Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 3.6e-189 664.8 361 100.0
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.2e-107 394.0 369 63.4
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 4.6e-107 392.1 422 57.8
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.1e-98 362.1 376 57.2
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 7.3e-97 358.2 371 57.1
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.9e-93 346.3 374 55.9
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.1e-92 344.4 370 55.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.2e-92 342.8 360 55.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 5.4e-92 342.0 377 55.2
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 7.1e-92 341.7 361 55.4
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 7.8e-91 338.2 380 53.2
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 2.3e-90 336.7 367 56.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.5e-89 334.0 361 57.1
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.5e-89 334.0 365 52.6
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.5e-89 333.2 361 55.1
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.5e-89 333.2 368 53.3
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 7.3e-89 331.6 369 55.6
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.6e-89 331.3 367 54.2
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 2.1e-88 330.1 361 54.6
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 3.6e-88 329.3 375 52.3
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 8.1e-88 328.2 365 53.7
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-87 327.8 367 52.0
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 1.4e-87 327.4 393 53.7
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.4e-87 327.4 378 54.0
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 4.0e-87 325.9 370 55.4
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 5.2e-87 325.5 375 52.0
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 5.2e-87 325.5 367 51.2
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 8.9e-87 324.7 365 52.3
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.5e-86 323.9 362 52.8
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 2.6e-86 323.2 362 53.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 4.4e-86 322.4 371 53.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 4.4e-86 322.4 367 55.0
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 7.6e-86 321.6 367 55.0
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 7.6e-86 321.6 364 56.0
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 9.9e-86 321.2 361 52.9
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.3e-85 320.9 375 54.1
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.7e-85 320.5 356 54.2
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.7e-85 320.5 367 54.8
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 6.4e-85 318.5 363 52.3
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 8.4e-85 318.2 361 51.2
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.1e-84 317.8 366 53.3
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.4e-84 316.6 367 54.8
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 9.3e-84 314.7 370 52.4
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 1.2e-83 314.3 365 54.2
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 1.2e-83 314.3 364 51.6
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.6e-83 313.9 368 52.4
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.1e-83 313.5 277 62.1
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.7e-83 313.2 362 50.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 3.5e-83 312.8 362 51.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 6.0e-83 312.0 277 61.4
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 3.0e-82 309.7 361 50.7
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 3.9e-82 309.3 363 51.8
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.5e-81 307.4 373 53.1
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.9e-81 307.0 361 50.7
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.6e-80 303.9 364 51.4
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 3.6e-80 302.8 361 50.4
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 4.8e-80 302.4 360 53.1
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 4.8e-80 302.4 361 52.6
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.4e-79 300.8 377 50.9
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.4e-79 300.1 362 51.1
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 2.0e-78 297.0 361 51.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.7e-77 293.9 358 48.9
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.4e-76 290.8 356 50.0
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 3.2e-76 289.7 275 59.6
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 5.4e-76 288.9 277 57.4
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 9.3e-76 288.1 366 49.5
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.2e-75 287.7 356 48.6
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 1.6e-75 287.3 362 50.3
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.7e-75 286.6 275 58.2
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 4.6e-75 285.8 277 56.7
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 6.0e-75 285.4 374 51.9
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.0e-74 284.6 378 46.6
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.1e-73 281.2 159 84.9
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.5e-73 280.0 277 56.0
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 7.4e-73 278.5 275 57.1
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.6e-72 277.3 301 51.5
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 2.8e-72 276.6 362 49.4
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 3.6e-72 276.2 369 49.6
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.4e-71 274.2 381 48.3
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.8e-71 273.9 366 47.0
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.8e-71 273.9 359 46.5
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 2.4e-71 273.5 362 49.4
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.1e-71 273.1 372 48.1
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.2e-70 271.2 275 55.6
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.9e-69 266.5 359 46.8
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 4.9e-69 265.8 372 48.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 4.2e-68 262.7 369 46.6
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 3.5e-67 259.6 363 49.0
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.0e-66 258.1 356 46.3
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.0e-66 258.1 154 81.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 5.6e-65 252.3 274 50.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 4.8e-64 249.2 272 51.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 9.0e-63 245.0 272 51.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 3.8e-61 239.6 360 42.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 5.5e-60 235.7 167 72.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 5.5e-60 235.7 321 49.8
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 9.0e-55 218.4 282 46.8
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.5e-54 216.1 133 83.5
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.2e-53 213.8 130 80.0
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.4e-52 211.1 324 43.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.2e-48 197.2 363 40.5
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 5.0e-45 186.0 397 37.3
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.0e-42 176.8 285 45.3
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.8e-40 170.2 181 52.5
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 4.1e-39 166.4 274 41.2
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.1e-35 154.1 194 49.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.9e-29 133.7 254 39.8
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.2e-28 129.8 96 68.8
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.4e-26 124.8 79 73.4
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 4.1e-23 113.2 75 73.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.5e-22 110.2 266 37.2
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 4.5e-22 109.8 209 36.4
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.0e-14 84.3 142 42.3
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.9e-13 80.5 61 67.2
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.6e-11 74.7 83 44.6
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 2.8e-11 73.9 181 32.6
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 2.0e-09 67.8 65 56.9
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.2e-08 64.3 41 73.2
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 6.3e-08 62.8 42 69.0
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.4e-07 61.6 59 57.6
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.8e-07 61.2 37 73.0


User provided reference genes

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