Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.2e-298 1028.1 491 100.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 3.7e-293 1010.7 486 99.4
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-247 859.8 469 88.5
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.3e-242 842.0 484 83.3
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.6e-238 828.6 461 86.1
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 4.6e-235 817.8 480 84.6
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.1e-223 780.0 482 78.4
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 7.4e-193 677.6 486 67.9
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.4e-191 673.3 486 68.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.4e-182 642.1 484 67.8
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.1e-178 628.2 501 65.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 6.7e-178 627.9 490 66.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 8.8e-178 627.5 487 66.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.4e-177 625.2 484 66.3
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-173 614.0 485 66.0
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 2.9e-173 612.5 484 65.5
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.2e-172 609.0 484 65.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.5e-172 608.2 485 64.9
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 7.2e-172 607.8 495 63.0
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 7.2e-172 607.8 489 63.0
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.3e-168 594.7 455 64.6
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.5e-164 583.6 490 61.4
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.5e-164 583.6 490 61.4
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-161 573.9 416 67.1
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.4e-161 572.4 447 66.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.8e-160 569.3 503 58.4
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 2.4e-159 566.2 497 56.9
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 5.3e-159 565.1 504 58.5
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.2e-158 563.9 494 60.3
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 8.5e-157 557.8 504 57.7
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.2e-156 555.8 494 58.3
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 2.1e-155 553.1 498 57.2
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 4.7e-155 552.0 502 56.6
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 6.1e-155 551.6 490 59.6
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 6.8e-154 548.1 495 58.4
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 4.4e-153 545.4 497 56.3
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.3e-152 543.9 502 57.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.1e-151 539.3 496 56.0
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.5e-150 535.8 492 56.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.5e-150 535.8 493 55.6
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-149 534.3 494 55.3
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.9e-149 532.7 499 53.9
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.1e-148 530.8 511 55.4
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-148 529.6 496 54.6
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.5e-148 529.6 498 55.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 3.3e-148 529.3 429 61.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.3e-148 529.3 495 54.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.2e-147 527.3 495 56.4
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.1e-147 526.6 499 53.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.6e-147 525.8 417 63.1
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 6.1e-147 525.0 487 54.6
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 7.5e-145 518.1 503 54.1
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 9.8e-145 517.7 459 58.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.1e-143 514.2 493 56.0
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.2e-142 510.8 453 56.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.6e-142 510.4 498 54.4
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.0e-142 510.0 420 60.2
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.7e-141 506.9 507 52.3
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.6e-141 505.0 488 54.7
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 4.3e-140 502.3 494 53.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.6e-140 501.9 361 68.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 9.5e-140 501.1 478 54.2
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 4.0e-138 495.7 401 62.3
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 2.0e-137 493.4 412 60.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 8.3e-136 488.0 486 52.9
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 4.1e-135 485.7 433 57.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 5.4e-135 485.3 376 61.2
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.2e-134 484.2 488 52.5
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.2e-134 484.2 428 57.2
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.3e-133 480.7 484 51.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.3e-133 479.9 430 57.9
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 7.3e-132 474.9 445 55.7
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 7.3e-132 474.9 434 55.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.6e-131 472.6 473 54.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 5.2e-130 468.8 484 52.3
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.4e-129 466.1 429 55.2
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 4.4e-129 465.7 416 55.8
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 7.5e-129 464.9 373 60.9
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 8.3e-128 461.5 425 55.5
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.2e-127 459.5 425 55.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.3e-125 454.1 427 54.1
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.3e-125 453.4 431 54.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.1e-125 452.2 402 56.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 3.6e-123 446.0 424 54.7
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.4e-122 444.1 421 55.1
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.8e-122 443.7 403 56.6
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 2.3e-122 443.4 424 54.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.3e-122 443.4 465 51.0
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.2e-121 441.0 402 55.2
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.4e-121 439.1 432 54.2
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 5.8e-121 438.7 424 55.0
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.2e-120 436.8 428 54.9
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.2e-120 436.8 428 54.9
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.2e-120 436.8 428 54.9
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.9e-120 436.4 433 54.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 8.3e-120 434.9 469 49.5
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.1e-118 430.3 408 51.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.4e-114 416.8 410 52.4
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-100 370.5 433 43.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-92 343.6 492 42.1
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 4.6e-86 322.8 332 54.8
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.8e-82 310.8 361 46.3
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 7.4e-76 288.9 389 43.7
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.3e-75 288.1 260 56.2
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.3e-72 278.1 206 61.2
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.6e-70 271.2 274 54.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 6.9e-66 255.8 476 35.7
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 7.2e-63 245.7 504 34.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.0e-56 225.3 310 43.2
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.8e-51 207.2 388 33.8
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 9.1e-42 175.6 222 45.0
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-34 151.4 375 31.5
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 5.4e-34 149.8 375 31.7
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 3.5e-33 147.1 110 65.5
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.4e-29 135.2 132 52.3
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.8e-29 134.8 140 52.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.0e-28 131.3 414 28.0
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.5e-28 129.4 396 31.3
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-27 128.6 335 34.6
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.1e-23 115.5 268 34.0
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 9.2e-18 95.9 52 78.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.7e-08 65.1 46 60.9


User provided reference genes

Program Settings