.3
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.6e-66 255.8 275 52.7
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 3.6e-66 255.8 277 54.9
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.6e-66 255.8 273 53.8
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 6.1e-66 255.0 275 54.5
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 8.0e-66 254.6 279 52.7
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.0e-66 254.6 275 52.7
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.0e-65 254.2 275 52.0
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.4e-65 253.8 280 52.5
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.3e-65 253.1 281 53.4
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 3.0e-65 252.7 276 52.2
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 5.2e-65 251.9 279 52.0
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 8.8e-65 251.1 279 52.0
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 8.8e-65 251.1 279 51.3
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 8.8e-65 251.1 277 50.9
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.2e-64 250.8 263 54.0
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.5e-64 250.4 273 52.0
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.5e-64 250.4 281 52.0
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.0e-64 250.0 273 51.6
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.6e-64 249.6 281 51.2
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 4.4e-64 248.8 273 51.3
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 7.5e-64 248.1 275 53.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.3e-63 247.3 279 51.3
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.2e-63 246.5 273 51.6
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 3.7e-63 245.7 273 51.3
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 4.8e-63 245.4 268 50.7
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 8.2e-63 244.6 275 51.6
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.1e-62 244.2 273 51.6
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.8e-62 243.4 275 50.9
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.4e-62 243.0 277 50.9
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.1e-62 242.3 275 51.6
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.3e-62 241.9 275 51.6
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 5.3e-62 241.9 273 50.5
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.2e-61 240.7 268 50.0
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.0e-61 240.0 275 49.5
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 3.5e-61 239.2 275 51.6
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 4.5e-61 238.8 299 49.2
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 4.5e-61 238.8 275 51.3
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 5.9e-61 238.4 277 50.2
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 7.7e-61 238.0 259 52.5
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 2.9e-60 236.1 276 50.4
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.9e-60 236.1 280 49.6
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.8e-60 235.7 276 49.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 5.0e-60 235.3 288 47.2
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 5.0e-60 235.3 274 48.5
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 6.5e-60 235.0 279 49.5
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 8.5e-60 234.6 280 49.3
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.1e-59 234.2 268 50.4
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.5e-59 233.8 272 51.1
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.9e-59 233.4 275 48.0
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.2e-59 232.6 279 48.4
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 4.2e-59 232.3 280 50.0
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 9.4e-59 231.1 273 48.7
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 3.6e-58 229.2 277 49.1
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.2e-56 224.2 254 49.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.2e-56 224.2 287 45.3
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 3.4e-56 222.6 270 48.1
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.8e-54 216.9 246 51.6
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 7.0e-54 214.9 198 58.6
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.0e-52 211.1 257 49.0
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.3e-52 210.7 271 48.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.3e-52 209.9 261 47.1
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 6.5e-52 208.4 370 38.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.5e-51 207.2 208 55.3
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 6.1e-50 201.8 256 47.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 8.9e-49 198.0 275 44.7
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 7.0e-46 188.3 229 51.5
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 4.7e-42 175.6 278 41.4
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 9.2e-38 161.4 281 39.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.6e-37 160.6 273 38.5
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.0e-36 157.9 137 61.3
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 4.7e-34 149.1 269 38.7
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 7.5e-32 141.7 267 37.8
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 7.8e-29 131.7 276 35.9
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 6.6e-28 128.6 106 60.4
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.1e-26 123.6 294 34.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.7e-23 114.0 135 49.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.2e-18 97.8 203 33.5
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.8e-17 92.0 54 77.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.8e-16 89.0 119 37.8
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 8.7e-12 75.1 125 38.4
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.1e-11 74.7 205 32.7
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.2e-08 64.7 52 59.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.7e-07 60.8 40 62.5


User provided reference genes

Program Settings