Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p069756 Quercus lobata HOM05D012615 ORTHO05D005932 3.9e-146 521.5 284 100.0
QL03p069741 Quercus lobata HOM05D009095 ORTHO05D005932 3.3e-52 209.5 133 93.2
QL02p008132 Quercus lobata HOM05D012615 ORTHO05D010044 7.7e-25 118.6 145 44.8
QL09p000952 Quercus lobata HOM05D012615 ORTHO05D010044 1.0e-24 118.2 139 49.6
QL01p035229 Quercus lobata HOM05D012615 ORTHO05D010044 1.9e-23 114.0 132 50.0
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 1.9e-23 114.0 132 51.5
Haze_11958 Corylus avellana HOM05D009095 ORTHO05D005932 5.7e-20 102.4 106 58.5
QL02p008192 Quercus lobata HOM05D012615 ORTHO05D010044 1.3e-19 101.3 142 44.4
QL02p008363 Quercus lobata HOM05D012615 ORTHO05D010044 4.5e-17 92.8 142 41.5
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 7.7e-17 92.0 168 35.7
QL02p008120 Quercus lobata HOM05D012615 ORTHO05D010044 1.0e-16 91.7 142 40.8
CiPaw.06G088700 Carya illinoinensis HOM05D009095 ORTHO05D005932 1.6e-14 84.3 99 56.6
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 6.1e-14 82.4 159 36.5
Dinv34096 Davidia involucrata HOM05D009095 ORTHO05D005932 1.0e-13 81.6 105 45.7
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 5.2e-13 79.3 117 37.6
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 1.5e-12 77.8 134 35.8
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 1.1e-10 71.6 96 43.8
PSO620G0001 Papaver somniferum HOM05D008191 ORTHO05D010044 1.8e-10 70.9 128 34.4
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 1.8e-10 70.9 134 34.3
COL.COLO4_23185 Corchorus olitorius HOM05D008191 ORTHO05D010044 5.3e-10 69.3 121 34.7
RcHm_v2.0_Chr3g0486661 Rosa chinensis HOM05D008191 ORTHO05D010044 7.0e-10 68.9 125 34.4
PSO724G1245 Papaver somniferum HOM05D008191 ORTHO05D010044 9.1e-10 68.6 128 33.6
Manes.05G106200 Manihot esculenta HOM05D009095 ORTHO05D005932 1.6e-09 67.8 110 46.4
Ciclev10024443m.g Citrus clementina HOM05D008191 ORTHO05D010044 2.6e-09 67.0 135 27.4
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 3.8e-08 63.2 150 31.3
Cpa.g.c38098 Carica papaya HOM05D009095 ORTHO05D005932 5.0e-08 62.8 94 39.4
arahy.Tifrunner.gnm1.ann1.3IH7MW Arachis hypogaea HOM05D013667 ORTHO05D005932 4.2e-07 59.7 92 43.5
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 4.2e-07 59.7 118 33.9
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 5.5e-07 59.3 99 38.4
TPR.G34048 Trifolium pratense HOM05D013667 ORTHO05D005932 9.4e-07 58.5 103 39.8
Medtr4g082330 Medicago truncatula HOM05D013667 ORTHO05D005932 1.2e-06 58.2 88 39.8
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 1.6e-06 57.8 112 38.4
Thecc.02G339500 Theobroma cacao HOM05D009095 ORTHO05D005932 1.6e-06 57.8 76 44.7
Phvul.002G169000 Phaseolus vulgaris HOM05D013667 ORTHO05D005932 3.6e-06 56.6 97 40.2
Atru.chr11.1719 Acer truncatum HOM05D009095 ORTHO05D005932 4.7e-06 56.2 70 47.1
CSS0039450 Camellia sinensis var. sinensis HOM05D009095 ORTHO05D005932 4.7e-06 56.2 96 39.6
TAR622G0621 Trochodendron aralioides HOM05D034691 ORTHO05D005932 4.7e-06 56.2 100 41.0
Ciclev10032785m.g Citrus clementina HOM05D009095 ORTHO05D005932 6.1e-06 55.8 80 45.0
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 8.0e-06 55.5 108 33.3


User provided reference genes

Program Settings