Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.2e-28 129.4 81 100.0
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 9.8e-26 119.8 81 80.2
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 3.2e-16 88.2 54 74.1
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.4e-16 87.4 52 78.8
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 7.0e-16 87.0 54 72.2
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.0e-15 85.5 76 56.6
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 3.5e-15 84.7 54 72.2
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 3.5e-15 84.7 52 76.9
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 4.6e-15 84.3 54 72.2
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 6.0e-15 84.0 77 57.1
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.0e-14 83.2 52 76.9
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.7e-14 82.4 54 72.2
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 2.3e-14 82.0 52 71.2
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 3.0e-14 81.6 78 51.3
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.9e-14 81.3 52 71.2
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 3.9e-14 81.3 54 66.7
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 8.6e-14 80.1 54 68.5
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 8.6e-14 80.1 54 68.5
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 8.6e-14 80.1 79 57.0
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 8.6e-14 80.1 54 70.4
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 8.6e-14 80.1 54 70.4
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-13 79.7 52 63.5
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.1e-13 79.7 52 63.5
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.1e-13 79.7 54 64.8
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.5e-13 79.3 54 70.4
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.5e-13 79.3 81 54.3
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.5e-13 79.3 52 69.2
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.5e-13 79.3 52 69.2
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.5e-13 79.3 52 67.3
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.9e-13 79.0 81 46.9
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.9e-13 79.0 52 71.2
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.5e-13 78.6 54 68.5
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 4.3e-13 77.8 81 56.8
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.3e-13 77.8 81 50.6
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.3e-13 77.8 54 66.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 5.6e-13 77.4 54 63.0
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.6e-13 77.4 52 61.5
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 5.6e-13 77.4 81 50.6
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 7.3e-13 77.0 81 51.9
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 7.3e-13 77.0 54 64.8
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 7.3e-13 77.0 54 66.7
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 9.5e-13 76.6 54 64.8
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 9.5e-13 76.6 54 64.8
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 9.5e-13 76.6 54 64.8
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.2e-12 76.3 54 64.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.6e-12 75.9 54 57.4
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 2.1e-12 75.5 52 61.5
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 2.1e-12 75.5 54 66.7
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.8e-12 75.1 54 63.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 3.6e-12 74.7 54 61.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 3.6e-12 74.7 55 61.8
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 4.7e-12 74.3 49 63.3
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 4.7e-12 74.3 54 63.0
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 6.2e-12 73.9 54 59.3
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 6.2e-12 73.9 49 63.3
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 6.2e-12 73.9 49 63.3
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 8.1e-12 73.6 54 64.8
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.4e-11 72.8 54 55.6
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.8e-11 72.4 54 55.6
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.8e-11 72.4 54 55.6
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.8e-11 72.4 54 64.8
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.3e-11 72.0 52 59.6
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.3e-11 72.0 54 61.1
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 3.1e-11 71.6 54 57.4
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 4.0e-11 71.2 49 59.2
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 4.0e-11 71.2 49 59.2
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 4.0e-11 71.2 49 59.2
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 4.0e-11 71.2 53 64.2
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.0e-11 71.2 54 63.0
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 5.2e-11 70.9 82 45.1
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 8.9e-11 70.1 54 61.1
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.2e-10 69.7 54 63.0
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.2e-10 69.7 54 63.0
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.5e-10 69.3 54 63.0
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.6e-10 68.6 52 57.7
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 3.4e-10 68.2 54 61.1
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.4e-10 68.2 54 66.7
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.4e-10 68.2 54 57.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 3.4e-10 68.2 54 55.6
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 3.4e-10 68.2 80 47.5
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 4.4e-10 67.8 54 59.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 9.9e-10 66.6 54 55.6
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 9.9e-10 66.6 54 59.3
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.3e-09 66.2 54 53.7
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 2.2e-09 65.5 54 55.6
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.2e-09 65.5 54 55.6
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 4.9e-09 64.3 45 66.7
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 6.4e-09 63.9 52 57.7
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 6.4e-09 63.9 54 55.6
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 8.3e-09 63.5 54 53.7
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.4e-08 62.8 83 44.6
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.4e-08 62.8 54 48.1
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 4.1e-08 61.2 52 55.8
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 9.2e-08 60.1 53 50.9
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 1.6e-07 59.3 54 51.9
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 2.1e-07 58.9 52 48.1
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 2.1e-07 58.9 81 42.0
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.7e-07 58.5 54 48.1
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.5e-07 58.2 54 53.7
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.5e-07 58.2 77 44.2
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 6.0e-07 57.4 52 55.8
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 6.0e-07 57.4 53 45.3
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 6.0e-07 57.4 54 53.7
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 6.0e-07 57.4 54 51.9
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.0e-06 56.6 50 50.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 1.3e-06 56.2 54 51.9
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.7e-06 55.8 53 47.2
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.7e-06 55.8 81 40.7
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 2.3e-06 55.5 52 48.1
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 2.3e-06 55.5 50 48.0
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 2.3e-06 55.5 52 51.9
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 3.0e-06 55.1 51 51.0
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 3.9e-06 54.7 50 48.0
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.9e-06 54.7 54 51.9
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 5.1e-06 54.3 50 46.0
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 5.1e-06 54.3 50 46.0
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 5.1e-06 54.3 54 40.7


User provided reference genes

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